RNA–Protein interactions for RNA: ENST00000420042.1

RARA-205, Transcript of retinoic acid receptor alpha, humanhuman

TSL 3

Gene RARA, Length 1,052 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-205ENST00000420042 TPTE2Q6XPS3 522 aa19.9■□□□□ 0.78
RARA-205ENST00000420042 CNKSR1Q969H4 720 aa19.9■□□□□ 0.78
RARA-205ENST00000420042 ZNF219Q9P2Y4 722 aaPredicted RBP19.9■□□□□ 0.78
RARA-205ENST00000420042 C21orf2O43822 256 aa19.89■□□□□ 0.77
RARA-205ENST00000420042 STYK1Q6J9G0 422 aa19.89■□□□□ 0.77
RARA-205ENST00000420042 DLEC1Q9Y238 1755 aa19.89■□□□□ 0.77
RARA-205ENST00000420042 RRP7AQ9Y3A4 280 aaKnown RBP19.89■□□□□ 0.77
RARA-205ENST00000420042 BCORQ6W2J9 1755 aa19.88■□□□□ 0.77
RARA-205ENST00000420042 ZC3H4Q9UPT8 1303 aaKnown RBP19.88■□□□□ 0.77
RARA-205ENST00000420042 SRGNP10124 158 aa19.88■□□□□ 0.77
RARA-205ENST00000420042 LMOD3Q0VAK6 560 aa19.88■□□□□ 0.77
RARA-205ENST00000420042 MASTLQ96GX5 879 aa19.88■□□□□ 0.77
RARA-205ENST00000420042 TSPYL4Q9UJ04 414 aa19.88■□□□□ 0.77
RARA-205ENST00000420042 DLG5Q8TDM6 1919 aa19.88■□□□□ 0.77
RARA-205ENST00000420042 FAM177BA6PVY3 158 aa19.87■□□□□ 0.77
RARA-205ENST00000420042 HLFQ16534 295 aa19.87■□□□□ 0.77
RARA-205ENST00000420042 RRAGCQ9HB90 399 aa19.87■□□□□ 0.77
RARA-205ENST00000420042 NFKBIEO00221 500 aa19.86■□□□□ 0.77
RARA-205ENST00000420042 MYL6BP14649 208 aa19.86■□□□□ 0.77
RARA-205ENST00000420042 GTF2E1P29083 439 aaPredicted RBP19.86■□□□□ 0.77
RARA-205ENST00000420042 TMPOP42166 694 aaKnown RBP19.86■□□□□ 0.77
RARA-205ENST00000420042 WDR43Q15061 677 aaKnown RBP eCLIP19.86■□□□□ 0.77
RARA-205ENST00000420042 KIF6Q6ZMV9 814 aa19.86■□□□□ 0.77
RARA-205ENST00000420042 ANKRD31Q8N7Z5 1873 aa19.86■□□□□ 0.77
RARA-205ENST00000420042 KDM3BQ7LBC6 1761 aa19.85■□□□□ 0.77
RARA-205ENST00000420042 ERVV-1B6SEH8 477 aa19.85■□□□□ 0.77
RARA-205ENST00000420042 PRELPP51888 382 aa19.85■□□□□ 0.77
RARA-205ENST00000420042 SOGA3Q5TF21 947 aa19.85■□□□□ 0.77
RARA-205ENST00000420042 PRPF40BQ6NWY9 871 aaKnown RBP19.85■□□□□ 0.77
RARA-205ENST00000420042 NEUROD2Q15784 382 aa19.84■□□□□ 0.77
RARA-205ENST00000420042 CCDC146Q8IYE0 955 aa19.84■□□□□ 0.77
RARA-205ENST00000420042 RBM46Q8TBY0 533 aaKnown RBP19.84■□□□□ 0.77
RARA-205ENST00000420042 BABAM1Q9NWV8 329 aa19.84■□□□□ 0.77
RARA-205ENST00000420042 LAMB4A4D0S4 1761 aa19.84■□□□□ 0.77
RARA-205ENST00000420042 MAP3K15Q6ZN16 1313 aa19.83■□□□□ 0.77
RARA-205ENST00000420042 GLTPD2A6NH11 291 aa19.83■□□□□ 0.77
RARA-205ENST00000420042 NPR1P16066 1061 aa19.83■□□□□ 0.77
RARA-205ENST00000420042 TAOK3Q9H2K8 898 aa19.83■□□□□ 0.77
RARA-205ENST00000420042 ERBB4Q15303 1308 aa19.82■□□□□ 0.76
RARA-205ENST00000420042 SBF1O95248 1867 aa19.82■□□□□ 0.76
RARA-205ENST00000420042 EIF2S2P20042 333 aaKnown RBP19.82■□□□□ 0.76
RARA-205ENST00000420042 DPY19L2Q6NUT2 758 aa19.82■□□□□ 0.76
RARA-205ENST00000420042 TTLL7Q6ZT98 887 aa19.82■□□□□ 0.76
RARA-205ENST00000420042 RUNDC1Q96C34 613 aa19.82■□□□□ 0.76
RARA-205ENST00000420042 NYXQ9GZU5 481 aa19.82■□□□□ 0.76
RARA-205ENST00000420042 COL11A2P13942 1736 aaPredicted RBP19.82■□□□□ 0.76
RARA-205ENST00000420042 KLRG2A4D1S0 409 aaPredicted RBP19.81■□□□□ 0.76
RARA-205ENST00000420042 APLP1P51693 650 aa19.81■□□□□ 0.76
RARA-205ENST00000420042 ERFEQ4G0M1 354 aa19.81■□□□□ 0.76
RARA-205ENST00000420042 ZBTB3Q9H5J0 574 aa19.81■□□□□ 0.76
RARA-205ENST00000420042 LTBP3Q9NS15 1303 aa19.8■□□□□ 0.76
RARA-205ENST00000420042 VEGFAP15692 232 aaPredicted RBP19.79■□□□□ 0.76
RARA-205ENST00000420042 ALDH1B1P30837 517 aa19.79■□□□□ 0.76
RARA-205ENST00000420042 FSTL1Q12841 308 aa19.79■□□□□ 0.76
RARA-205ENST00000420042 ADAMTS8Q9UP79 889 aa19.79■□□□□ 0.76
RARA-205ENST00000420042 GPTP24298 496 aa19.78■□□□□ 0.76
RARA-205ENST00000420042 CCDC93Q567U6 631 aa19.78■□□□□ 0.76
RARA-205ENST00000420042 NUTM1Q86Y26 1132 aa19.78■□□□□ 0.76
RARA-205ENST00000420042 PRKRIP1Q9H875 184 aaPredicted RBP19.78■□□□□ 0.76
RARA-205ENST00000420042 LAS1LQ9Y4W2 734 aaKnown RBP19.78■□□□□ 0.76
RARA-205ENST00000420042 GIGYF2Q6Y7W6 1299 aaKnown RBP19.77■□□□□ 0.76
RARA-205ENST00000420042 C7orf43Q8WVR3 580 aa19.77■□□□□ 0.76
RARA-205ENST00000420042 TNRC6CQ9HCJ0 1690 aaKnown RBP19.76■□□□□ 0.75
RARA-205ENST00000420042 SMC1BQ8NDV3 1235 aa19.76■□□□□ 0.75
RARA-205ENST00000420042 SLX4Q8IY92 1834 aa19.76■□□□□ 0.75
RARA-205ENST00000420042 PDIA6Q15084 440 aa19.75■□□□□ 0.75
RARA-205ENST00000420042 SUSD4Q5VX71 490 aa19.75■□□□□ 0.75
RARA-205ENST00000420042 ZNF34Q8IZ26 560 aa19.75■□□□□ 0.75
RARA-205ENST00000420042 NECTIN2Q92692 538 aa19.75■□□□□ 0.75
RARA-205ENST00000420042 TRIM35Q9UPQ4 493 aa19.75■□□□□ 0.75
RARA-205ENST00000420042 UBN2Q6ZU65 1347 aa19.75■□□□□ 0.75
RARA-205ENST00000420042 CHL1O00533 1208 aa19.74■□□□□ 0.75
RARA-205ENST00000420042 PPP1R42Q7Z4L9 355 aa19.74■□□□□ 0.75
RARA-205ENST00000420042 RTKN2Q8IZC4 609 aa19.74■□□□□ 0.75
RARA-205ENST00000420042 RPGRQ92834 1020 aaKnown RBP19.74■□□□□ 0.75
RARA-205ENST00000420042 TIAM2Q8IVF5 1701 aa19.73■□□□□ 0.75
RARA-205ENST00000420042 FER1L6Q2WGJ9 1857 aa19.73■□□□□ 0.75
RARA-205ENST00000420042 ABCC12Q96J65 1359 aa19.73■□□□□ 0.75
RARA-205ENST00000420042 IBTKQ9P2D0 1353 aaPredicted RBP19.73■□□□□ 0.75
RARA-205ENST00000420042 ANXA1P04083 346 aa19.73■□□□□ 0.75
RARA-205ENST00000420042 FKBP4Q02790 459 aaKnown RBP eCLIP19.73■□□□□ 0.75
RARA-205ENST00000420042 PROSER3Q2NL68 480 aa19.73■□□□□ 0.75
RARA-205ENST00000420042 CRY2Q49AN0 593 aa19.73■□□□□ 0.75
RARA-205ENST00000420042 PARP10Q53GL7 1025 aa19.73■□□□□ 0.75
RARA-205ENST00000420042 LRP10Q7Z4F1 713 aa19.73■□□□□ 0.75
RARA-205ENST00000420042 AIMP1Q12904 312 aaKnown RBP19.72■□□□□ 0.75
RARA-205ENST00000420042 CCDC88AQ3V6T2 1871 aa19.71■□□□□ 0.75
RARA-205ENST00000420042 ARFGEF2Q9Y6D5 1785 aa19.71■□□□□ 0.75
RARA-205ENST00000420042 NTSR2O95665 410 aa19.71■□□□□ 0.75
RARA-205ENST00000420042 OLFM4Q6UX06 510 aa19.71■□□□□ 0.75
RARA-205ENST00000420042 COPS6Q7L5N1 327 aa19.71■□□□□ 0.75
RARA-205ENST00000420042 ZNF277Q9NRM2 450 aaPredicted RBP19.71■□□□□ 0.75
RARA-205ENST00000420042 CACNA1SQ13698 1873 aa19.71■□□□□ 0.75
RARA-205ENST00000420042 NUP98P52948 1817 aa19.7■□□□□ 0.74
RARA-205ENST00000420042 DDNO94850 711 aaPredicted RBP19.7■□□□□ 0.74
RARA-205ENST00000420042 KRT24Q2M2I5 525 aa19.7■□□□□ 0.74
RARA-205ENST00000420042 HSP90AB3PQ58FF7 597 aa19.7■□□□□ 0.74
RARA-205ENST00000420042 XAGE3Q8WTP9 111 aa19.7■□□□□ 0.74
RARA-205ENST00000420042 RBM17Q96I25 401 aaKnown RBP19.7■□□□□ 0.74
RARA-205ENST00000420042 UTP14AQ9BVJ6 771 aaKnown RBP19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms