RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 ARHGAP45Q92619 1136 aa7.57□□□□□ -1.2
HMGB3-202ENST00000419110 TMOD3Q9NYL9 352 aa7.57□□□□□ -1.2
HMGB3-202ENST00000419110 MIS18AQ9NYP9 233 aa7.57□□□□□ -1.2
HMGB3-202ENST00000419110 PCDH10Q9P2E7 1040 aa7.57□□□□□ -1.2
HMGB3-202ENST00000419110 CIZ1Q9ULV3 898 aaPredicted RBP7.57□□□□□ -1.2
HMGB3-202ENST00000419110 HEG1Q9ULI3 1381 aa7.57□□□□□ -1.2
HMGB3-202ENST00000419110 CASZ1Q86V15 1759 aa7.56□□□□□ -1.2
HMGB3-202ENST00000419110 AFF2P51816 1311 aa7.56□□□□□ -1.2
HMGB3-202ENST00000419110 BCL9O00512 1426 aa7.56□□□□□ -1.2
HMGB3-202ENST00000419110 A0A0G2JS52 829 aa7.56□□□□□ -1.2
HMGB3-202ENST00000419110 MYT1Q01538 1121 aa7.56□□□□□ -1.2
HMGB3-202ENST00000419110 B4GALNT3Q6L9W6 998 aa7.56□□□□□ -1.2
HMGB3-202ENST00000419110 ZNF790Q6PG37 636 aa7.56□□□□□ -1.2
HMGB3-202ENST00000419110 DDX54Q8TDD1 881 aaKnown RBP7.56□□□□□ -1.2
HMGB3-202ENST00000419110 CLUAP1Q96AJ1 413 aa7.56□□□□□ -1.2
HMGB3-202ENST00000419110 FMNL2Q96PY5 1086 aa7.56□□□□□ -1.2
HMGB3-202ENST00000419110 USP21Q9UK80 565 aa7.56□□□□□ -1.2
HMGB3-202ENST00000419110 NOB1Q9ULX3 412 aaKnown RBP7.56□□□□□ -1.2
HMGB3-202ENST00000419110 COG6Q9Y2V7 657 aa7.56□□□□□ -1.2
HMGB3-202ENST00000419110 C4AP0C0L4 1744 aa7.55□□□□□ -1.2
HMGB3-202ENST00000419110 C4BP0C0L5 1744 aa7.55□□□□□ -1.2
HMGB3-202ENST00000419110 TNS1Q9HBL0 1735 aaKnown RBP7.55□□□□□ -1.2
HMGB3-202ENST00000419110 ERBB4Q15303 1308 aa7.55□□□□□ -1.2
HMGB3-202ENST00000419110 NUP98P52948 1817 aa7.55□□□□□ -1.2
HMGB3-202ENST00000419110 ATP10DQ9P241 1426 aa7.55□□□□□ -1.2
HMGB3-202ENST00000419110 AK9Q5TCS8 1911 aa7.55□□□□□ -1.2
HMGB3-202ENST00000419110 EXOC5O00471 708 aa7.55□□□□□ -1.2
HMGB3-202ENST00000419110 TCERG1O14776 1098 aaKnown RBP7.55□□□□□ -1.2
HMGB3-202ENST00000419110 PSEN1P49768 467 aa7.55□□□□□ -1.2
HMGB3-202ENST00000419110 MKRN3Q13064 507 aaKnown RBP7.55□□□□□ -1.2
HMGB3-202ENST00000419110 FNBP4Q8N3X1 1017 aaPredicted RBP7.55□□□□□ -1.2
HMGB3-202ENST00000419110 RLBP1P12271 317 aa7.54□□□□□ -1.2
HMGB3-202ENST00000419110 FLIIQ13045 1269 aa7.54□□□□□ -1.2
HMGB3-202ENST00000419110 FKBP5Q13451 457 aaPredicted RBP7.54□□□□□ -1.2
HMGB3-202ENST00000419110 TMEM57Q8N5G2 664 aa7.54□□□□□ -1.2
HMGB3-202ENST00000419110 CHPF2Q9P2E5 772 aa7.54□□□□□ -1.2
HMGB3-202ENST00000419110 DBF4Q9UBU7 674 aaPredicted RBP7.54□□□□□ -1.2
HMGB3-202ENST00000419110 KCNQ3O43525 872 aa7.53□□□□□ -1.2
HMGB3-202ENST00000419110 GIGYF1O75420 1035 aaPredicted RBP7.53□□□□□ -1.2
HMGB3-202ENST00000419110 SNRPA1P09661 255 aaKnown RBP7.53□□□□□ -1.2
HMGB3-202ENST00000419110 EIF2S2P20042 333 aaKnown RBP7.53□□□□□ -1.2
HMGB3-202ENST00000419110 CCT4P50991 539 aaKnown RBP7.53□□□□□ -1.2
HMGB3-202ENST00000419110 SLC39A6Q13433 755 aa7.53□□□□□ -1.2
HMGB3-202ENST00000419110 FAM98CQ17RN3 349 aaKnown RBP7.53□□□□□ -1.2
HMGB3-202ENST00000419110 CENPQQ7L2Z9 268 aaPredicted RBP7.53□□□□□ -1.2
HMGB3-202ENST00000419110 NFATC2IPQ8NCF5 419 aa7.53□□□□□ -1.2
HMGB3-202ENST00000419110 NECTIN2Q92692 538 aa7.53□□□□□ -1.2
HMGB3-202ENST00000419110 ZNF496Q96IT1 587 aaPredicted RBP7.53□□□□□ -1.2
HMGB3-202ENST00000419110 TRPC5Q9UL62 973 aaPredicted RBP7.53□□□□□ -1.2
HMGB3-202ENST00000419110 TNNQ9UQP3 1299 aa7.53□□□□□ -1.2
HMGB3-202ENST00000419110 MYH14Q7Z406 1995 aaKnown RBP7.52□□□□□ -1.21
HMGB3-202ENST00000419110 DDX58O95786 925 aaKnown RBP7.52□□□□□ -1.21
HMGB3-202ENST00000419110 SYTL4Q96C24 671 aaPredicted RBP7.52□□□□□ -1.21
HMGB3-202ENST00000419110 HYPKQ9NX55 129 aa7.52□□□□□ -1.21
HMGB3-202ENST00000419110 COL24A1Q17RW2 1714 aa7.52□□□□□ -1.21
HMGB3-202ENST00000419110 UBR3Q6ZT12 1888 aa7.51□□□□□ -1.21
HMGB3-202ENST00000419110 PALLDQ8WX93 1383 aa7.51□□□□□ -1.21
HMGB3-202ENST00000419110 TUBGCP6Q96RT7 1819 aa7.51□□□□□ -1.21
HMGB3-202ENST00000419110 PDAP1Q13442 181 aaKnown RBP7.51□□□□□ -1.21
HMGB3-202ENST00000419110 INTS3Q68E01 1043 aaKnown RBP7.51□□□□□ -1.21
HMGB3-202ENST00000419110 DDX21Q9NR30 783 aaKnown RBP eCLIP7.51□□□□□ -1.21
HMGB3-202ENST00000419110 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.51□□□□□ -1.21
HMGB3-202ENST00000419110 KDM2BQ8NHM5 1336 aa7.51□□□□□ -1.21
HMGB3-202ENST00000419110 SPEF2Q9C093 1822 aa7.5□□□□□ -1.21
HMGB3-202ENST00000419110 DDX60Q8IY21 1712 aaKnown RBP7.5□□□□□ -1.21
HMGB3-202ENST00000419110 ADCY9O60503 1353 aa7.5□□□□□ -1.21
HMGB3-202ENST00000419110 SLC4A10Q6U841 1118 aa7.5□□□□□ -1.21
HMGB3-202ENST00000419110 VSIG10Q8N0Z9 540 aa7.5□□□□□ -1.21
HMGB3-202ENST00000419110 PDCD7Q8N8D1 485 aaKnown RBP7.5□□□□□ -1.21
HMGB3-202ENST00000419110 IBTKQ9P2D0 1353 aaPredicted RBP7.49□□□□□ -1.21
HMGB3-202ENST00000419110 PTCD1O75127 700 aaKnown RBP7.49□□□□□ -1.21
HMGB3-202ENST00000419110 ZNF772Q68DY9 489 aaPredicted RBP7.49□□□□□ -1.21
HMGB3-202ENST00000419110 G2E3Q7L622 706 aa7.49□□□□□ -1.21
HMGB3-202ENST00000419110 MARCH10Q8NA82 808 aaPredicted RBP7.49□□□□□ -1.21
HMGB3-202ENST00000419110 DNAAF4Q8WXU2 420 aa7.49□□□□□ -1.21
HMGB3-202ENST00000419110 SMARCC1Q92922 1105 aaPredicted RBP7.49□□□□□ -1.21
HMGB3-202ENST00000419110 L3MBTL3Q96JM7 780 aaPredicted RBP7.49□□□□□ -1.21
HMGB3-202ENST00000419110 GJD4Q96KN9 370 aaPredicted RBP7.49□□□□□ -1.21
HMGB3-202ENST00000419110 TEX13AQ9BXU3 409 aaPredicted RBP7.49□□□□□ -1.21
HMGB3-202ENST00000419110 QSER1Q2KHR3 1735 aa7.49□□□□□ -1.21
HMGB3-202ENST00000419110 PRAMEF22A3QJZ6 481 aa7.48□□□□□ -1.21
HMGB3-202ENST00000419110 F6X3S4 739 aa7.48□□□□□ -1.21
HMGB3-202ENST00000419110 ST18O60284 1047 aa7.48□□□□□ -1.21
HMGB3-202ENST00000419110 STARD3NLO95772 234 aa7.48□□□□□ -1.21
HMGB3-202ENST00000419110 ANXA1P04083 346 aa7.48□□□□□ -1.21
HMGB3-202ENST00000419110 GNAI3P08754 354 aa7.48□□□□□ -1.21
HMGB3-202ENST00000419110 NEXNQ0ZGT2 675 aa7.48□□□□□ -1.21
HMGB3-202ENST00000419110 PROSER3Q2NL68 480 aa7.48□□□□□ -1.21
HMGB3-202ENST00000419110 PIGBQ92521 554 aa7.48□□□□□ -1.21
HMGB3-202ENST00000419110 SRCIN1Q9C0H9 1055 aa7.48□□□□□ -1.21
HMGB3-202ENST00000419110 RWDD1Q9H446 243 aaPredicted RBP7.48□□□□□ -1.21
HMGB3-202ENST00000419110 ZBTB40Q9NUA8 1239 aa7.48□□□□□ -1.21
HMGB3-202ENST00000419110 A0A1B0GUL6 1792 aa7.47□□□□□ -1.21
HMGB3-202ENST00000419110 HMMRO75330 724 aa7.47□□□□□ -1.21
HMGB3-202ENST00000419110 ALDH1L1O75891 902 aa7.47□□□□□ -1.21
HMGB3-202ENST00000419110 UBTFL1P0CB47 393 aaPredicted RBP7.47□□□□□ -1.21
HMGB3-202ENST00000419110 MYL6BP14649 208 aa7.47□□□□□ -1.21
HMGB3-202ENST00000419110 PRIM1P49642 420 aaKnown RBP7.47□□□□□ -1.21
HMGB3-202ENST00000419110 HDAC1Q13547 482 aaPredicted RBP7.47□□□□□ -1.21
HMGB3-202ENST00000419110 KIF6Q6ZMV9 814 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms