RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 PTH1RQ03431 593 aa18.19■□□□□ 0.5
SEMA3B-203ENST00000419007 PDRG1Q9NUG6 133 aa18.19■□□□□ 0.5
SEMA3B-203ENST00000419007 PA2G4Q9UQ80 394 aaKnown RBP18.19■□□□□ 0.5
SEMA3B-203ENST00000419007 ATP6V1DQ9Y5K8 247 aa18.19■□□□□ 0.5
SEMA3B-203ENST00000419007 TEFQ10587 303 aa18.19■□□□□ 0.5
SEMA3B-203ENST00000419007 ADCK5Q3MIX3 580 aa18.19■□□□□ 0.5
SEMA3B-203ENST00000419007 GLRX3O76003 335 aaKnown RBP18.18■□□□□ 0.5
SEMA3B-203ENST00000419007 NECAB1Q8N987 351 aa18.18■□□□□ 0.5
SEMA3B-203ENST00000419007 PLEKHG1Q9ULL1 1385 aa18.18■□□□□ 0.5
SEMA3B-203ENST00000419007 IFIT2P09913 472 aaKnown RBP18.18■□□□□ 0.5
SEMA3B-203ENST00000419007 HSP90AB4PQ58FF6 505 aa18.18■□□□□ 0.5
SEMA3B-203ENST00000419007 PKNOX2Q96KN3 472 aa18.18■□□□□ 0.5
SEMA3B-203ENST00000419007 NALCNQ8IZF0 1738 aa18.18■□□□□ 0.5
SEMA3B-203ENST00000419007 SETD1BQ9UPS6 1966 aaKnown RBP18.18■□□□□ 0.5
SEMA3B-203ENST00000419007 BEND3Q5T5X7 828 aa18.18■□□□□ 0.5
SEMA3B-203ENST00000419007 RUFY2Q8WXA3 655 aa18.18■□□□□ 0.5
SEMA3B-203ENST00000419007 EIF4A1P60842 406 aaKnown RBP18.17■□□□□ 0.5
SEMA3B-203ENST00000419007 FERMT3Q86UX7 667 aa18.17■□□□□ 0.5
SEMA3B-203ENST00000419007 XRN1Q8IZH2 1706 aaKnown RBP18.17■□□□□ 0.5
SEMA3B-203ENST00000419007 FMN2Q9NZ56 1722 aa18.17■□□□□ 0.5
SEMA3B-203ENST00000419007 MPRIPQ6WCQ1 1025 aa18.17■□□□□ 0.5
SEMA3B-203ENST00000419007 HYPKQ9NX55 129 aa18.17■□□□□ 0.5
SEMA3B-203ENST00000419007 CYP46A1Q9Y6A2 500 aa18.17■□□□□ 0.5
SEMA3B-203ENST00000419007 JARID2Q92833 1246 aaPredicted RBP18.16■□□□□ 0.5
SEMA3B-203ENST00000419007 PODXL2Q9NZ53 605 aa18.16■□□□□ 0.5
SEMA3B-203ENST00000419007 EPB41L2O43491 1005 aaKnown RBP18.16■□□□□ 0.5
SEMA3B-203ENST00000419007 UVSSAQ2YD98 709 aa18.16■□□□□ 0.5
SEMA3B-203ENST00000419007 IL17RAQ96F46 866 aa18.16■□□□□ 0.5
SEMA3B-203ENST00000419007 FAM208AQ9UK61 1670 aaKnown RBP18.16■□□□□ 0.5
SEMA3B-203ENST00000419007 TOPAZ1Q8N9V7 1692 aa18.15■□□□□ 0.5
SEMA3B-203ENST00000419007 BTBD11A6QL63 1104 aa18.15■□□□□ 0.5
SEMA3B-203ENST00000419007 DYNC1I1O14576 645 aa18.15■□□□□ 0.5
SEMA3B-203ENST00000419007 AACSQ86V21 672 aa18.15■□□□□ 0.5
SEMA3B-203ENST00000419007 TSC1Q92574 1164 aa18.15■□□□□ 0.5
SEMA3B-203ENST00000419007 TCEANC2Q96MN5 208 aa18.15■□□□□ 0.5
SEMA3B-203ENST00000419007 TMEM87AQ8NBN3 555 aa18.15■□□□□ 0.5
SEMA3B-203ENST00000419007 ECHDC1Q9NTX5 307 aa18.15■□□□□ 0.5
SEMA3B-203ENST00000419007 LETM1O95202 739 aaPredicted RBP18.15■□□□□ 0.5
SEMA3B-203ENST00000419007 GPATCH3Q96I76 525 aa18.15■□□□□ 0.5
SEMA3B-203ENST00000419007 TUBGCP6Q96RT7 1819 aa18.14■□□□□ 0.5
SEMA3B-203ENST00000419007 ZKSCAN1P17029 563 aaPredicted RBP18.14■□□□□ 0.49
SEMA3B-203ENST00000419007 NOLC1Q14978 699 aaKnown RBP eCLIP18.14■□□□□ 0.49
SEMA3B-203ENST00000419007 CWF19L2Q2TBE0 894 aaKnown RBP18.14■□□□□ 0.49
SEMA3B-203ENST00000419007 NBPF6Q5VWK0 638 aa18.14■□□□□ 0.49
SEMA3B-203ENST00000419007 SPC24Q8NBT2 197 aa18.14■□□□□ 0.49
SEMA3B-203ENST00000419007 NBPF4Q96M43 638 aa18.14■□□□□ 0.49
SEMA3B-203ENST00000419007 UBR1Q8IWV7 1749 aa18.14■□□□□ 0.49
SEMA3B-203ENST00000419007 BABAM1Q9NWV8 329 aa18.14■□□□□ 0.49
SEMA3B-203ENST00000419007 MAP3K2Q9Y2U5 619 aa18.14■□□□□ 0.49
SEMA3B-203ENST00000419007 KCNA6P17658 529 aa18.13■□□□□ 0.49
SEMA3B-203ENST00000419007 FAM173BQ6P4H8 233 aa18.13■□□□□ 0.49
SEMA3B-203ENST00000419007 ZNF530Q6P9A1 599 aaPredicted RBP18.13■□□□□ 0.49
SEMA3B-203ENST00000419007 MAP7D2Q96T17 732 aa18.13■□□□□ 0.49
SEMA3B-203ENST00000419007 MTMR6Q9Y217 621 aa18.13■□□□□ 0.49
SEMA3B-203ENST00000419007 ADAMTSL3P82987 1691 aa18.13■□□□□ 0.49
SEMA3B-203ENST00000419007 RGPD8O14715 1765 aaPredicted RBP18.13■□□□□ 0.49
SEMA3B-203ENST00000419007 AIMP1Q12904 312 aaKnown RBP18.13■□□□□ 0.49
SEMA3B-203ENST00000419007 LRRC59Q96AG4 307 aaKnown RBP18.13■□□□□ 0.49
SEMA3B-203ENST00000419007 SIL1Q9H173 461 aa18.13■□□□□ 0.49
SEMA3B-203ENST00000419007 PXDNLA1KZ92 1463 aa18.13■□□□□ 0.49
SEMA3B-203ENST00000419007 TTC41PQ6P2S7 1318 aa18.12■□□□□ 0.49
SEMA3B-203ENST00000419007 KDM4AO75164 1064 aa18.12■□□□□ 0.49
SEMA3B-203ENST00000419007 LARP1BQ659C4 914 aaKnown RBP18.12■□□□□ 0.49
SEMA3B-203ENST00000419007 FAM227BQ96M60 508 aa18.12■□□□□ 0.49
SEMA3B-203ENST00000419007 CCDC8Q9H0W5 538 aaPredicted RBP18.12■□□□□ 0.49
SEMA3B-203ENST00000419007 CAMK4Q16566 473 aa18.12■□□□□ 0.49
SEMA3B-203ENST00000419007 ME3Q16798 604 aa18.12■□□□□ 0.49
SEMA3B-203ENST00000419007 FAM177BA6PVY3 158 aa18.11■□□□□ 0.49
SEMA3B-203ENST00000419007 VPS53Q5VIR6 699 aa18.11■□□□□ 0.49
SEMA3B-203ENST00000419007 PIBF1Q8WXW3 757 aa18.11■□□□□ 0.49
SEMA3B-203ENST00000419007 RBM8AQ9Y5S9 174 aaKnown RBP18.11■□□□□ 0.49
SEMA3B-203ENST00000419007 PROSER3Q2NL68 480 aa18.11■□□□□ 0.49
SEMA3B-203ENST00000419007 TBX22Q9Y458 520 aa18.11■□□□□ 0.49
SEMA3B-203ENST00000419007 CACNA1FO60840 1977 aa18.1■□□□□ 0.49
SEMA3B-203ENST00000419007 ZSCAN31Q96LW9 406 aaPredicted RBP18.1■□□□□ 0.49
SEMA3B-203ENST00000419007 STK3Q13188 491 aa18.1■□□□□ 0.49
SEMA3B-203ENST00000419007 BOLA2Q9H3K6 86 aa18.1■□□□□ 0.49
SEMA3B-203ENST00000419007 ZSWIM6Q9HCJ5 1215 aa18.1■□□□□ 0.49
SEMA3B-203ENST00000419007 SH2B1Q9NRF2 756 aaPredicted RBP18.1■□□□□ 0.49
SEMA3B-203ENST00000419007 DBF4Q9UBU7 674 aaPredicted RBP18.1■□□□□ 0.49
SEMA3B-203ENST00000419007 PIK3C2AO00443 1686 aa18.09■□□□□ 0.49
SEMA3B-203ENST00000419007 ADCY9O60503 1353 aa18.09■□□□□ 0.49
SEMA3B-203ENST00000419007 PRAMEF22A3QJZ6 481 aa18.09■□□□□ 0.49
SEMA3B-203ENST00000419007 COL9A3Q14050 684 aaPredicted RBP18.09■□□□□ 0.49
SEMA3B-203ENST00000419007 TPCN1Q9ULQ1 816 aa18.09■□□□□ 0.49
SEMA3B-203ENST00000419007 CCDC171Q6TFL3 1326 aa18.09■□□□□ 0.49
SEMA3B-203ENST00000419007 GOLGA6L4A6NEF3 574 aa18.09■□□□□ 0.49
SEMA3B-203ENST00000419007 NMIQ13287 307 aaPredicted RBP18.09■□□□□ 0.49
SEMA3B-203ENST00000419007 CREB3L3Q68CJ9 461 aa18.09■□□□□ 0.49
SEMA3B-203ENST00000419007 LMOD2Q6P5Q4 547 aa18.09■□□□□ 0.49
SEMA3B-203ENST00000419007 EVI5LQ96CN4 794 aa18.09■□□□□ 0.49
SEMA3B-203ENST00000419007 DIP2AQ14689 1571 aa18.08■□□□□ 0.49
SEMA3B-203ENST00000419007 G3BP1Q13283 466 aaKnown RBP eCLIP18.08■□□□□ 0.49
SEMA3B-203ENST00000419007 FSD1Q9BTV5 496 aa18.08■□□□□ 0.49
SEMA3B-203ENST00000419007 TFIP11Q9UBB9 837 aaKnown RBP18.08■□□□□ 0.48
SEMA3B-203ENST00000419007 CCDC192P0DO97 292 aa18.08■□□□□ 0.48
SEMA3B-203ENST00000419007 CDC37L1Q7L3B6 337 aa18.08■□□□□ 0.48
SEMA3B-203ENST00000419007 ST3GAL1Q11201 340 aa18.07■□□□□ 0.48
SEMA3B-203ENST00000419007 C1orf141Q5JVX7 400 aa18.07■□□□□ 0.48
SEMA3B-203ENST00000419007 CKAP2LQ8IYA6 745 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms