RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 LINS1Q8NG48 757 aa14.05□□□□□ -0.16
CSPG4P3Y-201ENST00000418188 EVI5LQ96CN4 794 aa14.05□□□□□ -0.16
CSPG4P3Y-201ENST00000418188 GRM8O00222 908 aa14.04□□□□□ -0.16
CSPG4P3Y-201ENST00000418188 LSG1Q9H089 658 aaKnown RBP14.04□□□□□ -0.16
CSPG4P3Y-201ENST00000418188 PDRG1Q9NUG6 133 aa14.04□□□□□ -0.16
CSPG4P3Y-201ENST00000418188 HS1BP3Q53T59 392 aa14.04□□□□□ -0.16
CSPG4P3Y-201ENST00000418188 USP48Q86UV5 1035 aa14.04□□□□□ -0.16
CSPG4P3Y-201ENST00000418188 NSFL1CQ9UNZ2 370 aaKnown RBP14.04□□□□□ -0.16
CSPG4P3Y-201ENST00000418188 SETD1BQ9UPS6 1966 aaKnown RBP14.04□□□□□ -0.16
CSPG4P3Y-201ENST00000418188 STX6O43752 255 aa14.04□□□□□ -0.16
CSPG4P3Y-201ENST00000418188 ORAI2Q96SN7 254 aa14.04□□□□□ -0.16
CSPG4P3Y-201ENST00000418188 SIL1Q9H173 461 aa14.04□□□□□ -0.16
CSPG4P3Y-201ENST00000418188 NLRP2Q9NX02 1062 aa14.04□□□□□ -0.16
CSPG4P3Y-201ENST00000418188 CSB-PGBD3P0DP91 1061 aa14.03□□□□□ -0.16
CSPG4P3Y-201ENST00000418188 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.03□□□□□ -0.16
CSPG4P3Y-201ENST00000418188 ZSCAN22P10073 491 aaPredicted RBP14.03□□□□□ -0.16
CSPG4P3Y-201ENST00000418188 RNF20Q5VTR2 975 aa14.03□□□□□ -0.16
CSPG4P3Y-201ENST00000418188 ARHGEF25Q86VW2 580 aa14.03□□□□□ -0.16
CSPG4P3Y-201ENST00000418188 RASEFQ8IZ41 740 aa14.03□□□□□ -0.16
CSPG4P3Y-201ENST00000418188 ZSCAN31Q96LW9 406 aaPredicted RBP14.03□□□□□ -0.16
CSPG4P3Y-201ENST00000418188 FSD1Q9BTV5 496 aa14.03□□□□□ -0.16
CSPG4P3Y-201ENST00000418188 ADCY9O60503 1353 aa14.03□□□□□ -0.16
CSPG4P3Y-201ENST00000418188 MTX1Q13505 466 aa14.03□□□□□ -0.16
CSPG4P3Y-201ENST00000418188 PROSER3Q2NL68 480 aa14.03□□□□□ -0.16
CSPG4P3Y-201ENST00000418188 CCDC39Q9UFE4 941 aa14.03□□□□□ -0.16
CSPG4P3Y-201ENST00000418188 VPS37CA5D8V6 355 aaPredicted RBP14.02□□□□□ -0.16
CSPG4P3Y-201ENST00000418188 FIBPO43427 364 aa14.02□□□□□ -0.16
CSPG4P3Y-201ENST00000418188 MYL6BP14649 208 aa14.02□□□□□ -0.16
CSPG4P3Y-201ENST00000418188 NWD1Q149M9 1564 aa14.02□□□□□ -0.16
CSPG4P3Y-201ENST00000418188 CCDC83Q8IWF9 413 aa14.02□□□□□ -0.16
CSPG4P3Y-201ENST00000418188 CCDC8Q9H0W5 538 aaPredicted RBP14.02□□□□□ -0.16
CSPG4P3Y-201ENST00000418188 CACNA1FO60840 1977 aa14.02□□□□□ -0.16
CSPG4P3Y-201ENST00000418188 FAM208AQ9UK61 1670 aaKnown RBP14.02□□□□□ -0.16
CSPG4P3Y-201ENST00000418188 ZC3H6P61129 1189 aaKnown RBP14.02□□□□□ -0.17
CSPG4P3Y-201ENST00000418188 LARP1Q6PKG0 1096 aaKnown RBP14.02□□□□□ -0.17
CSPG4P3Y-201ENST00000418188 PSMA5P28066 241 aa14.02□□□□□ -0.17
CSPG4P3Y-201ENST00000418188 DDX21Q9NR30 783 aaKnown RBP eCLIP14.02□□□□□ -0.17
CSPG4P3Y-201ENST00000418188 SH2B1Q9NRF2 756 aaPredicted RBP14.02□□□□□ -0.17
CSPG4P3Y-201ENST00000418188 CPA1P15085 419 aa14.01□□□□□ -0.17
CSPG4P3Y-201ENST00000418188 TTC5Q8N0Z6 440 aa14.01□□□□□ -0.17
CSPG4P3Y-201ENST00000418188 ADGRL3Q9HAR2 1447 aa14.01□□□□□ -0.17
CSPG4P3Y-201ENST00000418188 LRRC37A3O60309 1634 aa14.01□□□□□ -0.17
CSPG4P3Y-201ENST00000418188 SYT1P21579 422 aa14.01□□□□□ -0.17
CSPG4P3Y-201ENST00000418188 KRT28Q7Z3Y7 464 aa14.01□□□□□ -0.17
CSPG4P3Y-201ENST00000418188 LETM1O95202 739 aaPredicted RBP14.01□□□□□ -0.17
CSPG4P3Y-201ENST00000418188 PROSER2Q86WR7 435 aaPredicted RBP14.01□□□□□ -0.17
CSPG4P3Y-201ENST00000418188 BICC1Q9H694 974 aaKnown RBP14.01□□□□□ -0.17
CSPG4P3Y-201ENST00000418188 XRN1Q8IZH2 1706 aaKnown RBP14□□□□□ -0.17
CSPG4P3Y-201ENST00000418188 PLCB2Q00722 1185 aa14□□□□□ -0.17
CSPG4P3Y-201ENST00000418188 RUFY3Q7L099 469 aa14□□□□□ -0.17
CSPG4P3Y-201ENST00000418188 FAM184AQ8NB25 1140 aa14□□□□□ -0.17
CSPG4P3Y-201ENST00000418188 IL17RAQ96F46 866 aa14□□□□□ -0.17
CSPG4P3Y-201ENST00000418188 BOLA2Q9H3K6 86 aa14□□□□□ -0.17
CSPG4P3Y-201ENST00000418188 CNPY2Q9Y2B0 182 aa14□□□□□ -0.17
CSPG4P3Y-201ENST00000418188 GADD45BO75293 160 aaPredicted RBP14□□□□□ -0.17
CSPG4P3Y-201ENST00000418188 VPS53Q5VIR6 699 aa14□□□□□ -0.17
CSPG4P3Y-201ENST00000418188 PRAMEF22A3QJZ6 481 aa14□□□□□ -0.17
CSPG4P3Y-201ENST00000418188 TATP17735 454 aaPredicted RBP14□□□□□ -0.17
CSPG4P3Y-201ENST00000418188 GJB2P29033 226 aa14□□□□□ -0.17
CSPG4P3Y-201ENST00000418188 CCDC183Q5T5S1 534 aa14□□□□□ -0.17
CSPG4P3Y-201ENST00000418188 DDX54Q8TDD1 881 aaKnown RBP14□□□□□ -0.17
CSPG4P3Y-201ENST00000418188 FER1L4A9Z1Z3 1794 aa13.99□□□□□ -0.17
CSPG4P3Y-201ENST00000418188 NCAPD2Q15021 1401 aa13.99□□□□□ -0.17
CSPG4P3Y-201ENST00000418188 TPM2P07951 284 aa13.99□□□□□ -0.17
CSPG4P3Y-201ENST00000418188 SLC39A6Q13433 755 aa13.99□□□□□ -0.17
CSPG4P3Y-201ENST00000418188 HSP90AA2PQ14568 343 aaPredicted RBP13.99□□□□□ -0.17
CSPG4P3Y-201ENST00000418188 SUCLG2Q96I99 432 aa13.99□□□□□ -0.17
CSPG4P3Y-201ENST00000418188 NOL7Q9UMY1 257 aaKnown RBP13.99□□□□□ -0.17
CSPG4P3Y-201ENST00000418188 USP42Q9H9J4 1324 aaKnown RBP13.99□□□□□ -0.17
CSPG4P3Y-201ENST00000418188 UBE2HP62256 183 aa13.99□□□□□ -0.17
CSPG4P3Y-201ENST00000418188 PTH1RQ03431 593 aa13.99□□□□□ -0.17
CSPG4P3Y-201ENST00000418188 TTC14Q96N46 770 aa13.99□□□□□ -0.17
CSPG4P3Y-201ENST00000418188 RBM8AQ9Y5S9 174 aaKnown RBP13.99□□□□□ -0.17
CSPG4P3Y-201ENST00000418188 F13A1P00488 732 aa13.99□□□□□ -0.17
CSPG4P3Y-201ENST00000418188 CCDC171Q6TFL3 1326 aa13.98□□□□□ -0.17
CSPG4P3Y-201ENST00000418188 GOLGA6L4A6NEF3 574 aa13.98□□□□□ -0.17
CSPG4P3Y-201ENST00000418188 GLIPR1L2Q4G1C9 344 aa13.98□□□□□ -0.17
CSPG4P3Y-201ENST00000418188 ZNF790Q6PG37 636 aa13.98□□□□□ -0.17
CSPG4P3Y-201ENST00000418188 BLOC1S2Q6QNY1 142 aa13.98□□□□□ -0.17
CSPG4P3Y-201ENST00000418188 PDLIM2Q96JY6 352 aa13.98□□□□□ -0.17
CSPG4P3Y-201ENST00000418188 MYD88Q99836 296 aa13.98□□□□□ -0.17
CSPG4P3Y-201ENST00000418188 TM6SF1Q9BZW5 370 aa13.98□□□□□ -0.17
CSPG4P3Y-201ENST00000418188 PDCP20941 246 aa13.97□□□□□ -0.17
CSPG4P3Y-201ENST00000418188 FGD1P98174 961 aa13.97□□□□□ -0.17
CSPG4P3Y-201ENST00000418188 ANKRD1Q15327 319 aa13.97□□□□□ -0.17
CSPG4P3Y-201ENST00000418188 EAF2Q96CJ1 260 aaPredicted RBP13.97□□□□□ -0.17
CSPG4P3Y-201ENST00000418188 MCM5P33992 734 aa13.97□□□□□ -0.17
CSPG4P3Y-201ENST00000418188 NMIQ13287 307 aaPredicted RBP13.97□□□□□ -0.17
CSPG4P3Y-201ENST00000418188 DNTTIP2Q5QJE6 756 aaKnown RBP13.97□□□□□ -0.17
CSPG4P3Y-201ENST00000418188 LARP1BQ659C4 914 aaKnown RBP13.97□□□□□ -0.17
CSPG4P3Y-201ENST00000418188 CREB3L3Q68CJ9 461 aa13.97□□□□□ -0.17
CSPG4P3Y-201ENST00000418188 COPS6Q7L5N1 327 aa13.97□□□□□ -0.17
CSPG4P3Y-201ENST00000418188 ZKSCAN5Q9Y2L8 839 aa13.97□□□□□ -0.17
CSPG4P3Y-201ENST00000418188 OFD1O75665 1012 aa13.97□□□□□ -0.17
CSPG4P3Y-201ENST00000418188 KIAA2012Q0VF49 1180 aa13.97□□□□□ -0.17
CSPG4P3Y-201ENST00000418188 XAGE3Q8WTP9 111 aa13.97□□□□□ -0.17
CSPG4P3Y-201ENST00000418188 FAM227BQ96M60 508 aa13.97□□□□□ -0.17
CSPG4P3Y-201ENST00000418188 ADCK5Q3MIX3 580 aa13.96□□□□□ -0.17
CSPG4P3Y-201ENST00000418188 NFATC2IPQ8NCF5 419 aa13.96□□□□□ -0.17
CSPG4P3Y-201ENST00000418188 ZSWIM6Q9HCJ5 1215 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms