RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 PDE6BP35913 854 aa20■□□□□ 0.79
NUP50-204ENST00000417702 KIF6Q6ZMV9 814 aa20■□□□□ 0.79
NUP50-204ENST00000417702 NBPF5PQ86XG9 351 aaPredicted RBP20■□□□□ 0.79
NUP50-204ENST00000417702 NIP7Q9Y221 180 aaKnown RBP eCLIP20■□□□□ 0.79
NUP50-204ENST00000417702 CCDC24Q8N4L8 307 aa19.99■□□□□ 0.79
NUP50-204ENST00000417702 BRCA1P38398 1863 aaKnown RBP19.99■□□□□ 0.79
NUP50-204ENST00000417702 BCORQ6W2J9 1755 aa19.98■□□□□ 0.79
NUP50-204ENST00000417702 ERVV-1B6SEH8 477 aa19.98■□□□□ 0.79
NUP50-204ENST00000417702 CCDC184Q52MB2 194 aa19.98■□□□□ 0.79
NUP50-204ENST00000417702 TTLL6Q8N841 843 aa19.98■□□□□ 0.79
NUP50-204ENST00000417702 MAP3K15Q6ZN16 1313 aa19.98■□□□□ 0.79
NUP50-204ENST00000417702 ATP10DQ9P241 1426 aa19.97■□□□□ 0.79
NUP50-204ENST00000417702 CALD1Q05682 793 aaKnown RBP19.97■□□□□ 0.79
NUP50-204ENST00000417702 HLFQ16534 295 aa19.97■□□□□ 0.79
NUP50-204ENST00000417702 TPTE2Q6XPS3 522 aa19.97■□□□□ 0.79
NUP50-204ENST00000417702 CFAP44Q96MT7 982 aa19.97■□□□□ 0.79
NUP50-204ENST00000417702 MRS2Q9HD23 443 aa19.97■□□□□ 0.79
NUP50-204ENST00000417702 TTLL7Q6ZT98 887 aa19.96■□□□□ 0.79
NUP50-204ENST00000417702 ZNF622Q969S3 477 aaKnown RBP eCLIP19.96■□□□□ 0.79
NUP50-204ENST00000417702 ARFGEF1Q9Y6D6 1849 aa19.95■□□□□ 0.78
NUP50-204ENST00000417702 ADCY9O60503 1353 aa19.95■□□□□ 0.78
NUP50-204ENST00000417702 FAM177BA6PVY3 158 aa19.94■□□□□ 0.78
NUP50-204ENST00000417702 GTF2E1P29083 439 aaPredicted RBP19.94■□□□□ 0.78
NUP50-204ENST00000417702 NECTIN2Q92692 538 aa19.94■□□□□ 0.78
NUP50-204ENST00000417702 ZBTB3Q9H5J0 574 aa19.94■□□□□ 0.78
NUP50-204ENST00000417702 GPBP1L1Q9HC44 474 aaPredicted RBP19.94■□□□□ 0.78
NUP50-204ENST00000417702 PDIA6Q15084 440 aa19.93■□□□□ 0.78
NUP50-204ENST00000417702 KRT24Q2M2I5 525 aa19.93■□□□□ 0.78
NUP50-204ENST00000417702 IFT57Q9NWB7 429 aa19.93■□□□□ 0.78
NUP50-204ENST00000417702 HOXB7P09629 217 aa19.92■□□□□ 0.78
NUP50-204ENST00000417702 GNAI1P63096 354 aa19.92■□□□□ 0.78
NUP50-204ENST00000417702 C9orf131Q5VYM1 1079 aa19.92■□□□□ 0.78
NUP50-204ENST00000417702 ZNF526Q8TF50 670 aaPredicted RBP19.92■□□□□ 0.78
NUP50-204ENST00000417702 CNKSR1Q969H4 720 aa19.92■□□□□ 0.78
NUP50-204ENST00000417702 NYXQ9GZU5 481 aa19.92■□□□□ 0.78
NUP50-204ENST00000417702 MBIPQ9NS73 344 aa19.92■□□□□ 0.78
NUP50-204ENST00000417702 ANXA1P04083 346 aa19.91■□□□□ 0.78
NUP50-204ENST00000417702 PROSER3Q2NL68 480 aa19.91■□□□□ 0.78
NUP50-204ENST00000417702 STYK1Q6J9G0 422 aa19.91■□□□□ 0.78
NUP50-204ENST00000417702 GIGYF2Q6Y7W6 1299 aaKnown RBP19.91■□□□□ 0.78
NUP50-204ENST00000417702 MASTLQ96GX5 879 aa19.91■□□□□ 0.78
NUP50-204ENST00000417702 DDX21Q9NR30 783 aaKnown RBP eCLIP19.91■□□□□ 0.78
NUP50-204ENST00000417702 ANKRD31Q8N7Z5 1873 aa19.9■□□□□ 0.78
NUP50-204ENST00000417702 ZNF853P0CG23 659 aa19.9■□□□□ 0.78
NUP50-204ENST00000417702 SRGNP10124 158 aa19.9■□□□□ 0.78
NUP50-204ENST00000417702 GPTP24298 496 aa19.9■□□□□ 0.78
NUP50-204ENST00000417702 HDGFL1Q5TGJ6 251 aa19.9■□□□□ 0.78
NUP50-204ENST00000417702 LRP10Q7Z4F1 713 aa19.9■□□□□ 0.78
NUP50-204ENST00000417702 DLEC1Q9Y238 1755 aa19.9■□□□□ 0.78
NUP50-204ENST00000417702 AIMP1Q12904 312 aaKnown RBP19.89■□□□□ 0.77
NUP50-204ENST00000417702 DUSP27Q5VZP5 1158 aa19.89■□□□□ 0.77
NUP50-204ENST00000417702 COPS6Q7L5N1 327 aa19.89■□□□□ 0.77
NUP50-204ENST00000417702 RNF181Q9P0P0 153 aa19.89■□□□□ 0.77
NUP50-204ENST00000417702 XAGE3Q8WTP9 111 aa19.88■□□□□ 0.77
NUP50-204ENST00000417702 CHPF2Q9P2E5 772 aa19.88■□□□□ 0.77
NUP50-204ENST00000417702 C21orf2O43822 256 aa19.87■□□□□ 0.77
NUP50-204ENST00000417702 NPR1P16066 1061 aa19.87■□□□□ 0.77
NUP50-204ENST00000417702 PARP10Q53GL7 1025 aa19.87■□□□□ 0.77
NUP50-204ENST00000417702 ZNF34Q8IZ26 560 aa19.87■□□□□ 0.77
NUP50-204ENST00000417702 ZNF219Q9P2Y4 722 aaPredicted RBP19.87■□□□□ 0.77
NUP50-204ENST00000417702 DBF4Q9UBU7 674 aaPredicted RBP19.87■□□□□ 0.77
NUP50-204ENST00000417702 NUP98P52948 1817 aa19.87■□□□□ 0.77
NUP50-204ENST00000417702 KLRG2A4D1S0 409 aaPredicted RBP19.86■□□□□ 0.77
NUP50-204ENST00000417702 C1QTNF8P60827 252 aa19.86■□□□□ 0.77
NUP50-204ENST00000417702 RASSF7Q02833 373 aa19.86■□□□□ 0.77
NUP50-204ENST00000417702 CCDC27Q2M243 656 aa19.86■□□□□ 0.77
NUP50-204ENST00000417702 HSP90AB3PQ58FF7 597 aa19.86■□□□□ 0.77
NUP50-204ENST00000417702 SUSD4Q5VX71 490 aa19.86■□□□□ 0.77
NUP50-204ENST00000417702 PRPF40BQ6NWY9 871 aaKnown RBP19.86■□□□□ 0.77
NUP50-204ENST00000417702 PPP1R42Q7Z4L9 355 aa19.86■□□□□ 0.77
NUP50-204ENST00000417702 NUTM1Q86Y26 1132 aa19.86■□□□□ 0.77
NUP50-204ENST00000417702 IBTKQ9P2D0 1353 aaPredicted RBP19.85■□□□□ 0.77
NUP50-204ENST00000417702 UBN2Q6ZU65 1347 aa19.85■□□□□ 0.77
NUP50-204ENST00000417702 LMNB1P20700 586 aa19.85■□□□□ 0.77
NUP50-204ENST00000417702 SOGA3Q5TF21 947 aa19.85■□□□□ 0.77
NUP50-204ENST00000417702 ERFEQ4G0M1 354 aa19.84■□□□□ 0.77
NUP50-204ENST00000417702 CHMP4AQ9BY43 222 aa19.84■□□□□ 0.77
NUP50-204ENST00000417702 HYPKQ9NX55 129 aa19.84■□□□□ 0.77
NUP50-204ENST00000417702 COL11A2P13942 1736 aaPredicted RBP19.84■□□□□ 0.77
NUP50-204ENST00000417702 SENP3-EIF4A1A0A087X0R7 540 aa19.83■□□□□ 0.77
NUP50-204ENST00000417702 ELL2O00472 640 aaPredicted RBP19.83■□□□□ 0.77
NUP50-204ENST00000417702 NCBP3Q53F19 620 aaKnown RBP19.83■□□□□ 0.77
NUP50-204ENST00000417702 WWC1Q8IX03 1113 aa19.83■□□□□ 0.77
NUP50-204ENST00000417702 UTP14AQ9BVJ6 771 aaKnown RBP19.83■□□□□ 0.77
NUP50-204ENST00000417702 ABCC12Q96J65 1359 aa19.83■□□□□ 0.76
NUP50-204ENST00000417702 NFKBIEO00221 500 aa19.82■□□□□ 0.76
NUP50-204ENST00000417702 NTSR2O95665 410 aa19.82■□□□□ 0.76
NUP50-204ENST00000417702 ALDH1B1P30837 517 aa19.82■□□□□ 0.76
NUP50-204ENST00000417702 TCIRG1Q13488 830 aa19.81■□□□□ 0.76
NUP50-204ENST00000417702 ANKRD13DQ6ZTN6 518 aa19.81■□□□□ 0.76
NUP50-204ENST00000417702 PLBD2Q8NHP8 589 aa19.81■□□□□ 0.76
NUP50-204ENST00000417702 ZC3H4Q9UPT8 1303 aaKnown RBP19.8■□□□□ 0.76
NUP50-204ENST00000417702 CRY2Q49AN0 593 aa19.8■□□□□ 0.76
NUP50-204ENST00000417702 FAM9BQ8IZU0 186 aa19.8■□□□□ 0.76
NUP50-204ENST00000417702 C8orf58Q8NAV2 365 aa19.8■□□□□ 0.76
NUP50-204ENST00000417702 RPGRQ92834 1020 aaKnown RBP19.8■□□□□ 0.76
NUP50-204ENST00000417702 TAOK3Q9H2K8 898 aa19.8■□□□□ 0.76
NUP50-204ENST00000417702 RNF123Q5XPI4 1314 aa19.79■□□□□ 0.76
NUP50-204ENST00000417702 KDM2BQ8NHM5 1336 aa19.79■□□□□ 0.76
NUP50-204ENST00000417702 SLX4Q8IY92 1834 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 123.9 ms