RNA–Protein interactions for RNA: ENST00000417504.5

PTPA-211, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 4

Gene PTPA, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-211ENST00000417504 C1orf141Q5JVX7 400 aa10.62□□□□□ -0.71
PTPA-211ENST00000417504 ZNF530Q6P9A1 599 aaPredicted RBP10.62□□□□□ -0.71
PTPA-211ENST00000417504 CCDC125Q86Z20 511 aa10.62□□□□□ -0.71
PTPA-211ENST00000417504 NGEFQ8N5V2 710 aa10.62□□□□□ -0.71
PTPA-211ENST00000417504 CDCA7Q9BWT1 371 aaPredicted RBP10.62□□□□□ -0.71
PTPA-211ENST00000417504 SPG7Q9UQ90 795 aa10.62□□□□□ -0.71
PTPA-211ENST00000417504 ITGB4P16144 1822 aa10.62□□□□□ -0.71
PTPA-211ENST00000417504 TOGARAM1Q9Y4F4 1720 aa10.61□□□□□ -0.71
PTPA-211ENST00000417504 ADAMTS7Q9UKP4 1686 aa10.61□□□□□ -0.71
PTPA-211ENST00000417504 TMPOP42166 694 aaKnown RBP10.61□□□□□ -0.71
PTPA-211ENST00000417504 RIPK4P57078 832 aa10.61□□□□□ -0.71
PTPA-211ENST00000417504 HIC1Q14526 733 aa10.61□□□□□ -0.71
PTPA-211ENST00000417504 PHACTR3Q96KR7 559 aa10.61□□□□□ -0.71
PTPA-211ENST00000417504 MTHFSDQ2M296 383 aaKnown RBP10.6□□□□□ -0.71
PTPA-211ENST00000417504 DMRTA1Q5VZB9 504 aa10.6□□□□□ -0.71
PTPA-211ENST00000417504 RTF1Q92541 710 aaKnown RBP10.6□□□□□ -0.71
PTPA-211ENST00000417504 GNPATO15228 680 aa10.59□□□□□ -0.71
PTPA-211ENST00000417504 FAM98CQ17RN3 349 aaKnown RBP10.59□□□□□ -0.71
PTPA-211ENST00000417504 TPRNQ4KMQ1 711 aa10.59□□□□□ -0.71
PTPA-211ENST00000417504 BARGINQ6ZT62 677 aa10.59□□□□□ -0.71
PTPA-211ENST00000417504 GJD4Q96KN9 370 aaPredicted RBP10.59□□□□□ -0.71
PTPA-211ENST00000417504 KDM3BQ7LBC6 1761 aa10.59□□□□□ -0.71
PTPA-211ENST00000417504 SBF2Q86WG5 1849 aa10.58□□□□□ -0.72
PTPA-211ENST00000417504 GNAT3A8MTJ3 354 aa10.58□□□□□ -0.72
PTPA-211ENST00000417504 ZMYND10O75800 440 aa10.58□□□□□ -0.72
PTPA-211ENST00000417504 PRSS12P56730 875 aa10.58□□□□□ -0.72
PTPA-211ENST00000417504 CALD1Q05682 793 aaKnown RBP10.58□□□□□ -0.72
PTPA-211ENST00000417504 DDB1Q16531 1140 aa10.58□□□□□ -0.72
PTPA-211ENST00000417504 AKAP4Q5JQC9 854 aa10.58□□□□□ -0.72
PTPA-211ENST00000417504 ZCRB1Q8TBF4 217 aaKnown RBP10.58□□□□□ -0.72
PTPA-211ENST00000417504 ZBED2Q9BTP6 218 aa10.58□□□□□ -0.72
PTPA-211ENST00000417504 HSP90AB1P08238 724 aaKnown RBP10.57□□□□□ -0.72
PTPA-211ENST00000417504 CCDC27Q2M243 656 aa10.57□□□□□ -0.72
PTPA-211ENST00000417504 CDAN1Q8IWY9 1227 aa10.57□□□□□ -0.72
PTPA-211ENST00000417504 IFNL2Q8IZJ0 200 aa10.57□□□□□ -0.72
PTPA-211ENST00000417504 CDCA7LQ96GN5 454 aa10.57□□□□□ -0.72
PTPA-211ENST00000417504 MRC1P22897 1456 aa10.56□□□□□ -0.72
PTPA-211ENST00000417504 PAPPAQ13219 1627 aa10.56□□□□□ -0.72
PTPA-211ENST00000417504 EXOC5O00471 708 aa10.56□□□□□ -0.72
PTPA-211ENST00000417504 LSM11P83369 360 aaKnown RBP eCLIP10.56□□□□□ -0.72
PTPA-211ENST00000417504 DDX54Q8TDD1 881 aaKnown RBP10.56□□□□□ -0.72
PTPA-211ENST00000417504 SLC4A5Q9BY07 1137 aa10.56□□□□□ -0.72
PTPA-211ENST00000417504 RBM27Q9P2N5 1060 aaKnown RBP10.56□□□□□ -0.72
PTPA-211ENST00000417504 NHSQ6T4R5 1651 aa10.56□□□□□ -0.72
PTPA-211ENST00000417504 HTATSF1O43719 755 aaKnown RBP10.55□□□□□ -0.72
PTPA-211ENST00000417504 CENPBP07199 599 aaPredicted RBP10.55□□□□□ -0.72
PTPA-211ENST00000417504 PHKG2P15735 406 aa10.55□□□□□ -0.72
PTPA-211ENST00000417504 FECHP22830 423 aa10.55□□□□□ -0.72
PTPA-211ENST00000417504 PROX2Q3B8N5 592 aa10.55□□□□□ -0.72
PTPA-211ENST00000417504 PADI6Q6TGC4 694 aa10.55□□□□□ -0.72
PTPA-211ENST00000417504 MCM10Q7L590 875 aa10.55□□□□□ -0.72
PTPA-211ENST00000417504 WWC1Q8IX03 1113 aa10.55□□□□□ -0.72
PTPA-211ENST00000417504 KRTAP3-3Q9BYR6 98 aa10.55□□□□□ -0.72
PTPA-211ENST00000417504 KRTAP3-2Q9BYR7 98 aa10.55□□□□□ -0.72
PTPA-211ENST00000417504 KDM6AO15550 1401 aaPredicted RBP10.55□□□□□ -0.72
PTPA-211ENST00000417504 LAMB4A4D0S4 1761 aa10.54□□□□□ -0.72
PTPA-211ENST00000417504 TRIM6-TRIM34B2RNG4 842 aa10.54□□□□□ -0.72
PTPA-211ENST00000417504 TEFQ10587 303 aa10.54□□□□□ -0.72
PTPA-211ENST00000417504 PDE3BQ13370 1112 aa10.54□□□□□ -0.72
PTPA-211ENST00000417504 DCTN1Q14203 1278 aa10.54□□□□□ -0.72
PTPA-211ENST00000417504 DEFB132Q7Z7B7 95 aa10.54□□□□□ -0.72
PTPA-211ENST00000417504 TTC13Q8NBP0 860 aa10.54□□□□□ -0.72
PTPA-211ENST00000417504 UBR2Q8IWV8 1755 aa10.54□□□□□ -0.72
PTPA-211ENST00000417504 BTAF1O14981 1849 aa10.54□□□□□ -0.72
PTPA-211ENST00000417504 CYP27B1O15528 508 aa10.53□□□□□ -0.72
PTPA-211ENST00000417504 ONECUT3O60422 494 aaPredicted RBP10.53□□□□□ -0.72
PTPA-211ENST00000417504 SF3B2Q13435 895 aaKnown RBP10.53□□□□□ -0.72
PTPA-211ENST00000417504 MPRIPQ6WCQ1 1025 aa10.53□□□□□ -0.72
PTPA-211ENST00000417504 WDR63Q8IWG1 891 aa10.53□□□□□ -0.72
PTPA-211ENST00000417504 DCAF5Q96JK2 942 aa10.53□□□□□ -0.72
PTPA-211ENST00000417504 THUMPD2Q9BTF0 503 aaKnown RBP10.53□□□□□ -0.72
PTPA-211ENST00000417504 MYH16Q9H6N6 1097 aa10.53□□□□□ -0.72
PTPA-211ENST00000417504 TSKSQ9UJT2 592 aa10.53□□□□□ -0.72
PTPA-211ENST00000417504 VPS9D1Q9Y2B5 631 aa10.53□□□□□ -0.72
PTPA-211ENST00000417504 LAS1LQ9Y4W2 734 aaKnown RBP10.53□□□□□ -0.72
PTPA-211ENST00000417504 IL16Q14005 1332 aa10.53□□□□□ -0.72
PTPA-211ENST00000417504 ZNF521Q96K83 1311 aa10.53□□□□□ -0.72
PTPA-211ENST00000417504 CEMIPQ8WUJ3 1361 aa10.52□□□□□ -0.72
PTPA-211ENST00000417504 E9PSI1 815 aa10.52□□□□□ -0.73
PTPA-211ENST00000417504 TK2O00142 265 aa10.52□□□□□ -0.73
PTPA-211ENST00000417504 RNMTO43148 476 aaKnown RBP10.52□□□□□ -0.73
PTPA-211ENST00000417504 GNAI1P63096 354 aa10.52□□□□□ -0.73
PTPA-211ENST00000417504 ANKRD13DQ6ZTN6 518 aa10.52□□□□□ -0.73
PTPA-211ENST00000417504 SEPT12Q8IYM1 358 aa10.52□□□□□ -0.73
PTPA-211ENST00000417504 FAM198AQ9UFP1 575 aa10.52□□□□□ -0.73
PTPA-211ENST00000417504 CACNA1FO60840 1977 aa10.52□□□□□ -0.73
PTPA-211ENST00000417504 C5P01031 1676 aa10.51□□□□□ -0.73
PTPA-211ENST00000417504 PRKCSHP14314 528 aaPredicted RBP10.51□□□□□ -0.73
PTPA-211ENST00000417504 ADGRD1Q6QNK2 874 aa10.51□□□□□ -0.73
PTPA-211ENST00000417504 KRI1Q8N9T8 703 aaKnown RBP10.51□□□□□ -0.73
PTPA-211ENST00000417504 IFT57Q9NWB7 429 aa10.51□□□□□ -0.73
PTPA-211ENST00000417504 CABP4P57796 275 aa10.5□□□□□ -0.73
PTPA-211ENST00000417504 MAP2K5Q13163 448 aa10.5□□□□□ -0.73
PTPA-211ENST00000417504 PACS2Q86VP3 889 aa10.5□□□□□ -0.73
PTPA-211ENST00000417504 KIAA1468Q9P260 1216 aa10.5□□□□□ -0.73
PTPA-211ENST00000417504 TSPYL4Q9UJ04 414 aa10.5□□□□□ -0.73
PTPA-211ENST00000417504 MARCH10Q8NA82 808 aaPredicted RBP10.49□□□□□ -0.73
PTPA-211ENST00000417504 IL17REQ8NFR9 667 aa10.49□□□□□ -0.73
PTPA-211ENST00000417504 SYTL4Q96C24 671 aaPredicted RBP10.49□□□□□ -0.73
PTPA-211ENST00000417504 SLC52A2Q9HAB3 445 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms