RNA–Protein interactions for RNA: ENST00000416177.1

ABCB1-202, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 5

Gene ABCB1, Length 461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-202ENST00000416177 BRIP1Q9BX63 1249 aa13.49□□□□□ -0.25
ABCB1-202ENST00000416177 WWC3Q9ULE0 1092 aa13.49□□□□□ -0.25
ABCB1-202ENST00000416177 TBC1D2BQ9UPU7 963 aa13.49□□□□□ -0.25
ABCB1-202ENST00000416177 ZNF330Q9Y3S2 320 aaPredicted RBP13.49□□□□□ -0.25
ABCB1-202ENST00000416177 PITPNM1O00562 1244 aa13.48□□□□□ -0.25
ABCB1-202ENST00000416177 CAMTA2O94983 1202 aa13.48□□□□□ -0.25
ABCB1-202ENST00000416177 DDX10Q13206 875 aaKnown RBP13.48□□□□□ -0.25
ABCB1-202ENST00000416177 DCTN1Q14203 1278 aa13.48□□□□□ -0.25
ABCB1-202ENST00000416177 TBC1D9BQ66K14 1250 aa13.48□□□□□ -0.25
ABCB1-202ENST00000416177 TTLL6Q8N841 843 aa13.48□□□□□ -0.25
ABCB1-202ENST00000416177 ERBB4Q15303 1308 aa13.47□□□□□ -0.25
ABCB1-202ENST00000416177 NPHP1O15259 732 aa13.47□□□□□ -0.25
ABCB1-202ENST00000416177 CHRNA5P30532 468 aa13.47□□□□□ -0.25
ABCB1-202ENST00000416177 ST5P78524 1137 aa13.47□□□□□ -0.25
ABCB1-202ENST00000416177 BICDL1Q6ZP65 573 aa13.47□□□□□ -0.25
ABCB1-202ENST00000416177 CNBD1Q8NA66 436 aa13.47□□□□□ -0.25
ABCB1-202ENST00000416177 ZEB1P37275 1124 aaPredicted RBP13.46□□□□□ -0.25
ABCB1-202ENST00000416177 C2CD5Q86YS7 1000 aa13.46□□□□□ -0.25
ABCB1-202ENST00000416177 SBF1O95248 1867 aa13.46□□□□□ -0.26
ABCB1-202ENST00000416177 ANKRD31Q8N7Z5 1873 aa13.45□□□□□ -0.26
ABCB1-202ENST00000416177 SENP3-EIF4A1A0A087X0R7 540 aa13.45□□□□□ -0.26
ABCB1-202ENST00000416177 ERVV-1B6SEH8 477 aa13.45□□□□□ -0.26
ABCB1-202ENST00000416177 EIF4A1P60842 406 aaKnown RBP13.45□□□□□ -0.26
ABCB1-202ENST00000416177 SOGA3Q5TF21 947 aa13.45□□□□□ -0.26
ABCB1-202ENST00000416177 PRR5LQ6MZQ0 368 aa13.45□□□□□ -0.26
ABCB1-202ENST00000416177 CNKSR1Q969H4 720 aa13.45□□□□□ -0.26
ABCB1-202ENST00000416177 KDM2BQ8NHM5 1336 aa13.44□□□□□ -0.26
ABCB1-202ENST00000416177 RIPK4P57078 832 aa13.44□□□□□ -0.26
ABCB1-202ENST00000416177 WDR43Q15061 677 aaKnown RBP eCLIP13.44□□□□□ -0.26
ABCB1-202ENST00000416177 C9orf131Q5VYM1 1079 aa13.44□□□□□ -0.26
ABCB1-202ENST00000416177 TPTE2Q6XPS3 522 aa13.44□□□□□ -0.26
ABCB1-202ENST00000416177 ARFGEF2Q9Y6D5 1785 aa13.44□□□□□ -0.26
ABCB1-202ENST00000416177 PRAMEF22A3QJZ6 481 aa13.43□□□□□ -0.26
ABCB1-202ENST00000416177 NBPF26B4DH59 902 aa13.43□□□□□ -0.26
ABCB1-202ENST00000416177 LMNB1P20700 586 aa13.43□□□□□ -0.26
ABCB1-202ENST00000416177 TMPOP42166 694 aaKnown RBP13.43□□□□□ -0.26
ABCB1-202ENST00000416177 STYK1Q6J9G0 422 aa13.43□□□□□ -0.26
ABCB1-202ENST00000416177 NBPF10Q6P3W6 841 aaKnown RBP13.43□□□□□ -0.26
ABCB1-202ENST00000416177 NBPF5PQ86XG9 351 aaPredicted RBP13.43□□□□□ -0.26
ABCB1-202ENST00000416177 NBPF15Q8N660 670 aa13.43□□□□□ -0.26
ABCB1-202ENST00000416177 RUNDC1Q96C34 613 aa13.43□□□□□ -0.26
ABCB1-202ENST00000416177 TSPYL4Q9UJ04 414 aa13.43□□□□□ -0.26
ABCB1-202ENST00000416177 SSUH2Q9Y2M2 353 aa13.43□□□□□ -0.26
ABCB1-202ENST00000416177 TOMM70O94826 608 aa13.42□□□□□ -0.26
ABCB1-202ENST00000416177 KIF6Q6ZMV9 814 aa13.42□□□□□ -0.26
ABCB1-202ENST00000416177 MASTLQ96GX5 879 aa13.42□□□□□ -0.26
ABCB1-202ENST00000416177 NYXQ9GZU5 481 aa13.42□□□□□ -0.26
ABCB1-202ENST00000416177 RNF181Q9P0P0 153 aa13.42□□□□□ -0.26
ABCB1-202ENST00000416177 TNRC6CQ9HCJ0 1690 aaKnown RBP13.42□□□□□ -0.26
ABCB1-202ENST00000416177 IBTKQ9P2D0 1353 aaPredicted RBP13.42□□□□□ -0.26
ABCB1-202ENST00000416177 KIF3CO14782 793 aa13.41□□□□□ -0.26
ABCB1-202ENST00000416177 ZNF526Q8TF50 670 aaPredicted RBP13.41□□□□□ -0.26
ABCB1-202ENST00000416177 ZNF622Q969S3 477 aaKnown RBP eCLIP13.41□□□□□ -0.26
ABCB1-202ENST00000416177 PRKRIP1Q9H875 184 aaPredicted RBP13.41□□□□□ -0.26
ABCB1-202ENST00000416177 MIS18AQ9NYP9 233 aa13.41□□□□□ -0.26
ABCB1-202ENST00000416177 NIP7Q9Y221 180 aaKnown RBP eCLIP13.41□□□□□ -0.26
ABCB1-202ENST00000416177 NUP98P52948 1817 aa13.41□□□□□ -0.26
ABCB1-202ENST00000416177 MAP3K15Q6ZN16 1313 aa13.4□□□□□ -0.26
ABCB1-202ENST00000416177 LTBP3Q9NS15 1303 aa13.4□□□□□ -0.26
ABCB1-202ENST00000416177 FER1L6Q2WGJ9 1857 aa13.4□□□□□ -0.26
ABCB1-202ENST00000416177 COL11A2P13942 1736 aaPredicted RBP13.4□□□□□ -0.26
ABCB1-202ENST00000416177 KLRG2A4D1S0 409 aaPredicted RBP13.4□□□□□ -0.26
ABCB1-202ENST00000416177 SRGNP10124 158 aa13.4□□□□□ -0.26
ABCB1-202ENST00000416177 DICER1Q9UPY3 1922 aaKnown RBP13.4□□□□□ -0.26
ABCB1-202ENST00000416177 RIC1Q4ADV7 1423 aa13.39□□□□□ -0.27
ABCB1-202ENST00000416177 NPR1P16066 1061 aa13.39□□□□□ -0.27
ABCB1-202ENST00000416177 HSPA6P17066 643 aa13.39□□□□□ -0.27
ABCB1-202ENST00000416177 C16orf71Q8IYS4 520 aaPredicted RBP13.39□□□□□ -0.27
ABCB1-202ENST00000416177 PIP4P2Q8N4L2 257 aa13.39□□□□□ -0.27
ABCB1-202ENST00000416177 CCDC88AQ3V6T2 1871 aa13.38□□□□□ -0.27
ABCB1-202ENST00000416177 HOXB7P09629 217 aa13.38□□□□□ -0.27
ABCB1-202ENST00000416177 GTF2E1P29083 439 aaPredicted RBP13.38□□□□□ -0.27
ABCB1-202ENST00000416177 ALDH1B1P30837 517 aa13.38□□□□□ -0.27
ABCB1-202ENST00000416177 PIP4K2AP48426 406 aaPredicted RBP13.38□□□□□ -0.27
ABCB1-202ENST00000416177 CALD1Q05682 793 aaKnown RBP13.38□□□□□ -0.27
ABCB1-202ENST00000416177 THUMPD2Q9BTF0 503 aaKnown RBP13.38□□□□□ -0.27
ABCB1-202ENST00000416177 RNF123Q5XPI4 1314 aa13.38□□□□□ -0.27
ABCB1-202ENST00000416177 PARP10Q53GL7 1025 aa13.37□□□□□ -0.27
ABCB1-202ENST00000416177 HSP90AB3PQ58FF7 597 aa13.37□□□□□ -0.27
ABCB1-202ENST00000416177 DPY19L2Q6NUT2 758 aa13.37□□□□□ -0.27
ABCB1-202ENST00000416177 GIGYF2Q6Y7W6 1299 aaKnown RBP13.37□□□□□ -0.27
ABCB1-202ENST00000416177 RBM46Q8TBY0 533 aaKnown RBP13.37□□□□□ -0.27
ABCB1-202ENST00000416177 CHMP4AQ9BY43 222 aa13.37□□□□□ -0.27
ABCB1-202ENST00000416177 TAOK3Q9H2K8 898 aa13.37□□□□□ -0.27
ABCB1-202ENST00000416177 RRP7AQ9Y3A4 280 aaKnown RBP13.37□□□□□ -0.27
ABCB1-202ENST00000416177 TIAM2Q8IVF5 1701 aa13.36□□□□□ -0.27
ABCB1-202ENST00000416177 CACNA1SQ13698 1873 aa13.36□□□□□ -0.27
ABCB1-202ENST00000416177 GLTPD2A6NH11 291 aa13.36□□□□□ -0.27
ABCB1-202ENST00000416177 CHL1O00533 1208 aa13.36□□□□□ -0.27
ABCB1-202ENST00000416177 RASSF7Q02833 373 aa13.36□□□□□ -0.27
ABCB1-202ENST00000416177 HLFQ16534 295 aa13.36□□□□□ -0.27
ABCB1-202ENST00000416177 GRIPAP1Q4V328 841 aa13.36□□□□□ -0.27
ABCB1-202ENST00000416177 PRPF40BQ6NWY9 871 aaKnown RBP13.36□□□□□ -0.27
ABCB1-202ENST00000416177 PPP1R42Q7Z4L9 355 aa13.36□□□□□ -0.27
ABCB1-202ENST00000416177 ADAMTS8Q9UP79 889 aa13.36□□□□□ -0.27
ABCB1-202ENST00000416177 SLX4Q8IY92 1834 aa13.35□□□□□ -0.27
ABCB1-202ENST00000416177 NFKBIEO00221 500 aa13.35□□□□□ -0.27
ABCB1-202ENST00000416177 C21orf2O43822 256 aa13.35□□□□□ -0.27
ABCB1-202ENST00000416177 MYL6BP14649 208 aa13.35□□□□□ -0.27
ABCB1-202ENST00000416177 FXR2P51116 673 aaKnown RBP eCLIP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms