RNA–Protein interactions for RNA: ENST00000415409.5

HDAC8-211, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 913 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-211ENST00000415409 LGR6Q9HBX8 967 aa8.42□□□□□ -1.06
HDAC8-211ENST00000415409 SPATA31A6Q5VVP1 1343 aa8.42□□□□□ -1.06
HDAC8-211ENST00000415409 NHSL1Q5SYE7 1610 aa8.42□□□□□ -1.06
HDAC8-211ENST00000415409 BTBD11A6QL63 1104 aa8.41□□□□□ -1.06
HDAC8-211ENST00000415409 FOSBP53539 338 aa8.41□□□□□ -1.06
HDAC8-211ENST00000415409 CCDC30Q5VVM6 783 aa8.41□□□□□ -1.06
HDAC8-211ENST00000415409 IFNL2Q8IZJ0 200 aa8.41□□□□□ -1.06
HDAC8-211ENST00000415409 CARD10Q9BWT7 1032 aa8.41□□□□□ -1.06
HDAC8-211ENST00000415409 TNNQ9UQP3 1299 aa8.41□□□□□ -1.06
HDAC8-211ENST00000415409 VPS9D1Q9Y2B5 631 aa8.41□□□□□ -1.06
HDAC8-211ENST00000415409 OVOS2A0A0G2JMS6 1433 aa8.4□□□□□ -1.06
HDAC8-211ENST00000415409 PTPRCP08575 1304 aa8.4□□□□□ -1.06
HDAC8-211ENST00000415409 GOLGA8CPA6NN73 597 aa8.4□□□□□ -1.06
HDAC8-211ENST00000415409 TCERG1O14776 1098 aaKnown RBP8.4□□□□□ -1.06
HDAC8-211ENST00000415409 HOXB7P09629 217 aa8.4□□□□□ -1.06
HDAC8-211ENST00000415409 PHKG2P15735 406 aa8.4□□□□□ -1.06
HDAC8-211ENST00000415409 KRT24Q2M2I5 525 aa8.4□□□□□ -1.06
HDAC8-211ENST00000415409 TMEM57Q8N5G2 664 aa8.4□□□□□ -1.06
HDAC8-211ENST00000415409 DCAF5Q96JK2 942 aa8.4□□□□□ -1.06
HDAC8-211ENST00000415409 RWDD1Q9H446 243 aaPredicted RBP8.4□□□□□ -1.06
HDAC8-211ENST00000415409 STRN4Q9NRL3 753 aa8.4□□□□□ -1.06
HDAC8-211ENST00000415409 KDM2BQ8NHM5 1336 aa8.39□□□□□ -1.07
HDAC8-211ENST00000415409 IL2RBP14784 551 aa8.39□□□□□ -1.07
HDAC8-211ENST00000415409 EIF4A1P60842 406 aaKnown RBP8.39□□□□□ -1.07
HDAC8-211ENST00000415409 HDGFL1Q5TGJ6 251 aa8.39□□□□□ -1.07
HDAC8-211ENST00000415409 POTEAQ6S8J7 498 aa8.39□□□□□ -1.07
HDAC8-211ENST00000415409 ZCRB1Q8TBF4 217 aaKnown RBP8.39□□□□□ -1.07
HDAC8-211ENST00000415409 ZDHHC16Q969W1 377 aa8.39□□□□□ -1.07
HDAC8-211ENST00000415409 BTG4Q9NY30 223 aa8.39□□□□□ -1.07
HDAC8-211ENST00000415409 ABCC4O15439 1325 aa8.38□□□□□ -1.07
HDAC8-211ENST00000415409 PCDH11XQ9BZA7 1347 aa8.38□□□□□ -1.07
HDAC8-211ENST00000415409 PCDH11YQ9BZA8 1340 aa8.38□□□□□ -1.07
HDAC8-211ENST00000415409 PTPN5P54829 565 aa8.38□□□□□ -1.07
HDAC8-211ENST00000415409 LARP1Q6PKG0 1096 aaKnown RBP8.38□□□□□ -1.07
HDAC8-211ENST00000415409 SLC52A2Q9HAB3 445 aa8.38□□□□□ -1.07
HDAC8-211ENST00000415409 COL5A2P05997 1499 aaPredicted RBP8.38□□□□□ -1.07
HDAC8-211ENST00000415409 LTN1O94822 1766 aa8.38□□□□□ -1.07
HDAC8-211ENST00000415409 CABP4P57796 275 aa8.37□□□□□ -1.07
HDAC8-211ENST00000415409 MFSD10Q14728 455 aa8.37□□□□□ -1.07
HDAC8-211ENST00000415409 ZNF772Q68DY9 489 aaPredicted RBP8.37□□□□□ -1.07
HDAC8-211ENST00000415409 ANO8Q9HCE9 1232 aaPredicted RBP8.37□□□□□ -1.07
HDAC8-211ENST00000415409 TSHZ2Q9NRE2 1034 aa8.37□□□□□ -1.07
HDAC8-211ENST00000415409 ZBTB40Q9NUA8 1239 aa8.37□□□□□ -1.07
HDAC8-211ENST00000415409 MEGF6O75095 1541 aa8.37□□□□□ -1.07
HDAC8-211ENST00000415409 CAMTA1Q9Y6Y1 1673 aa8.37□□□□□ -1.07
HDAC8-211ENST00000415409 CYP27B1O15528 508 aa8.36□□□□□ -1.07
HDAC8-211ENST00000415409 CCT4P50991 539 aaKnown RBP8.36□□□□□ -1.07
HDAC8-211ENST00000415409 INTS3Q68E01 1043 aaKnown RBP8.36□□□□□ -1.07
HDAC8-211ENST00000415409 TTC5Q8N0Z6 440 aa8.36□□□□□ -1.07
HDAC8-211ENST00000415409 NECTIN2Q92692 538 aa8.36□□□□□ -1.07
HDAC8-211ENST00000415409 SLC4A5Q9BY07 1137 aa8.36□□□□□ -1.07
HDAC8-211ENST00000415409 ADAM33Q9BZ11 813 aa8.36□□□□□ -1.07
HDAC8-211ENST00000415409 PCDHB15Q9Y5E8 787 aa8.36□□□□□ -1.07
HDAC8-211ENST00000415409 LMO7Q8WWI1 1683 aa8.36□□□□□ -1.07
HDAC8-211ENST00000415409 ERVV-2B6SEH9 535 aa8.35□□□□□ -1.07
HDAC8-211ENST00000415409 ZBTB7BO15156 539 aaPredicted RBP8.35□□□□□ -1.07
HDAC8-211ENST00000415409 KCNQ3O43525 872 aa8.35□□□□□ -1.07
HDAC8-211ENST00000415409 ADAMTS2O95450 1211 aa8.35□□□□□ -1.07
HDAC8-211ENST00000415409 IGHDP01880 384 aa8.35□□□□□ -1.07
HDAC8-211ENST00000415409 EIF2S2P20042 333 aaKnown RBP8.35□□□□□ -1.07
HDAC8-211ENST00000415409 FLIIQ13045 1269 aa8.35□□□□□ -1.07
HDAC8-211ENST00000415409 HDAC1Q13547 482 aaPredicted RBP8.35□□□□□ -1.07
HDAC8-211ENST00000415409 NFATC2IPQ8NCF5 419 aa8.35□□□□□ -1.07
HDAC8-211ENST00000415409 ZBED2Q9BTP6 218 aa8.35□□□□□ -1.07
HDAC8-211ENST00000415409 EMILIN3Q9NT22 766 aa8.35□□□□□ -1.07
HDAC8-211ENST00000415409 LRP6O75581 1613 aa8.34□□□□□ -1.07
HDAC8-211ENST00000415409 NUTM2BA6NNL0 878 aaPredicted RBP8.34□□□□□ -1.07
HDAC8-211ENST00000415409 NUTM2EB1AL46 878 aaPredicted RBP8.34□□□□□ -1.07
HDAC8-211ENST00000415409 GIGYF1O75420 1035 aaPredicted RBP8.34□□□□□ -1.07
HDAC8-211ENST00000415409 FKBP5Q13451 457 aaPredicted RBP8.34□□□□□ -1.07
HDAC8-211ENST00000415409 ZNF790Q6PG37 636 aa8.34□□□□□ -1.07
HDAC8-211ENST00000415409 G2E3Q7L622 706 aa8.34□□□□□ -1.07
HDAC8-211ENST00000415409 NUTM2AQ8IVF1 878 aaPredicted RBP8.34□□□□□ -1.07
HDAC8-211ENST00000415409 DDX54Q8TDD1 881 aaKnown RBP8.34□□□□□ -1.07
HDAC8-211ENST00000415409 CDCA7Q9BWT1 371 aaPredicted RBP8.34□□□□□ -1.07
HDAC8-211ENST00000415409 NBPF3Q9H094 633 aa8.34□□□□□ -1.07
HDAC8-211ENST00000415409 RTN4Q9NQC3 1192 aaKnown RBP8.34□□□□□ -1.07
HDAC8-211ENST00000415409 USP35Q9P2H5 1018 aa8.34□□□□□ -1.07
HDAC8-211ENST00000415409 DBF4Q9UBU7 674 aaPredicted RBP8.34□□□□□ -1.07
HDAC8-211ENST00000415409 LRRC37A3O60309 1634 aa8.33□□□□□ -1.08
HDAC8-211ENST00000415409 COL18A1P39060 1754 aa8.33□□□□□ -1.08
HDAC8-211ENST00000415409 KDM6AO15550 1401 aaPredicted RBP8.33□□□□□ -1.08
HDAC8-211ENST00000415409 SLC4A10Q6U841 1118 aa8.33□□□□□ -1.08
HDAC8-211ENST00000415409 WNT2BQ93097 391 aa8.33□□□□□ -1.08
HDAC8-211ENST00000415409 FMNL2Q96PY5 1086 aa8.33□□□□□ -1.08
HDAC8-211ENST00000415409 EXOC5O00471 708 aa8.32□□□□□ -1.08
HDAC8-211ENST00000415409 SNRPA1P09661 255 aaKnown RBP8.32□□□□□ -1.08
HDAC8-211ENST00000415409 SLC39A6Q13433 755 aa8.32□□□□□ -1.08
HDAC8-211ENST00000415409 MEX3CQ5U5Q3 659 aaKnown RBP8.32□□□□□ -1.08
HDAC8-211ENST00000415409 HYPKQ9NX55 129 aa8.32□□□□□ -1.08
HDAC8-211ENST00000415409 CHPF2Q9P2E5 772 aa8.32□□□□□ -1.08
HDAC8-211ENST00000415409 THRAP3Q9Y2W1 955 aaKnown RBP8.32□□□□□ -1.08
HDAC8-211ENST00000415409 HEG1Q9ULI3 1381 aa8.32□□□□□ -1.08
HDAC8-211ENST00000415409 CRYBG1Q9Y4K1 1723 aa8.32□□□□□ -1.08
HDAC8-211ENST00000415409 F6X3S4 739 aa8.31□□□□□ -1.08
HDAC8-211ENST00000415409 DDX58O95786 925 aaKnown RBP8.31□□□□□ -1.08
HDAC8-211ENST00000415409 GNAI3P08754 354 aa8.31□□□□□ -1.08
HDAC8-211ENST00000415409 RPAP2Q8IXW5 612 aaPredicted RBP8.31□□□□□ -1.08
HDAC8-211ENST00000415409 GCC1Q96CN9 775 aa8.31□□□□□ -1.08
HDAC8-211ENST00000415409 COL22A1Q8NFW1 1626 aaPredicted RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms