RNA–Protein interactions for RNA: ENST00000415220.6

PRKD1-202, Transcript of protein kinase D1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRKD1, Length 3,189 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD1-202ENST00000415220 SUCLG2Q96I99 432 aa17.73■□□□□ 0.43
PRKD1-202ENST00000415220 RNF214Q8ND24 703 aa17.73■□□□□ 0.43
PRKD1-202ENST00000415220 KLHDC4Q8TBB5 520 aa17.73■□□□□ 0.43
PRKD1-202ENST00000415220 TRHP20396 242 aaPredicted RBP17.72■□□□□ 0.43
PRKD1-202ENST00000415220 LRSAM1Q6UWE0 723 aa17.72■□□□□ 0.43
PRKD1-202ENST00000415220 TLR7Q9NYK1 1049 aaKnown RBP17.72■□□□□ 0.43
PRKD1-202ENST00000415220 KSR2Q6VAB6 950 aa17.72■□□□□ 0.43
PRKD1-202ENST00000415220 HEG1Q9ULI3 1381 aa17.72■□□□□ 0.43
PRKD1-202ENST00000415220 SIPA1L3O60292 1781 aaPredicted RBP17.71■□□□□ 0.43
PRKD1-202ENST00000415220 USP42Q9H9J4 1324 aaKnown RBP17.71■□□□□ 0.43
PRKD1-202ENST00000415220 PIP4K2AP48426 406 aaPredicted RBP17.71■□□□□ 0.43
PRKD1-202ENST00000415220 MTX1Q13505 466 aa17.71■□□□□ 0.43
PRKD1-202ENST00000415220 PDIA6Q15084 440 aa17.71■□□□□ 0.43
PRKD1-202ENST00000415220 USP48Q86UV5 1035 aa17.71■□□□□ 0.43
PRKD1-202ENST00000415220 SLIT3O75094 1523 aa17.71■□□□□ 0.43
PRKD1-202ENST00000415220 ZC3H6P61129 1189 aaKnown RBP17.71■□□□□ 0.42
PRKD1-202ENST00000415220 AMOTQ4VCS5 1084 aa17.71■□□□□ 0.42
PRKD1-202ENST00000415220 BICC1Q9H694 974 aaKnown RBP17.71■□□□□ 0.42
PRKD1-202ENST00000415220 NCAPD2Q15021 1401 aa17.7■□□□□ 0.42
PRKD1-202ENST00000415220 SASH1O94885 1247 aa17.7■□□□□ 0.42
PRKD1-202ENST00000415220 CASTP20810 708 aaKnown RBP17.7■□□□□ 0.42
PRKD1-202ENST00000415220 JARID2Q92833 1246 aaPredicted RBP17.7■□□□□ 0.42
PRKD1-202ENST00000415220 DDX17Q92841 729 aaKnown RBP17.7■□□□□ 0.42
PRKD1-202ENST00000415220 AACSQ86V21 672 aa17.7■□□□□ 0.42
PRKD1-202ENST00000415220 CCDC8Q9H0W5 538 aaPredicted RBP17.7■□□□□ 0.42
PRKD1-202ENST00000415220 SIL1Q9H173 461 aa17.7■□□□□ 0.42
PRKD1-202ENST00000415220 PRPF40BQ6NWY9 871 aaKnown RBP17.69■□□□□ 0.42
PRKD1-202ENST00000415220 CLASRPQ8N2M8 674 aaKnown RBP17.69■□□□□ 0.42
PRKD1-202ENST00000415220 CNPY2Q9Y2B0 182 aa17.69■□□□□ 0.42
PRKD1-202ENST00000415220 C5P01031 1676 aa17.69■□□□□ 0.42
PRKD1-202ENST00000415220 GLRX3O76003 335 aaKnown RBP17.69■□□□□ 0.42
PRKD1-202ENST00000415220 FAM227BQ96M60 508 aa17.69■□□□□ 0.42
PRKD1-202ENST00000415220 DIAPH3Q9NSV4 1193 aa17.69■□□□□ 0.42
PRKD1-202ENST00000415220 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.69■□□□□ 0.42
PRKD1-202ENST00000415220 TTC41PQ6P2S7 1318 aa17.69■□□□□ 0.42
PRKD1-202ENST00000415220 MYL6BP14649 208 aa17.69■□□□□ 0.42
PRKD1-202ENST00000415220 EAF2Q96CJ1 260 aaPredicted RBP17.69■□□□□ 0.42
PRKD1-202ENST00000415220 ECHDC1Q9NTX5 307 aa17.69■□□□□ 0.42
PRKD1-202ENST00000415220 IGKV5-2P06315 115 aa17.68■□□□□ 0.42
PRKD1-202ENST00000415220 ANP32BQ92688 251 aaKnown RBP17.68■□□□□ 0.42
PRKD1-202ENST00000415220 TRPM3Q9HCF6 1732 aaPredicted RBP17.68■□□□□ 0.42
PRKD1-202ENST00000415220 IFIT2P09913 472 aaKnown RBP17.67■□□□□ 0.42
PRKD1-202ENST00000415220 ST3GAL1Q11201 340 aa17.67■□□□□ 0.42
PRKD1-202ENST00000415220 HSP90AB4PQ58FF6 505 aa17.67■□□□□ 0.42
PRKD1-202ENST00000415220 KIAA1211Q6ZU35 1233 aa17.67■□□□□ 0.42
PRKD1-202ENST00000415220 ZSCAN30Q86W11 494 aa17.67■□□□□ 0.42
PRKD1-202ENST00000415220 PDLIM2Q96JY6 352 aa17.67■□□□□ 0.42
PRKD1-202ENST00000415220 GRM8O00222 908 aa17.67■□□□□ 0.42
PRKD1-202ENST00000415220 ALDH1L1O75891 902 aa17.67■□□□□ 0.42
PRKD1-202ENST00000415220 HYPKQ9NX55 129 aa17.67■□□□□ 0.42
PRKD1-202ENST00000415220 EPHA10Q5JZY3 1008 aa17.67■□□□□ 0.42
PRKD1-202ENST00000415220 JAKMIP1Q96N16 626 aaKnown RBP17.67■□□□□ 0.42
PRKD1-202ENST00000415220 TAF6LQ9Y6J9 622 aa17.67■□□□□ 0.42
PRKD1-202ENST00000415220 ZNF142P52746 1687 aaPredicted RBP17.67■□□□□ 0.42
PRKD1-202ENST00000415220 CAMTA1Q9Y6Y1 1673 aa17.66■□□□□ 0.42
PRKD1-202ENST00000415220 MBD3O95983 291 aa17.66■□□□□ 0.42
PRKD1-202ENST00000415220 KRT28Q7Z3Y7 464 aa17.66■□□□□ 0.42
PRKD1-202ENST00000415220 CCDC83Q8IWF9 413 aa17.66■□□□□ 0.42
PRKD1-202ENST00000415220 WDR33Q9C0J8 1336 aaKnown RBP17.66■□□□□ 0.42
PRKD1-202ENST00000415220 SYT1P21579 422 aa17.66■□□□□ 0.42
PRKD1-202ENST00000415220 LIMCH1Q9UPQ0 1083 aa17.66■□□□□ 0.42
PRKD1-202ENST00000415220 EPB41L2O43491 1005 aaKnown RBP17.65■□□□□ 0.42
PRKD1-202ENST00000415220 EDC3Q96F86 508 aaKnown RBP17.65■□□□□ 0.42
PRKD1-202ENST00000415220 KDM6AO15550 1401 aaPredicted RBP17.65■□□□□ 0.42
PRKD1-202ENST00000415220 NMIQ13287 307 aaPredicted RBP17.65■□□□□ 0.42
PRKD1-202ENST00000415220 LINS1Q8NG48 757 aa17.65■□□□□ 0.42
PRKD1-202ENST00000415220 ERBB3P21860 1342 aa17.64■□□□□ 0.42
PRKD1-202ENST00000415220 CHGBP05060 677 aa17.64■□□□□ 0.41
PRKD1-202ENST00000415220 NFATC2IPQ8NCF5 419 aa17.64■□□□□ 0.41
PRKD1-202ENST00000415220 TCEANC2Q96MN5 208 aa17.64■□□□□ 0.41
PRKD1-202ENST00000415220 DDX21Q9NR30 783 aaKnown RBP eCLIP17.64■□□□□ 0.41
PRKD1-202ENST00000415220 NPHP4O75161 1426 aaPredicted RBP17.64■□□□□ 0.41
PRKD1-202ENST00000415220 NECAB1Q8N987 351 aa17.64■□□□□ 0.41
PRKD1-202ENST00000415220 BOLA2Q9H3K6 86 aa17.64■□□□□ 0.41
PRKD1-202ENST00000415220 NDUFB9Q9Y6M9 179 aa17.64■□□□□ 0.41
PRKD1-202ENST00000415220 ZSCAN22P10073 491 aaPredicted RBP17.63■□□□□ 0.41
PRKD1-202ENST00000415220 A0A0D9SFI3 127 aa17.63■□□□□ 0.41
PRKD1-202ENST00000415220 STX6O43752 255 aa17.63■□□□□ 0.41
PRKD1-202ENST00000415220 ZNF790Q6PG37 636 aa17.63■□□□□ 0.41
PRKD1-202ENST00000415220 ADAMTS7Q9UKP4 1686 aa17.63■□□□□ 0.41
PRKD1-202ENST00000415220 NECTIN1Q15223 517 aa17.63■□□□□ 0.41
PRKD1-202ENST00000415220 RIC3Q7Z5B4 369 aa17.63■□□□□ 0.41
PRKD1-202ENST00000415220 XAGE3Q8WTP9 111 aa17.63■□□□□ 0.41
PRKD1-202ENST00000415220 PDRG1Q9NUG6 133 aa17.63■□□□□ 0.41
PRKD1-202ENST00000415220 OVOS2A0A0G2JMS6 1433 aa17.62■□□□□ 0.41
PRKD1-202ENST00000415220 CABLES1Q8TDN4 633 aa17.62■□□□□ 0.41
PRKD1-202ENST00000415220 RBM8AQ9Y5S9 174 aaKnown RBP17.62■□□□□ 0.41
PRKD1-202ENST00000415220 UTYO14607 1347 aa17.62■□□□□ 0.41
PRKD1-202ENST00000415220 CCDC171Q6TFL3 1326 aa17.62■□□□□ 0.41
PRKD1-202ENST00000415220 GJB2P29033 226 aa17.62■□□□□ 0.41
PRKD1-202ENST00000415220 ME3Q16798 604 aa17.62■□□□□ 0.41
PRKD1-202ENST00000415220 EVI5LQ96CN4 794 aa17.62■□□□□ 0.41
PRKD1-202ENST00000415220 MYD88Q99836 296 aa17.62■□□□□ 0.41
PRKD1-202ENST00000415220 NLRP2Q9NX02 1062 aa17.62■□□□□ 0.41
PRKD1-202ENST00000415220 SMC3Q9UQE7 1217 aa17.62■□□□□ 0.41
PRKD1-202ENST00000415220 FIBPO43427 364 aa17.61■□□□□ 0.41
PRKD1-202ENST00000415220 COPS6Q7L5N1 327 aa17.61■□□□□ 0.41
PRKD1-202ENST00000415220 MPNDQ8N594 471 aa17.61■□□□□ 0.41
PRKD1-202ENST00000415220 TSPY26PQ9H489 355 aa17.61■□□□□ 0.41
PRKD1-202ENST00000415220 MEGF6O75095 1541 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms