RNA–Protein interactions for RNA: ENST00000415138.1

LINC01888-201, Transcript of long intergenic non-protein coding RNA 1888, humanhuman

TSL 2

Gene LINC01888, Length 436 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01888-201ENST00000415138 COL3A1P02461 1466 aaPredicted RBP12.31□□□□□ -0.44
LINC01888-201ENST00000415138 PCDH11XQ9BZA7 1347 aa12.31□□□□□ -0.44
LINC01888-201ENST00000415138 PCDH11YQ9BZA8 1340 aa12.31□□□□□ -0.44
LINC01888-201ENST00000415138 OVOS2A0A0G2JMS6 1433 aa12.3□□□□□ -0.44
LINC01888-201ENST00000415138 AEBP1Q8IUX7 1158 aa12.3□□□□□ -0.44
LINC01888-201ENST00000415138 SLC4A5Q9BY07 1137 aa12.3□□□□□ -0.44
LINC01888-201ENST00000415138 PCDHGA10Q9Y5H3 936 aa12.3□□□□□ -0.44
LINC01888-201ENST00000415138 MAPK8IP3Q9UPT6 1336 aa12.3□□□□□ -0.44
LINC01888-201ENST00000415138 DISP2A7MBM2 1401 aa12.29□□□□□ -0.44
LINC01888-201ENST00000415138 TNS2Q63HR2 1409 aa12.29□□□□□ -0.44
LINC01888-201ENST00000415138 MEGF6O75095 1541 aa12.29□□□□□ -0.44
LINC01888-201ENST00000415138 IFNL2Q8IZJ0 200 aa12.29□□□□□ -0.44
LINC01888-201ENST00000415138 WDR70Q9NW82 654 aa12.29□□□□□ -0.44
LINC01888-201ENST00000415138 HCSTQ9UBK5 93 aa12.29□□□□□ -0.44
LINC01888-201ENST00000415138 PKD1L3Q7Z443 1732 aa12.28□□□□□ -0.44
LINC01888-201ENST00000415138 PHF14O94880 888 aa12.28□□□□□ -0.44
LINC01888-201ENST00000415138 HSP90AB1P08238 724 aaKnown RBP12.28□□□□□ -0.44
LINC01888-201ENST00000415138 PRKAR2BP31323 418 aa12.28□□□□□ -0.44
LINC01888-201ENST00000415138 FAM182BQ5T319 152 aa12.28□□□□□ -0.44
LINC01888-201ENST00000415138 TYW1BQ6NUM6 668 aa12.28□□□□□ -0.44
LINC01888-201ENST00000415138 ZNF530Q6P9A1 599 aaPredicted RBP12.28□□□□□ -0.44
LINC01888-201ENST00000415138 FBXW7Q969H0 707 aa12.28□□□□□ -0.44
LINC01888-201ENST00000415138 KDRP35968 1356 aa12.28□□□□□ -0.44
LINC01888-201ENST00000415138 PLEKHG2Q9H7P9 1386 aa12.28□□□□□ -0.44
LINC01888-201ENST00000415138 NCAPD2Q15021 1401 aa12.28□□□□□ -0.44
LINC01888-201ENST00000415138 VIRMAQ69YN4 1812 aaKnown RBP12.27□□□□□ -0.44
LINC01888-201ENST00000415138 MARCH10Q8NA82 808 aaPredicted RBP12.27□□□□□ -0.45
LINC01888-201ENST00000415138 GAS2L2Q8NHY3 880 aa12.27□□□□□ -0.45
LINC01888-201ENST00000415138 SBF2Q86WG5 1849 aa12.27□□□□□ -0.45
LINC01888-201ENST00000415138 SHANK3Q9BYB0 1731 aa12.26□□□□□ -0.45
LINC01888-201ENST00000415138 CCDC125Q86Z20 511 aa12.26□□□□□ -0.45
LINC01888-201ENST00000415138 SYTL4Q96C24 671 aaPredicted RBP12.26□□□□□ -0.45
LINC01888-201ENST00000415138 KCTD12Q96CX2 325 aaKnown RBP12.26□□□□□ -0.45
LINC01888-201ENST00000415138 ZBED2Q9BTP6 218 aa12.26□□□□□ -0.45
LINC01888-201ENST00000415138 NBR1Q14596 966 aa12.25□□□□□ -0.45
LINC01888-201ENST00000415138 TEX2Q8IWB9 1127 aa12.25□□□□□ -0.45
LINC01888-201ENST00000415138 RTF1Q92541 710 aaKnown RBP12.25□□□□□ -0.45
LINC01888-201ENST00000415138 CCER2I3L3R5 266 aa12.24□□□□□ -0.45
LINC01888-201ENST00000415138 PHKG2P15735 406 aa12.24□□□□□ -0.45
LINC01888-201ENST00000415138 AKAP4Q5JQC9 854 aa12.24□□□□□ -0.45
LINC01888-201ENST00000415138 FAM9BQ8IZU0 186 aa12.24□□□□□ -0.45
LINC01888-201ENST00000415138 RUNDC1Q96C34 613 aa12.24□□□□□ -0.45
LINC01888-201ENST00000415138 ACSBG1Q96GR2 724 aa12.24□□□□□ -0.45
LINC01888-201ENST00000415138 EPAS1Q99814 870 aa12.24□□□□□ -0.45
LINC01888-201ENST00000415138 ADAMTS8Q9UP79 889 aa12.24□□□□□ -0.45
LINC01888-201ENST00000415138 DLG5Q8TDM6 1919 aa12.23□□□□□ -0.45
LINC01888-201ENST00000415138 ITGB4P16144 1822 aa12.23□□□□□ -0.45
LINC01888-201ENST00000415138 DOT1LQ8TEK3 1739 aa12.23□□□□□ -0.45
LINC01888-201ENST00000415138 GNAT3A8MTJ3 354 aa12.23□□□□□ -0.45
LINC01888-201ENST00000415138 CYP27B1O15528 508 aa12.23□□□□□ -0.45
LINC01888-201ENST00000415138 TRIM37O94972 964 aa12.23□□□□□ -0.45
LINC01888-201ENST00000415138 CANXP27824 592 aaKnown RBP12.23□□□□□ -0.45
LINC01888-201ENST00000415138 E2F4Q16254 413 aa12.23□□□□□ -0.45
LINC01888-201ENST00000415138 MTHFSDQ2M296 383 aaKnown RBP12.23□□□□□ -0.45
LINC01888-201ENST00000415138 DCAF5Q96JK2 942 aa12.23□□□□□ -0.45
LINC01888-201ENST00000415138 GOLGA8CPA6NN73 597 aa12.22□□□□□ -0.45
LINC01888-201ENST00000415138 PPP1R3GB7ZBB8 358 aa12.22□□□□□ -0.45
LINC01888-201ENST00000415138 HSP90AA1P07900 732 aaKnown RBP12.22□□□□□ -0.45
LINC01888-201ENST00000415138 CCDC184Q52MB2 194 aa12.22□□□□□ -0.45
LINC01888-201ENST00000415138 CCDC146Q8IYE0 955 aa12.22□□□□□ -0.45
LINC01888-201ENST00000415138 PHACTR3Q96KR7 559 aa12.22□□□□□ -0.45
LINC01888-201ENST00000415138 SCN11AQ9UI33 1791 aa12.22□□□□□ -0.45
LINC01888-201ENST00000415138 APBA3O96018 575 aa12.21□□□□□ -0.45
LINC01888-201ENST00000415138 BAG6P46379 1132 aa12.21□□□□□ -0.45
LINC01888-201ENST00000415138 CABP4P57796 275 aa12.21□□□□□ -0.45
LINC01888-201ENST00000415138 MPRIPQ6WCQ1 1025 aa12.21□□□□□ -0.45
LINC01888-201ENST00000415138 MRPL50Q8N5N7 158 aaKnown RBP12.21□□□□□ -0.45
LINC01888-201ENST00000415138 PNISRQ8TF01 805 aaKnown RBP12.21□□□□□ -0.45
LINC01888-201ENST00000415138 NHSQ6T4R5 1651 aa12.2□□□□□ -0.46
LINC01888-201ENST00000415138 ERVV-2B6SEH9 535 aa12.2□□□□□ -0.46
LINC01888-201ENST00000415138 BHMG1C9JSJ3 638 aaPredicted RBP12.2□□□□□ -0.46
LINC01888-201ENST00000415138 PRIM1P49642 420 aaKnown RBP12.2□□□□□ -0.46
LINC01888-201ENST00000415138 LMOD3Q0VAK6 560 aa12.2□□□□□ -0.46
LINC01888-201ENST00000415138 TEFQ10587 303 aa12.2□□□□□ -0.46
LINC01888-201ENST00000415138 NEUROD2Q15784 382 aa12.2□□□□□ -0.46
LINC01888-201ENST00000415138 DDX12PQ92771 950 aa12.2□□□□□ -0.46
LINC01888-201ENST00000415138 NBPF3Q9H094 633 aa12.2□□□□□ -0.46
LINC01888-201ENST00000415138 TMOD3Q9NYL9 352 aa12.2□□□□□ -0.46
LINC01888-201ENST00000415138 BCL9O00512 1426 aa12.2□□□□□ -0.46
LINC01888-201ENST00000415138 MAP3K5Q99683 1374 aa12.19□□□□□ -0.46
LINC01888-201ENST00000415138 SPDYE16A6NNV3 312 aaPredicted RBP12.19□□□□□ -0.46
LINC01888-201ENST00000415138 HTATSF1O43719 755 aaKnown RBP12.19□□□□□ -0.46
LINC01888-201ENST00000415138 CDK11BP21127 795 aaKnown RBP12.19□□□□□ -0.46
LINC01888-201ENST00000415138 RIPK4P57078 832 aa12.19□□□□□ -0.46
LINC01888-201ENST00000415138 NFE2L2Q16236 605 aa12.19□□□□□ -0.46
LINC01888-201ENST00000415138 PLEKHF1Q96S99 279 aa12.19□□□□□ -0.46
LINC01888-201ENST00000415138 BTAF1O14981 1849 aa12.18□□□□□ -0.46
LINC01888-201ENST00000415138 HMGB2P26583 209 aaKnown RBP12.18□□□□□ -0.46
LINC01888-201ENST00000415138 ANP32AP39687 249 aaKnown RBP12.18□□□□□ -0.46
LINC01888-201ENST00000415138 RNMTO43148 476 aaKnown RBP12.17□□□□□ -0.46
LINC01888-201ENST00000415138 KCNQ2O43526 872 aa12.17□□□□□ -0.46
LINC01888-201ENST00000415138 COL9A1P20849 921 aa12.17□□□□□ -0.46
LINC01888-201ENST00000415138 PDIA6Q15084 440 aa12.17□□□□□ -0.46
LINC01888-201ENST00000415138 C6orf132Q5T0Z8 1188 aa12.17□□□□□ -0.46
LINC01888-201ENST00000415138 SMARCC1Q92922 1105 aaPredicted RBP12.17□□□□□ -0.46
LINC01888-201ENST00000415138 PRDM4Q9UKN5 801 aa12.17□□□□□ -0.46
LINC01888-201ENST00000415138 TNS1Q9HBL0 1735 aaKnown RBP12.17□□□□□ -0.46
LINC01888-201ENST00000415138 TMPOP42166 694 aaKnown RBP12.16□□□□□ -0.46
LINC01888-201ENST00000415138 DHX37Q8IY37 1157 aaKnown RBP12.16□□□□□ -0.46
LINC01888-201ENST00000415138 NFATC2IPQ8NCF5 419 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms