RNA–Protein interactions for RNA: ENST00000415030.6

SCN4B-202, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

TSL 1 (best)

Gene SCN4B, Length 4,480 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-202ENST00000415030 KRT32Q14532 448 aa13.68□□□□□ -0.22
SCN4B-202ENST00000415030 VPS53Q5VIR6 699 aa13.68□□□□□ -0.22
SCN4B-202ENST00000415030 ZNF396Q96N95 335 aaPredicted RBP13.68□□□□□ -0.22
SCN4B-202ENST00000415030 PRDM11Q9NQV5 511 aa13.68□□□□□ -0.22
SCN4B-202ENST00000415030 LRRC7Q96NW7 1537 aa13.68□□□□□ -0.22
SCN4B-202ENST00000415030 CKAP2LQ8IYA6 745 aa13.68□□□□□ -0.22
SCN4B-202ENST00000415030 C17orf53Q8N3J3 647 aaPredicted RBP13.68□□□□□ -0.22
SCN4B-202ENST00000415030 DEPDC5O75140 1603 aa13.68□□□□□ -0.22
SCN4B-202ENST00000415030 ATP7BP35670 1465 aa13.68□□□□□ -0.22
SCN4B-202ENST00000415030 GNAT3A8MTJ3 354 aa13.68□□□□□ -0.22
SCN4B-202ENST00000415030 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.68□□□□□ -0.22
SCN4B-202ENST00000415030 STAP2Q9UGK3 403 aa13.68□□□□□ -0.22
SCN4B-202ENST00000415030 SPG7Q9UQ90 795 aa13.68□□□□□ -0.22
SCN4B-202ENST00000415030 VWDEQ8N2E2 1590 aa13.68□□□□□ -0.22
SCN4B-202ENST00000415030 PTGS1P23219 599 aa13.67□□□□□ -0.22
SCN4B-202ENST00000415030 GABPB1Q06547 395 aaPredicted RBP13.67□□□□□ -0.22
SCN4B-202ENST00000415030 CEP135Q66GS9 1140 aa13.67□□□□□ -0.22
SCN4B-202ENST00000415030 CEP57L1Q8IYX8 460 aa13.67□□□□□ -0.22
SCN4B-202ENST00000415030 KRT222Q8N1A0 295 aa13.67□□□□□ -0.22
SCN4B-202ENST00000415030 MNS1Q8NEH6 495 aa13.67□□□□□ -0.22
SCN4B-202ENST00000415030 NPHP3Q7Z494 1330 aa13.67□□□□□ -0.22
SCN4B-202ENST00000415030 ARHGAP31Q2M1Z3 1444 aa13.67□□□□□ -0.22
SCN4B-202ENST00000415030 SGSM2O43147 1006 aa13.67□□□□□ -0.22
SCN4B-202ENST00000415030 GTF2F1P35269 517 aaKnown RBP eCLIP13.67□□□□□ -0.22
SCN4B-202ENST00000415030 TNNT3P45378 269 aaPredicted RBP13.67□□□□□ -0.22
SCN4B-202ENST00000415030 PPP1R42Q7Z4L9 355 aa13.67□□□□□ -0.22
SCN4B-202ENST00000415030 AMOTL2Q9Y2J4 779 aa13.67□□□□□ -0.22
SCN4B-202ENST00000415030 TTC5Q8N0Z6 440 aa13.67□□□□□ -0.22
SCN4B-202ENST00000415030 SNX14Q9Y5W7 946 aa13.67□□□□□ -0.22
SCN4B-202ENST00000415030 DDX58O95786 925 aaKnown RBP13.66□□□□□ -0.22
SCN4B-202ENST00000415030 KIAA1524Q8TCG1 905 aa13.66□□□□□ -0.22
SCN4B-202ENST00000415030 LARP6Q9BRS8 491 aaKnown RBP13.66□□□□□ -0.22
SCN4B-202ENST00000415030 SPTLC3Q9NUV7 552 aa13.66□□□□□ -0.22
SCN4B-202ENST00000415030 ANO6Q4KMQ2 910 aa13.66□□□□□ -0.22
SCN4B-202ENST00000415030 SDF4Q9BRK5 362 aa13.66□□□□□ -0.22
SCN4B-202ENST00000415030 EVI5LQ96CN4 794 aa13.66□□□□□ -0.22
SCN4B-202ENST00000415030 ECHDC1Q9NTX5 307 aa13.66□□□□□ -0.22
SCN4B-202ENST00000415030 CDK12Q9NYV4 1490 aaPredicted RBP13.66□□□□□ -0.22
SCN4B-202ENST00000415030 ADGRB1O14514 1584 aa13.66□□□□□ -0.22
SCN4B-202ENST00000415030 TTC41PQ6P2S7 1318 aa13.66□□□□□ -0.22
SCN4B-202ENST00000415030 FOXO3O43524 673 aa13.66□□□□□ -0.22
SCN4B-202ENST00000415030 TSC1Q92574 1164 aa13.66□□□□□ -0.22
SCN4B-202ENST00000415030 GSDMDP57764 484 aa13.65□□□□□ -0.22
SCN4B-202ENST00000415030 ANO10Q9NW15 660 aa13.65□□□□□ -0.22
SCN4B-202ENST00000415030 FAM177BA6PVY3 158 aa13.65□□□□□ -0.22
SCN4B-202ENST00000415030 TAF7Q15545 349 aaPredicted RBP13.65□□□□□ -0.22
SCN4B-202ENST00000415030 DACT1Q9NYF0 836 aa13.65□□□□□ -0.22
SCN4B-202ENST00000415030 CALCOCO1Q9P1Z2 691 aa13.65□□□□□ -0.22
SCN4B-202ENST00000415030 INO80Q9ULG1 1556 aaPredicted RBP13.65□□□□□ -0.22
SCN4B-202ENST00000415030 FILIP1Q7Z7B0 1213 aa13.65□□□□□ -0.22
SCN4B-202ENST00000415030 COL3A1P02461 1466 aaPredicted RBP13.65□□□□□ -0.22
SCN4B-202ENST00000415030 U2AF2P26368 475 aaKnown RBP eCLIP13.64□□□□□ -0.23
SCN4B-202ENST00000415030 G2E3Q7L622 706 aa13.64□□□□□ -0.23
SCN4B-202ENST00000415030 ZRANB1Q9UGI0 708 aa13.64□□□□□ -0.23
SCN4B-202ENST00000415030 SYCP1Q15431 976 aa13.64□□□□□ -0.23
SCN4B-202ENST00000415030 ZNF397Q8NF99 534 aaPredicted RBP13.64□□□□□ -0.23
SCN4B-202ENST00000415030 DNAJC5Q9H3Z4 198 aa13.64□□□□□ -0.23
SCN4B-202ENST00000415030 ZC3H6P61129 1189 aaKnown RBP13.64□□□□□ -0.23
SCN4B-202ENST00000415030 STX1AQ16623 288 aa13.64□□□□□ -0.23
SCN4B-202ENST00000415030 AACSQ86V21 672 aa13.64□□□□□ -0.23
SCN4B-202ENST00000415030 NEXNQ0ZGT2 675 aa13.63□□□□□ -0.23
SCN4B-202ENST00000415030 GNL2Q13823 731 aaKnown RBP13.63□□□□□ -0.23
SCN4B-202ENST00000415030 TM6SF1Q9BZW5 370 aa13.63□□□□□ -0.23
SCN4B-202ENST00000415030 UBAP1LF5GYI3 381 aa13.63□□□□□ -0.23
SCN4B-202ENST00000415030 STK3Q13188 491 aa13.63□□□□□ -0.23
SCN4B-202ENST00000415030 TAF7LQ5H9L4 462 aa13.62□□□□□ -0.23
SCN4B-202ENST00000415030 LUZP1Q86V48 1076 aa13.62□□□□□ -0.23
SCN4B-202ENST00000415030 ZSCAN16Q9H4T2 348 aaPredicted RBP13.62□□□□□ -0.23
SCN4B-202ENST00000415030 HMG20BQ9P0W2 317 aa13.62□□□□□ -0.23
SCN4B-202ENST00000415030 CFAP65Q6ZU64 1925 aaKnown RBP13.62□□□□□ -0.23
SCN4B-202ENST00000415030 PPRC1Q5VV67 1664 aaKnown RBP13.62□□□□□ -0.23
SCN4B-202ENST00000415030 PNMA6EA0A0J9YXQ4 647 aa13.62□□□□□ -0.23
SCN4B-202ENST00000415030 SMC2O95347 1197 aa13.62□□□□□ -0.23
SCN4B-202ENST00000415030 TOM1L2Q6ZVM7 507 aa13.62□□□□□ -0.23
SCN4B-202ENST00000415030 DNAAF4Q8WXU2 420 aa13.62□□□□□ -0.23
SCN4B-202ENST00000415030 TFIP11Q9UBB9 837 aaKnown RBP13.62□□□□□ -0.23
SCN4B-202ENST00000415030 ADAMTS2O95450 1211 aa13.62□□□□□ -0.23
SCN4B-202ENST00000415030 TUBB4AP04350 444 aa13.62□□□□□ -0.23
SCN4B-202ENST00000415030 BMS1Q14692 1282 aaKnown RBP13.62□□□□□ -0.23
SCN4B-202ENST00000415030 RUFY3Q7L099 469 aa13.62□□□□□ -0.23
SCN4B-202ENST00000415030 MLH3Q9UHC1 1453 aa13.61□□□□□ -0.23
SCN4B-202ENST00000415030 HSP90AB2PQ58FF8 381 aa13.61□□□□□ -0.23
SCN4B-202ENST00000415030 TSPYL1Q9H0U9 437 aa13.61□□□□□ -0.23
SCN4B-202ENST00000415030 TNRQ92752 1358 aa13.61□□□□□ -0.23
SCN4B-202ENST00000415030 ZNF75DP51815 510 aa13.61□□□□□ -0.23
SCN4B-202ENST00000415030 NECAB1Q8N987 351 aa13.61□□□□□ -0.23
SCN4B-202ENST00000415030 ATP10DQ9P241 1426 aa13.61□□□□□ -0.23
SCN4B-202ENST00000415030 PYCARDQ9ULZ3 195 aa13.61□□□□□ -0.23
SCN4B-202ENST00000415030 MTMR6Q9Y217 621 aa13.61□□□□□ -0.23
SCN4B-202ENST00000415030 TPM1P09493 284 aa13.6□□□□□ -0.23
SCN4B-202ENST00000415030 CREBRFQ8IUR6 639 aa13.6□□□□□ -0.23
SCN4B-202ENST00000415030 BCL11BQ9C0K0 894 aaPredicted RBP13.6□□□□□ -0.23
SCN4B-202ENST00000415030 RBM8AQ9Y5S9 174 aaKnown RBP13.6□□□□□ -0.23
SCN4B-202ENST00000415030 SKILP12757 684 aa13.6□□□□□ -0.23
SCN4B-202ENST00000415030 ME1P48163 572 aa13.6□□□□□ -0.23
SCN4B-202ENST00000415030 MTHFSDQ2M296 383 aaKnown RBP13.6□□□□□ -0.23
SCN4B-202ENST00000415030 ABCC3O15438 1527 aa13.6□□□□□ -0.23
SCN4B-202ENST00000415030 CEBPZQ03701 1054 aaKnown RBP13.6□□□□□ -0.23
SCN4B-202ENST00000415030 CCDC34Q96HJ3 373 aa13.6□□□□□ -0.23
SCN4B-202ENST00000415030 CLSTN2Q9H4D0 955 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms