RNA–Protein interactions for RNA: ENST00000414008.3

HCG27-202, Transcript of HLA complex group 27, humanhuman

TSL 4

Gene HCG27, Length 829 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG27-202ENST00000414008 CAMTA1Q9Y6Y1 1673 aa13.14□□□□□ -0.31
HCG27-202ENST00000414008 SPATA31A5Q5VU36 1347 aa13.13□□□□□ -0.31
HCG27-202ENST00000414008 SPATA31A7Q8IWB4 1347 aa13.13□□□□□ -0.31
HCG27-202ENST00000414008 CDK12Q9NYV4 1490 aaPredicted RBP13.13□□□□□ -0.31
HCG27-202ENST00000414008 MS4A1P11836 297 aa13.13□□□□□ -0.31
HCG27-202ENST00000414008 LARP1Q6PKG0 1096 aaKnown RBP13.13□□□□□ -0.31
HCG27-202ENST00000414008 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.13□□□□□ -0.31
HCG27-202ENST00000414008 MAP3K19Q56UN5 1328 aa13.13□□□□□ -0.31
HCG27-202ENST00000414008 AMPHP49418 695 aa13.12□□□□□ -0.31
HCG27-202ENST00000414008 DIXDC1Q155Q3 683 aa13.12□□□□□ -0.31
HCG27-202ENST00000414008 NKX2-3Q8TAU0 364 aa13.12□□□□□ -0.31
HCG27-202ENST00000414008 IP6K1Q92551 441 aa13.12□□□□□ -0.31
HCG27-202ENST00000414008 SLC27A5Q9Y2P5 690 aa13.12□□□□□ -0.31
HCG27-202ENST00000414008 SPATA31A1Q5TZJ5 1347 aa13.12□□□□□ -0.31
HCG27-202ENST00000414008 PER1O15534 1290 aaPredicted RBP13.11□□□□□ -0.31
HCG27-202ENST00000414008 HOXA2O43364 376 aa13.11□□□□□ -0.31
HCG27-202ENST00000414008 CSB-PGBD3P0DP91 1061 aa13.11□□□□□ -0.31
HCG27-202ENST00000414008 GGCXP38435 758 aa13.11□□□□□ -0.31
HCG27-202ENST00000414008 RRS1Q15050 365 aaKnown RBP13.11□□□□□ -0.31
HCG27-202ENST00000414008 TOM1L2Q6ZVM7 507 aa13.11□□□□□ -0.31
HCG27-202ENST00000414008 USP35Q9P2H5 1018 aa13.11□□□□□ -0.31
HCG27-202ENST00000414008 LMO7Q8WWI1 1683 aa13.11□□□□□ -0.31
HCG27-202ENST00000414008 NRAPQ86VF7 1730 aa13.1□□□□□ -0.31
HCG27-202ENST00000414008 COL5A2P05997 1499 aaPredicted RBP13.1□□□□□ -0.31
HCG27-202ENST00000414008 NSD2O96028 1365 aa13.1□□□□□ -0.31
HCG27-202ENST00000414008 TLL1O43897 1013 aa13.1□□□□□ -0.31
HCG27-202ENST00000414008 RGS12O14924 1447 aa13.1□□□□□ -0.31
HCG27-202ENST00000414008 WDR17Q8IZU2 1322 aa13.1□□□□□ -0.31
HCG27-202ENST00000414008 FMNL1O95466 1100 aaPredicted RBP13.09□□□□□ -0.31
HCG27-202ENST00000414008 GLI3P10071 1580 aa13.09□□□□□ -0.31
HCG27-202ENST00000414008 HOXC9P31274 260 aa13.09□□□□□ -0.31
HCG27-202ENST00000414008 MYT1Q01538 1121 aa13.09□□□□□ -0.31
HCG27-202ENST00000414008 Q3C1V9 767 aa13.09□□□□□ -0.31
HCG27-202ENST00000414008 MORC1Q86VD1 984 aa13.09□□□□□ -0.31
HCG27-202ENST00000414008 SEPT12Q8IYM1 358 aa13.09□□□□□ -0.31
HCG27-202ENST00000414008 TCP11L2Q8N4U5 519 aa13.09□□□□□ -0.31
HCG27-202ENST00000414008 SPIRE2Q8WWL2 714 aa13.09□□□□□ -0.31
HCG27-202ENST00000414008 SPSB2Q99619 263 aa13.09□□□□□ -0.31
HCG27-202ENST00000414008 THRAP3Q9Y2W1 955 aaKnown RBP13.09□□□□□ -0.31
HCG27-202ENST00000414008 SALL2Q9Y467 1007 aaPredicted RBP13.09□□□□□ -0.31
HCG27-202ENST00000414008 COL18A1P39060 1754 aa13.09□□□□□ -0.31
HCG27-202ENST00000414008 KIF20BQ96Q89 1820 aa13.09□□□□□ -0.31
HCG27-202ENST00000414008 CRB1P82279 1406 aa13.08□□□□□ -0.32
HCG27-202ENST00000414008 SOCS7O14512 581 aa13.08□□□□□ -0.32
HCG27-202ENST00000414008 ADH1BP00325 375 aa13.08□□□□□ -0.32
HCG27-202ENST00000414008 TNNT2P45379 298 aaPredicted RBP13.08□□□□□ -0.32
HCG27-202ENST00000414008 ANKRD24Q8TF21 1146 aa13.08□□□□□ -0.32
HCG27-202ENST00000414008 CARD10Q9BWT7 1032 aa13.08□□□□□ -0.32
HCG27-202ENST00000414008 ABCC6O95255 1503 aa13.08□□□□□ -0.32
HCG27-202ENST00000414008 BLMP54132 1417 aaPredicted RBP13.07□□□□□ -0.32
HCG27-202ENST00000414008 PPM1GO15355 546 aaPredicted RBP13.07□□□□□ -0.32
HCG27-202ENST00000414008 PPP1R18Q6NYC8 613 aa13.07□□□□□ -0.32
HCG27-202ENST00000414008 LTV1Q96GA3 475 aaPredicted RBP13.07□□□□□ -0.32
HCG27-202ENST00000414008 CC2D1BQ5T0F9 858 aaKnown RBP13.06□□□□□ -0.32
HCG27-202ENST00000414008 KDM4CQ9H3R0 1056 aa13.06□□□□□ -0.32
HCG27-202ENST00000414008 NLRP2Q9NX02 1062 aa13.06□□□□□ -0.32
HCG27-202ENST00000414008 POLKQ9UBT6 870 aa13.06□□□□□ -0.32
HCG27-202ENST00000414008 EMILIN1Q9Y6C2 1016 aa13.06□□□□□ -0.32
HCG27-202ENST00000414008 RTL1A6NKG5 1358 aa13.06□□□□□ -0.32
HCG27-202ENST00000414008 KIF24Q5T7B8 1368 aa13.06□□□□□ -0.32
HCG27-202ENST00000414008 HSP90AB2PQ58FF8 381 aa13.05□□□□□ -0.32
HCG27-202ENST00000414008 GPBP1L1Q9HC44 474 aaPredicted RBP13.05□□□□□ -0.32
HCG27-202ENST00000414008 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.05□□□□□ -0.32
HCG27-202ENST00000414008 FLT4P35916 1363 aa13.05□□□□□ -0.32
HCG27-202ENST00000414008 NPC1L1Q9UHC9 1359 aa13.05□□□□□ -0.32
HCG27-202ENST00000414008 LTN1O94822 1766 aa13.04□□□□□ -0.32
HCG27-202ENST00000414008 CNGB1Q14028 1251 aaPredicted RBP13.04□□□□□ -0.32
HCG27-202ENST00000414008 TBC1D2Q9BYX2 928 aa13.04□□□□□ -0.32
HCG27-202ENST00000414008 SLC6A16Q9GZN6 736 aa13.04□□□□□ -0.32
HCG27-202ENST00000414008 INSRP06213 1382 aa13.04□□□□□ -0.32
HCG27-202ENST00000414008 RGS20O76081 388 aa13.03□□□□□ -0.32
HCG27-202ENST00000414008 BRICD5Q6PL45 260 aa13.03□□□□□ -0.32
HCG27-202ENST00000414008 KRT27Q7Z3Y8 459 aa13.03□□□□□ -0.32
HCG27-202ENST00000414008 HLA-CQ95604 372 aa13.03□□□□□ -0.32
HCG27-202ENST00000414008 THAP11Q96EK4 314 aa13.03□□□□□ -0.32
HCG27-202ENST00000414008 CDCA7Q9BWT1 371 aaPredicted RBP13.03□□□□□ -0.32
HCG27-202ENST00000414008 RGPD5Q99666 1765 aa13.02□□□□□ -0.32
HCG27-202ENST00000414008 FDX1P10109 184 aa13.02□□□□□ -0.33
HCG27-202ENST00000414008 DDX10Q13206 875 aaKnown RBP13.02□□□□□ -0.33
HCG27-202ENST00000414008 NEUROD2Q15784 382 aa13.02□□□□□ -0.33
HCG27-202ENST00000414008 MOXD2PA6NHM9 499 aa13.01□□□□□ -0.33
HCG27-202ENST00000414008 GUCA2AQ02747 115 aa13.01□□□□□ -0.33
HCG27-202ENST00000414008 PDE3BQ13370 1112 aa13.01□□□□□ -0.33
HCG27-202ENST00000414008 RNF19BQ6ZMZ0 732 aa13.01□□□□□ -0.33
HCG27-202ENST00000414008 SMG6Q86US8 1419 aaKnown RBP13.01□□□□□ -0.33
HCG27-202ENST00000414008 ANKRD26Q9UPS8 1709 aa13□□□□□ -0.33
HCG27-202ENST00000414008 S1PR4O95977 384 aa13□□□□□ -0.33
HCG27-202ENST00000414008 NBPF6Q5VWK0 638 aa13□□□□□ -0.33
HCG27-202ENST00000414008 DDRGK1Q96HY6 314 aa13□□□□□ -0.33
HCG27-202ENST00000414008 NBPF4Q96M43 638 aa13□□□□□ -0.33
HCG27-202ENST00000414008 IL2RBP14784 551 aa12.99□□□□□ -0.33
HCG27-202ENST00000414008 NDUFV2P19404 249 aa12.99□□□□□ -0.33
HCG27-202ENST00000414008 MTHFSP49914 203 aa12.99□□□□□ -0.33
HCG27-202ENST00000414008 DDB1Q16531 1140 aa12.99□□□□□ -0.33
HCG27-202ENST00000414008 RSPH6AQ9H0K4 717 aa12.99□□□□□ -0.33
HCG27-202ENST00000414008 PEAK1Q9H792 1746 aa12.99□□□□□ -0.33
HCG27-202ENST00000414008 EXOC5O00471 708 aa12.98□□□□□ -0.33
HCG27-202ENST00000414008 GJA5P36382 358 aa12.98□□□□□ -0.33
HCG27-202ENST00000414008 USB1Q9BQ65 265 aaKnown RBP12.98□□□□□ -0.33
HCG27-202ENST00000414008 THSD7AQ9UPZ6 1657 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms