RNA–Protein interactions for RNA: ENST00000413758.1

COL6A2-205, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 750 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-205ENST00000413758 TMPOP42166 694 aaKnown RBP22.09■■□□□ 1.13
COL6A2-205ENST00000413758 NIP7Q9Y221 180 aaKnown RBP eCLIP22.09■■□□□ 1.13
COL6A2-205ENST00000413758 LAMB4A4D0S4 1761 aa22.08■■□□□ 1.13
COL6A2-205ENST00000413758 DLEC1Q9Y238 1755 aa22.08■■□□□ 1.13
COL6A2-205ENST00000413758 FAM177BA6PVY3 158 aa22.08■■□□□ 1.13
COL6A2-205ENST00000413758 RASSF7Q02833 373 aa22.08■■□□□ 1.13
COL6A2-205ENST00000413758 MYL6BP14649 208 aa22.07■■□□□ 1.12
COL6A2-205ENST00000413758 ANKRD31Q8N7Z5 1873 aa22.07■■□□□ 1.12
COL6A2-205ENST00000413758 KIF6Q6ZMV9 814 aa22.06■■□□□ 1.12
COL6A2-205ENST00000413758 KIF3CO14782 793 aa22.05■■□□□ 1.12
COL6A2-205ENST00000413758 GTF2E1P29083 439 aaPredicted RBP22.05■■□□□ 1.12
COL6A2-205ENST00000413758 TPTE2Q6XPS3 522 aa22.05■■□□□ 1.12
COL6A2-205ENST00000413758 RUNDC1Q96C34 613 aa22.05■■□□□ 1.12
COL6A2-205ENST00000413758 C21orf2O43822 256 aa22.04■■□□□ 1.12
COL6A2-205ENST00000413758 HLFQ16534 295 aa22.04■■□□□ 1.12
COL6A2-205ENST00000413758 NMRK2Q9NPI5 230 aa22.04■■□□□ 1.12
COL6A2-205ENST00000413758 EIF2S2P20042 333 aaKnown RBP22.03■■□□□ 1.12
COL6A2-205ENST00000413758 LMNB1P20700 586 aa22.03■■□□□ 1.12
COL6A2-205ENST00000413758 CNKSR1Q969H4 720 aa22.03■■□□□ 1.12
COL6A2-205ENST00000413758 PRKRIP1Q9H875 184 aaPredicted RBP22.03■■□□□ 1.12
COL6A2-205ENST00000413758 LAS1LQ9Y4W2 734 aaKnown RBP22.03■■□□□ 1.12
COL6A2-205ENST00000413758 KDM2BQ8NHM5 1336 aa22.03■■□□□ 1.12
COL6A2-205ENST00000413758 RGL2O15211 777 aa22.02■■□□□ 1.12
COL6A2-205ENST00000413758 STYK1Q6J9G0 422 aa22.02■■□□□ 1.12
COL6A2-205ENST00000413758 C16orf71Q8IYS4 520 aaPredicted RBP22.02■■□□□ 1.12
COL6A2-205ENST00000413758 MASTLQ96GX5 879 aa22.02■■□□□ 1.12
COL6A2-205ENST00000413758 ADAMTS8Q9UP79 889 aa22.02■■□□□ 1.12
COL6A2-205ENST00000413758 COL11A2P13942 1736 aaPredicted RBP22.01■■□□□ 1.11
COL6A2-205ENST00000413758 TTLL7Q6ZT98 887 aa22.01■■□□□ 1.11
COL6A2-205ENST00000413758 ZBTB3Q9H5J0 574 aa22.01■■□□□ 1.11
COL6A2-205ENST00000413758 MAP3K15Q6ZN16 1313 aa22.01■■□□□ 1.11
COL6A2-205ENST00000413758 SBF1O95248 1867 aa22■■□□□ 1.11
COL6A2-205ENST00000413758 ERVV-1B6SEH8 477 aa22■■□□□ 1.11
COL6A2-205ENST00000413758 SRGNP10124 158 aa22■■□□□ 1.11
COL6A2-205ENST00000413758 BABAM1Q9NWV8 329 aa22■■□□□ 1.11
COL6A2-205ENST00000413758 ZEB1P37275 1124 aaPredicted RBP21.99■■□□□ 1.11
COL6A2-205ENST00000413758 PRPF40BQ6NWY9 871 aaKnown RBP21.99■■□□□ 1.11
COL6A2-205ENST00000413758 ERBB4Q15303 1308 aa21.99■■□□□ 1.11
COL6A2-205ENST00000413758 NFKBIEO00221 500 aa21.98■■□□□ 1.11
COL6A2-205ENST00000413758 TOMM70O94826 608 aa21.98■■□□□ 1.11
COL6A2-205ENST00000413758 GPTP24298 496 aa21.98■■□□□ 1.11
COL6A2-205ENST00000413758 NECTIN2Q92692 538 aa21.98■■□□□ 1.11
COL6A2-205ENST00000413758 NYXQ9GZU5 481 aa21.98■■□□□ 1.11
COL6A2-205ENST00000413758 CACNA1SQ13698 1873 aa21.97■■□□□ 1.11
COL6A2-205ENST00000413758 NPR1P16066 1061 aa21.97■■□□□ 1.11
COL6A2-205ENST00000413758 HSPA6P17066 643 aa21.97■■□□□ 1.11
COL6A2-205ENST00000413758 RRAGCQ9HB90 399 aa21.97■■□□□ 1.11
COL6A2-205ENST00000413758 SOGA3Q5TF21 947 aa21.96■■□□□ 1.11
COL6A2-205ENST00000413758 ANXA1P04083 346 aa21.95■■□□□ 1.1
COL6A2-205ENST00000413758 PRELPP51888 382 aa21.95■■□□□ 1.1
COL6A2-205ENST00000413758 NUTM1Q86Y26 1132 aa21.95■■□□□ 1.1
COL6A2-205ENST00000413758 TAOK3Q9H2K8 898 aa21.95■■□□□ 1.1
COL6A2-205ENST00000413758 TRIM35Q9UPQ4 493 aa21.95■■□□□ 1.1
COL6A2-205ENST00000413758 ZC3H4Q9UPT8 1303 aaKnown RBP21.95■■□□□ 1.1
COL6A2-205ENST00000413758 NUP98P52948 1817 aa21.94■■□□□ 1.1
COL6A2-205ENST00000413758 SLX4Q8IY92 1834 aa21.94■■□□□ 1.1
COL6A2-205ENST00000413758 CCDC88AQ3V6T2 1871 aa21.94■■□□□ 1.1
COL6A2-205ENST00000413758 CHL1O00533 1208 aa21.93■■□□□ 1.1
COL6A2-205ENST00000413758 ERFEQ4G0M1 354 aa21.93■■□□□ 1.1
COL6A2-205ENST00000413758 AIMP1Q12904 312 aaKnown RBP21.92■■□□□ 1.1
COL6A2-205ENST00000413758 PROSER3Q2NL68 480 aa21.92■■□□□ 1.1
COL6A2-205ENST00000413758 GIGYF2Q6Y7W6 1299 aaKnown RBP21.92■■□□□ 1.1
COL6A2-205ENST00000413758 GLTPD2A6NH11 291 aa21.91■■□□□ 1.1
COL6A2-205ENST00000413758 PDIA6Q15084 440 aa21.91■■□□□ 1.1
COL6A2-205ENST00000413758 KRT24Q2M2I5 525 aa21.91■■□□□ 1.1
COL6A2-205ENST00000413758 CCDC93Q567U6 631 aa21.91■■□□□ 1.1
COL6A2-205ENST00000413758 DPY19L2Q6NUT2 758 aa21.91■■□□□ 1.1
COL6A2-205ENST00000413758 TIAM2Q8IVF5 1701 aa21.91■■□□□ 1.1
COL6A2-205ENST00000413758 UBN2Q6ZU65 1347 aa21.9■■□□□ 1.1
COL6A2-205ENST00000413758 KLRG2A4D1S0 409 aaPredicted RBP21.9■■□□□ 1.1
COL6A2-205ENST00000413758 ALDH1B1P30837 517 aa21.9■■□□□ 1.1
COL6A2-205ENST00000413758 SUSD4Q5VX71 490 aa21.9■■□□□ 1.1
COL6A2-205ENST00000413758 PPP1R42Q7Z4L9 355 aa21.9■■□□□ 1.1
COL6A2-205ENST00000413758 RBM46Q8TBY0 533 aaKnown RBP21.9■■□□□ 1.1
COL6A2-205ENST00000413758 RPGRQ92834 1020 aaKnown RBP21.9■■□□□ 1.1
COL6A2-205ENST00000413758 FER1L6Q2WGJ9 1857 aa21.9■■□□□ 1.1
COL6A2-205ENST00000413758 ABCC12Q96J65 1359 aa21.89■■□□□ 1.1
COL6A2-205ENST00000413758 TNRC6CQ9HCJ0 1690 aaKnown RBP21.89■■□□□ 1.1
COL6A2-205ENST00000413758 LTBP3Q9NS15 1303 aa21.89■■□□□ 1.1
COL6A2-205ENST00000413758 APAF1O14727 1248 aa21.89■■□□□ 1.09
COL6A2-205ENST00000413758 COPS6Q7L5N1 327 aa21.89■■□□□ 1.09
COL6A2-205ENST00000413758 ZNF34Q8IZ26 560 aa21.89■■□□□ 1.09
COL6A2-205ENST00000413758 XAGE3Q8WTP9 111 aa21.89■■□□□ 1.09
COL6A2-205ENST00000413758 ARFGEF2Q9Y6D5 1785 aa21.89■■□□□ 1.09
COL6A2-205ENST00000413758 PARP10Q53GL7 1025 aa21.88■■□□□ 1.09
COL6A2-205ENST00000413758 HDGFL1Q5TGJ6 251 aa21.88■■□□□ 1.09
COL6A2-205ENST00000413758 VEGFAP15692 232 aaPredicted RBP21.87■■□□□ 1.09
COL6A2-205ENST00000413758 CFAP44Q96MT7 982 aa21.87■■□□□ 1.09
COL6A2-205ENST00000413758 DDX21Q9NR30 783 aaKnown RBP eCLIP21.87■■□□□ 1.09
COL6A2-205ENST00000413758 IBTKQ9P2D0 1353 aaPredicted RBP21.87■■□□□ 1.09
COL6A2-205ENST00000413758 APLP1P51693 650 aa21.86■■□□□ 1.09
COL6A2-205ENST00000413758 OLFM4Q6UX06 510 aa21.86■■□□□ 1.09
COL6A2-205ENST00000413758 LRP10Q7Z4F1 713 aa21.86■■□□□ 1.09
COL6A2-205ENST00000413758 C7orf43Q8WVR3 580 aa21.86■■□□□ 1.09
COL6A2-205ENST00000413758 UTP14AQ9BVJ6 771 aaKnown RBP21.86■■□□□ 1.09
COL6A2-205ENST00000413758 CHPF2Q9P2E5 772 aa21.86■■□□□ 1.09
COL6A2-205ENST00000413758 NTSR2O95665 410 aa21.85■■□□□ 1.09
COL6A2-205ENST00000413758 CALD1Q05682 793 aaKnown RBP21.85■■□□□ 1.09
COL6A2-205ENST00000413758 HSP90AB3PQ58FF7 597 aa21.85■■□□□ 1.09
COL6A2-205ENST00000413758 RTKN2Q8IZC4 609 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms