RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 TTLL7Q6ZT98 887 aa19.32■□□□□ 0.68
LIMS4-201ENST00000413601 CCDC24Q8N4L8 307 aa19.32■□□□□ 0.68
LIMS4-201ENST00000413601 NECTIN2Q92692 538 aa19.32■□□□□ 0.68
LIMS4-201ENST00000413601 PIM2Q9P1W9 311 aa19.32■□□□□ 0.68
LIMS4-201ENST00000413601 CACNA1SQ13698 1873 aa19.32■□□□□ 0.68
LIMS4-201ENST00000413601 ERBB4Q15303 1308 aa19.31■□□□□ 0.68
LIMS4-201ENST00000413601 ZNF853P0CG23 659 aa19.31■□□□□ 0.68
LIMS4-201ENST00000413601 PRR5LQ6MZQ0 368 aa19.31■□□□□ 0.68
LIMS4-201ENST00000413601 MBIPQ9NS73 344 aa19.31■□□□□ 0.68
LIMS4-201ENST00000413601 COL11A2P13942 1736 aaPredicted RBP19.31■□□□□ 0.68
LIMS4-201ENST00000413601 ANXA1P04083 346 aa19.3■□□□□ 0.68
LIMS4-201ENST00000413601 CALD1Q05682 793 aaKnown RBP19.3■□□□□ 0.68
LIMS4-201ENST00000413601 PDIA6Q15084 440 aa19.3■□□□□ 0.68
LIMS4-201ENST00000413601 PROSER3Q2NL68 480 aa19.3■□□□□ 0.68
LIMS4-201ENST00000413601 MAP3K15Q6ZN16 1313 aa19.29■□□□□ 0.68
LIMS4-201ENST00000413601 RGL2O15211 777 aa19.29■□□□□ 0.68
LIMS4-201ENST00000413601 NPHP1O15259 732 aa19.29■□□□□ 0.68
LIMS4-201ENST00000413601 GNAI1P63096 354 aa19.29■□□□□ 0.68
LIMS4-201ENST00000413601 KIF6Q6ZMV9 814 aa19.29■□□□□ 0.68
LIMS4-201ENST00000413601 CNBD1Q8NA66 436 aa19.29■□□□□ 0.68
LIMS4-201ENST00000413601 IFT57Q9NWB7 429 aa19.29■□□□□ 0.68
LIMS4-201ENST00000413601 NIP7Q9Y221 180 aaKnown RBP eCLIP19.29■□□□□ 0.68
LIMS4-201ENST00000413601 ERVV-1B6SEH8 477 aa19.28■□□□□ 0.68
LIMS4-201ENST00000413601 DALRD3Q5D0E6 543 aaKnown RBP19.28■□□□□ 0.68
LIMS4-201ENST00000413601 LRP10Q7Z4F1 713 aa19.28■□□□□ 0.68
LIMS4-201ENST00000413601 NBPF5PQ86XG9 351 aaPredicted RBP19.28■□□□□ 0.68
LIMS4-201ENST00000413601 C2CD5Q86YS7 1000 aa19.28■□□□□ 0.68
LIMS4-201ENST00000413601 ZBTB3Q9H5J0 574 aa19.28■□□□□ 0.68
LIMS4-201ENST00000413601 ANKRD36CQ5JPF3 1778 aa19.28■□□□□ 0.68
LIMS4-201ENST00000413601 ZNF784Q8NCA9 323 aaPredicted RBP19.27■□□□□ 0.68
LIMS4-201ENST00000413601 BRIP1Q9BX63 1249 aa19.27■□□□□ 0.68
LIMS4-201ENST00000413601 FAM177BA6PVY3 158 aa19.26■□□□□ 0.67
LIMS4-201ENST00000413601 H0YIN7 160 aa19.26■□□□□ 0.67
LIMS4-201ENST00000413601 ST5P78524 1137 aa19.26■□□□□ 0.67
LIMS4-201ENST00000413601 DUSP27Q5VZP5 1158 aa19.26■□□□□ 0.67
LIMS4-201ENST00000413601 ARHGAP27Q6ZUM4 889 aa19.26■□□□□ 0.67
LIMS4-201ENST00000413601 FAM9BQ8IZU0 186 aa19.26■□□□□ 0.67
LIMS4-201ENST00000413601 SBF1O95248 1867 aa19.25■□□□□ 0.67
LIMS4-201ENST00000413601 HOXB7P09629 217 aa19.25■□□□□ 0.67
LIMS4-201ENST00000413601 PDE6BP35913 854 aa19.25■□□□□ 0.67
LIMS4-201ENST00000413601 CCDC27Q2M243 656 aa19.25■□□□□ 0.67
LIMS4-201ENST00000413601 HDGFL1Q5TGJ6 251 aa19.25■□□□□ 0.67
LIMS4-201ENST00000413601 WWC1Q8IX03 1113 aa19.25■□□□□ 0.67
LIMS4-201ENST00000413601 DDX21Q9NR30 783 aaKnown RBP eCLIP19.25■□□□□ 0.67
LIMS4-201ENST00000413601 CHPF2Q9P2E5 772 aa19.25■□□□□ 0.67
LIMS4-201ENST00000413601 CCDC88AQ3V6T2 1871 aa19.24■□□□□ 0.67
LIMS4-201ENST00000413601 AIMP1Q12904 312 aaKnown RBP19.24■□□□□ 0.67
LIMS4-201ENST00000413601 TPTE2Q6XPS3 522 aa19.24■□□□□ 0.67
LIMS4-201ENST00000413601 ATP10DQ9P241 1426 aa19.24■□□□□ 0.67
LIMS4-201ENST00000413601 ELL2O00472 640 aaPredicted RBP19.23■□□□□ 0.67
LIMS4-201ENST00000413601 GPTP24298 496 aa19.23■□□□□ 0.67
LIMS4-201ENST00000413601 GIGYF2Q6Y7W6 1299 aaKnown RBP19.23■□□□□ 0.67
LIMS4-201ENST00000413601 COPS6Q7L5N1 327 aa19.23■□□□□ 0.67
LIMS4-201ENST00000413601 TTLL6Q8N841 843 aa19.23■□□□□ 0.67
LIMS4-201ENST00000413601 XAGE3Q8WTP9 111 aa19.23■□□□□ 0.67
LIMS4-201ENST00000413601 ZNF622Q969S3 477 aaKnown RBP eCLIP19.23■□□□□ 0.67
LIMS4-201ENST00000413601 SALL2Q9Y467 1007 aaPredicted RBP19.23■□□□□ 0.67
LIMS4-201ENST00000413601 ARFGEF2Q9Y6D5 1785 aa19.23■□□□□ 0.67
LIMS4-201ENST00000413601 SLX4Q8IY92 1834 aa19.23■□□□□ 0.67
LIMS4-201ENST00000413601 C8orf58Q8NAV2 365 aa19.22■□□□□ 0.67
LIMS4-201ENST00000413601 PDZRN3Q9UPQ7 1066 aa19.22■□□□□ 0.67
LIMS4-201ENST00000413601 TNRC6CQ9HCJ0 1690 aaKnown RBP19.21■□□□□ 0.67
LIMS4-201ENST00000413601 ZNF34Q8IZ26 560 aa19.21■□□□□ 0.67
LIMS4-201ENST00000413601 TSR2Q969E8 191 aaKnown RBP19.21■□□□□ 0.67
LIMS4-201ENST00000413601 UBN2Q6ZU65 1347 aa19.21■□□□□ 0.67
LIMS4-201ENST00000413601 GTF2E1P29083 439 aaPredicted RBP19.2■□□□□ 0.66
LIMS4-201ENST00000413601 NCBP3Q53F19 620 aaKnown RBP19.2■□□□□ 0.66
LIMS4-201ENST00000413601 DBF4Q9UBU7 674 aaPredicted RBP19.2■□□□□ 0.66
LIMS4-201ENST00000413601 SRGNP10124 158 aa19.19■□□□□ 0.66
LIMS4-201ENST00000413601 SUSD4Q5VX71 490 aa19.19■□□□□ 0.66
LIMS4-201ENST00000413601 NUTM1Q86Y26 1132 aa19.19■□□□□ 0.66
LIMS4-201ENST00000413601 NYXQ9GZU5 481 aa19.19■□□□□ 0.66
LIMS4-201ENST00000413601 ERFEQ4G0M1 354 aa19.18■□□□□ 0.66
LIMS4-201ENST00000413601 TSPYL6Q8N831 410 aa19.18■□□□□ 0.66
LIMS4-201ENST00000413601 IL16Q14005 1332 aa19.18■□□□□ 0.66
LIMS4-201ENST00000413601 ADCY9O60503 1353 aa19.18■□□□□ 0.66
LIMS4-201ENST00000413601 FER1L6Q2WGJ9 1857 aa19.18■□□□□ 0.66
LIMS4-201ENST00000413601 STYK1Q6J9G0 422 aa19.17■□□□□ 0.66
LIMS4-201ENST00000413601 MASTLQ96GX5 879 aa19.17■□□□□ 0.66
LIMS4-201ENST00000413601 HYPKQ9NX55 129 aa19.17■□□□□ 0.66
LIMS4-201ENST00000413601 ABCC12Q96J65 1359 aa19.17■□□□□ 0.66
LIMS4-201ENST00000413601 ZNF219Q9P2Y4 722 aaPredicted RBP19.16■□□□□ 0.66
LIMS4-201ENST00000413601 IBTKQ9P2D0 1353 aaPredicted RBP19.16■□□□□ 0.66
LIMS4-201ENST00000413601 LAMB2P55268 1798 aa19.16■□□□□ 0.66
LIMS4-201ENST00000413601 KLRG2A4D1S0 409 aaPredicted RBP19.15■□□□□ 0.66
LIMS4-201ENST00000413601 NTSR2O95665 410 aa19.15■□□□□ 0.66
LIMS4-201ENST00000413601 PARP10Q53GL7 1025 aa19.15■□□□□ 0.66
LIMS4-201ENST00000413601 ANKRD13DQ6ZTN6 518 aa19.15■□□□□ 0.66
LIMS4-201ENST00000413601 PPP1R42Q7Z4L9 355 aa19.15■□□□□ 0.66
LIMS4-201ENST00000413601 PLBD2Q8NHP8 589 aa19.15■□□□□ 0.66
LIMS4-201ENST00000413601 CNKSR1Q969H4 720 aa19.15■□□□□ 0.66
LIMS4-201ENST00000413601 C21orf2O43822 256 aa19.14■□□□□ 0.65
LIMS4-201ENST00000413601 NPR1P16066 1061 aa19.14■□□□□ 0.65
LIMS4-201ENST00000413601 TCIRG1Q13488 830 aa19.14■□□□□ 0.65
LIMS4-201ENST00000413601 HSP90AB3PQ58FF7 597 aa19.14■□□□□ 0.65
LIMS4-201ENST00000413601 C9orf131Q5VYM1 1079 aa19.14■□□□□ 0.65
LIMS4-201ENST00000413601 WDR63Q8IWG1 891 aa19.14■□□□□ 0.65
LIMS4-201ENST00000413601 PHAXQ9H814 394 aaKnown RBP19.14■□□□□ 0.65
LIMS4-201ENST00000413601 DICER1Q9UPY3 1922 aaKnown RBP19.13■□□□□ 0.65
LIMS4-201ENST00000413601 CACNA1FO60840 1977 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms