RNA–Protein interactions for RNA: ENST00000413233.1

TPM3P1-201, Transcript of tropomyosin 3 pseudogene 1, humanhuman

BASIC

Gene TPM3P1, Length 747 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P1-201ENST00000413233 RPS6KA4O75676 772 aa12.33□□□□□ -0.44
TPM3P1-201ENST00000413233 DDX58O95786 925 aaKnown RBP12.33□□□□□ -0.44
TPM3P1-201ENST00000413233 PDIA6Q15084 440 aa12.33□□□□□ -0.44
TPM3P1-201ENST00000413233 NPM2Q86SE8 214 aaKnown RBP12.33□□□□□ -0.44
TPM3P1-201ENST00000413233 GPBP1L1Q9HC44 474 aaPredicted RBP12.33□□□□□ -0.44
TPM3P1-201ENST00000413233 TJP1Q07157 1748 aa12.33□□□□□ -0.44
TPM3P1-201ENST00000413233 RNF123Q5XPI4 1314 aa12.33□□□□□ -0.44
TPM3P1-201ENST00000413233 COL5A3P25940 1745 aaPredicted RBP12.32□□□□□ -0.44
TPM3P1-201ENST00000413233 ERVV-1B6SEH8 477 aa12.32□□□□□ -0.44
TPM3P1-201ENST00000413233 ELL2O00472 640 aaPredicted RBP12.32□□□□□ -0.44
TPM3P1-201ENST00000413233 SSFA2P28290 1259 aa12.32□□□□□ -0.44
TPM3P1-201ENST00000413233 CRKLP46109 303 aaKnown RBP12.32□□□□□ -0.44
TPM3P1-201ENST00000413233 EIF5P55010 431 aaKnown RBP12.32□□□□□ -0.44
TPM3P1-201ENST00000413233 ITPK1Q13572 414 aa12.32□□□□□ -0.44
TPM3P1-201ENST00000413233 KRT24Q2M2I5 525 aa12.32□□□□□ -0.44
TPM3P1-201ENST00000413233 LRP10Q7Z4F1 713 aa12.32□□□□□ -0.44
TPM3P1-201ENST00000413233 MRPL50Q8N5N7 158 aaKnown RBP12.32□□□□□ -0.44
TPM3P1-201ENST00000413233 SSH1Q8WYL5 1049 aa12.32□□□□□ -0.44
TPM3P1-201ENST00000413233 API5Q9BZZ5 524 aaKnown RBP12.32□□□□□ -0.44
TPM3P1-201ENST00000413233 SMC4Q9NTJ3 1288 aa12.32□□□□□ -0.44
TPM3P1-201ENST00000413233 EIF2S2P20042 333 aaKnown RBP12.31□□□□□ -0.44
TPM3P1-201ENST00000413233 INTS5Q6P9B9 1019 aaKnown RBP12.31□□□□□ -0.44
TPM3P1-201ENST00000413233 ZNF526Q8TF50 670 aaPredicted RBP12.31□□□□□ -0.44
TPM3P1-201ENST00000413233 TFCP2L1Q9NZI6 479 aa12.31□□□□□ -0.44
TPM3P1-201ENST00000413233 RTCBQ9Y3I0 505 aaKnown RBP12.31□□□□□ -0.44
TPM3P1-201ENST00000413233 ADCY9O60503 1353 aa12.3□□□□□ -0.44
TPM3P1-201ENST00000413233 FLIIQ13045 1269 aa12.3□□□□□ -0.44
TPM3P1-201ENST00000413233 PDE3AQ14432 1141 aa12.3□□□□□ -0.44
TPM3P1-201ENST00000413233 CLEC4GQ6UXB4 293 aa12.3□□□□□ -0.44
TPM3P1-201ENST00000413233 LINC00116Q8NCU8 138 aa12.3□□□□□ -0.44
TPM3P1-201ENST00000413233 CHMP4BQ9H444 224 aaKnown RBP12.3□□□□□ -0.44
TPM3P1-201ENST00000413233 CHPF2Q9P2E5 772 aa12.3□□□□□ -0.44
TPM3P1-201ENST00000413233 PRAMEF22A3QJZ6 481 aa12.29□□□□□ -0.44
TPM3P1-201ENST00000413233 NBPF26B4DH59 902 aa12.29□□□□□ -0.44
TPM3P1-201ENST00000413233 A1BGP04217 495 aa12.29□□□□□ -0.44
TPM3P1-201ENST00000413233 KCNQ4P56696 695 aa12.29□□□□□ -0.44
TPM3P1-201ENST00000413233 AAMPQ13685 434 aa12.29□□□□□ -0.44
TPM3P1-201ENST00000413233 HSP90AB3PQ58FF7 597 aa12.29□□□□□ -0.44
TPM3P1-201ENST00000413233 ZKSCAN2Q63HK3 967 aa12.29□□□□□ -0.44
TPM3P1-201ENST00000413233 NBPF10Q6P3W6 841 aaKnown RBP12.29□□□□□ -0.44
TPM3P1-201ENST00000413233 ATF7IPQ6VMQ6 1270 aa12.29□□□□□ -0.44
TPM3P1-201ENST00000413233 NBPF15Q8N660 670 aa12.29□□□□□ -0.44
TPM3P1-201ENST00000413233 PLBD2Q8NHP8 589 aa12.29□□□□□ -0.44
TPM3P1-201ENST00000413233 AK7Q96M32 723 aa12.29□□□□□ -0.44
TPM3P1-201ENST00000413233 ZBTB1Q9Y2K1 713 aa12.29□□□□□ -0.44
TPM3P1-201ENST00000413233 TAF1LQ8IZX4 1826 aa12.29□□□□□ -0.44
TPM3P1-201ENST00000413233 C4BP0C0L5 1744 aa12.28□□□□□ -0.44
TPM3P1-201ENST00000413233 PXDNLA1KZ92 1463 aa12.28□□□□□ -0.44
TPM3P1-201ENST00000413233 KSR2Q6VAB6 950 aa12.28□□□□□ -0.44
TPM3P1-201ENST00000413233 ANKRD13DQ6ZTN6 518 aa12.28□□□□□ -0.44
TPM3P1-201ENST00000413233 TRIM28Q13263 835 aaKnown RBP12.27□□□□□ -0.45
TPM3P1-201ENST00000413233 TRAPPC3LQ5T215 181 aa12.27□□□□□ -0.45
TPM3P1-201ENST00000413233 KIF6Q6ZMV9 814 aa12.27□□□□□ -0.45
TPM3P1-201ENST00000413233 ZNF652Q9Y2D9 606 aa12.27□□□□□ -0.45
TPM3P1-201ENST00000413233 COL15A1P39059 1388 aa12.27□□□□□ -0.45
TPM3P1-201ENST00000413233 BCAR3O75815 825 aa12.26□□□□□ -0.45
TPM3P1-201ENST00000413233 COPS6Q7L5N1 327 aa12.26□□□□□ -0.45
TPM3P1-201ENST00000413233 NARFQ9UHQ1 456 aa12.26□□□□□ -0.45
TPM3P1-201ENST00000413233 HDAC5Q9UQL6 1122 aa12.26□□□□□ -0.45
TPM3P1-201ENST00000413233 MAP3K15Q6ZN16 1313 aa12.26□□□□□ -0.45
TPM3P1-201ENST00000413233 GNPATO15228 680 aa12.25□□□□□ -0.45
TPM3P1-201ENST00000413233 CANXP27824 592 aaKnown RBP12.25□□□□□ -0.45
TPM3P1-201ENST00000413233 CCT4P50991 539 aaKnown RBP12.25□□□□□ -0.45
TPM3P1-201ENST00000413233 RRP1P56182 461 aaKnown RBP12.25□□□□□ -0.45
TPM3P1-201ENST00000413233 NEXNQ0ZGT2 675 aa12.25□□□□□ -0.45
TPM3P1-201ENST00000413233 FKBP5Q13451 457 aaPredicted RBP12.25□□□□□ -0.45
TPM3P1-201ENST00000413233 MSL1Q68DK7 614 aa12.25□□□□□ -0.45
TPM3P1-201ENST00000413233 GIGYF2Q6Y7W6 1299 aaKnown RBP12.25□□□□□ -0.45
TPM3P1-201ENST00000413233 NOB1Q9ULX3 412 aaKnown RBP12.25□□□□□ -0.45
TPM3P1-201ENST00000413233 ABCC4O15439 1325 aa12.24□□□□□ -0.45
TPM3P1-201ENST00000413233 ALDH1L1O75891 902 aa12.24□□□□□ -0.45
TPM3P1-201ENST00000413233 ERICH6BQ5W0A0 696 aa12.24□□□□□ -0.45
TPM3P1-201ENST00000413233 INTS3Q68E01 1043 aaKnown RBP12.24□□□□□ -0.45
TPM3P1-201ENST00000413233 DZIP3Q86Y13 1208 aaKnown RBP12.24□□□□□ -0.45
TPM3P1-201ENST00000413233 COL23A1Q86Y22 540 aaPredicted RBP12.24□□□□□ -0.45
TPM3P1-201ENST00000413233 DZIP1LQ8IYY4 767 aaKnown RBP12.24□□□□□ -0.45
TPM3P1-201ENST00000413233 XAGE3Q8WTP9 111 aa12.24□□□□□ -0.45
TPM3P1-201ENST00000413233 DNAAF4Q8WXU2 420 aa12.24□□□□□ -0.45
TPM3P1-201ENST00000413233 METTL22Q9BUU2 404 aaPredicted RBP12.24□□□□□ -0.45
TPM3P1-201ENST00000413233 PHAXQ9H814 394 aaKnown RBP12.24□□□□□ -0.45
TPM3P1-201ENST00000413233 PI4KAP2A4QPH2 592 aa12.23□□□□□ -0.45
TPM3P1-201ENST00000413233 ZPR1O75312 459 aa12.23□□□□□ -0.45
TPM3P1-201ENST00000413233 TRIM27P14373 513 aa12.23□□□□□ -0.45
TPM3P1-201ENST00000413233 HSP90B1P14625 803 aaKnown RBP12.23□□□□□ -0.45
TPM3P1-201ENST00000413233 MYL6BP14649 208 aa12.23□□□□□ -0.45
TPM3P1-201ENST00000413233 RFC4P35249 363 aa12.23□□□□□ -0.45
TPM3P1-201ENST00000413233 PROSER3Q2NL68 480 aa12.23□□□□□ -0.45
TPM3P1-201ENST00000413233 PARP10Q53GL7 1025 aa12.23□□□□□ -0.45
TPM3P1-201ENST00000413233 RIC3Q7Z5B4 369 aa12.23□□□□□ -0.45
TPM3P1-201ENST00000413233 REM2Q8IYK8 340 aaPredicted RBP12.23□□□□□ -0.45
TPM3P1-201ENST00000413233 PI4KAP1Q8N8J0 262 aa12.23□□□□□ -0.45
TPM3P1-201ENST00000413233 LINS1Q8NG48 757 aa12.23□□□□□ -0.45
TPM3P1-201ENST00000413233 ARHGEF1Q92888 912 aaKnown RBP12.23□□□□□ -0.45
TPM3P1-201ENST00000413233 MYH14Q7Z406 1995 aaKnown RBP12.23□□□□□ -0.45
TPM3P1-201ENST00000413233 WDR90Q96KV7 1748 aa12.23□□□□□ -0.45
TPM3P1-201ENST00000413233 USP42Q9H9J4 1324 aaKnown RBP12.22□□□□□ -0.45
TPM3P1-201ENST00000413233 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.22□□□□□ -0.45
TPM3P1-201ENST00000413233 KIF3CO14782 793 aa12.22□□□□□ -0.45
TPM3P1-201ENST00000413233 CAMTA2O94983 1202 aa12.22□□□□□ -0.45
TPM3P1-201ENST00000413233 TCIRG1Q13488 830 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms