RNA–Protein interactions for RNA: ENST00000411971.5

SCAMP4-203, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 783 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-203ENST00000411971 HLFQ16534 295 aa21.95■■□□□ 1.1
SCAMP4-203ENST00000411971 CNBD1Q8NA66 436 aa21.95■■□□□ 1.1
SCAMP4-203ENST00000411971 LMNB1P20700 586 aa21.94■■□□□ 1.1
SCAMP4-203ENST00000411971 PDE6BP35913 854 aa21.94■■□□□ 1.1
SCAMP4-203ENST00000411971 SRGNP10124 158 aa21.93■■□□□ 1.1
SCAMP4-203ENST00000411971 DNAJC5GQ8N7S2 189 aa21.93■■□□□ 1.1
SCAMP4-203ENST00000411971 KDM2BQ8NHM5 1336 aa21.92■■□□□ 1.1
SCAMP4-203ENST00000411971 NFE2L2Q16236 605 aa21.92■■□□□ 1.1
SCAMP4-203ENST00000411971 RBM46Q8TBY0 533 aaKnown RBP21.92■■□□□ 1.1
SCAMP4-203ENST00000411971 POTECB2RU33 542 aa21.91■■□□□ 1.1
SCAMP4-203ENST00000411971 EIF4A1P60842 406 aaKnown RBP21.91■■□□□ 1.1
SCAMP4-203ENST00000411971 CLEC4GQ6UXB4 293 aa21.9■■□□□ 1.1
SCAMP4-203ENST00000411971 GLTPD2A6NH11 291 aa21.89■■□□□ 1.09
SCAMP4-203ENST00000411971 FAM177BA6PVY3 158 aa21.89■■□□□ 1.09
SCAMP4-203ENST00000411971 APLP1P51693 650 aa21.89■■□□□ 1.09
SCAMP4-203ENST00000411971 PRPF40BQ6NWY9 871 aaKnown RBP21.89■■□□□ 1.09
SCAMP4-203ENST00000411971 OLFM4Q6UX06 510 aa21.89■■□□□ 1.09
SCAMP4-203ENST00000411971 NBPF5PQ86XG9 351 aaPredicted RBP21.89■■□□□ 1.09
SCAMP4-203ENST00000411971 NGEFQ8N5V2 710 aa21.89■■□□□ 1.09
SCAMP4-203ENST00000411971 ST5P78524 1137 aa21.88■■□□□ 1.09
SCAMP4-203ENST00000411971 STYK1Q6J9G0 422 aa21.88■■□□□ 1.09
SCAMP4-203ENST00000411971 TTLL7Q6ZT98 887 aa21.88■■□□□ 1.09
SCAMP4-203ENST00000411971 NPM2Q86SE8 214 aaKnown RBP21.88■■□□□ 1.09
SCAMP4-203ENST00000411971 C7orf43Q8WVR3 580 aa21.88■■□□□ 1.09
SCAMP4-203ENST00000411971 NIP7Q9Y221 180 aaKnown RBP eCLIP21.88■■□□□ 1.09
SCAMP4-203ENST00000411971 ZC3H4Q9UPT8 1303 aaKnown RBP21.87■■□□□ 1.09
SCAMP4-203ENST00000411971 KLRG2A4D1S0 409 aaPredicted RBP21.87■■□□□ 1.09
SCAMP4-203ENST00000411971 SLC51AQ86UW1 340 aa21.86■■□□□ 1.09
SCAMP4-203ENST00000411971 C16orf71Q8IYS4 520 aaPredicted RBP21.86■■□□□ 1.09
SCAMP4-203ENST00000411971 MASTLQ96GX5 879 aa21.86■■□□□ 1.09
SCAMP4-203ENST00000411971 PDZRN3Q9UPQ7 1066 aa21.86■■□□□ 1.09
SCAMP4-203ENST00000411971 ABCC12Q96J65 1359 aa21.86■■□□□ 1.09
SCAMP4-203ENST00000411971 NPHP1O15259 732 aa21.85■■□□□ 1.09
SCAMP4-203ENST00000411971 RRP7AQ9Y3A4 280 aaKnown RBP21.85■■□□□ 1.09
SCAMP4-203ENST00000411971 LTBP3Q9NS15 1303 aa21.84■■□□□ 1.09
SCAMP4-203ENST00000411971 DDX10Q13206 875 aaKnown RBP21.84■■□□□ 1.09
SCAMP4-203ENST00000411971 CNKSR1Q969H4 720 aa21.84■■□□□ 1.09
SCAMP4-203ENST00000411971 ZNF652Q9Y2D9 606 aa21.84■■□□□ 1.09
SCAMP4-203ENST00000411971 MYL6BP14649 208 aa21.83■■□□□ 1.09
SCAMP4-203ENST00000411971 FSTL1Q12841 308 aa21.83■■□□□ 1.09
SCAMP4-203ENST00000411971 LRP10Q7Z4F1 713 aa21.83■■□□□ 1.09
SCAMP4-203ENST00000411971 PNISRQ8TF01 805 aaKnown RBP21.83■■□□□ 1.09
SCAMP4-203ENST00000411971 UBN2Q6ZU65 1347 aa21.82■■□□□ 1.08
SCAMP4-203ENST00000411971 PCNTO95613 3336 aa21.82■■□□□ 1.08
SCAMP4-203ENST00000411971 ERFEQ4G0M1 354 aa21.82■■□□□ 1.08
SCAMP4-203ENST00000411971 NUTM1Q86Y26 1132 aa21.82■■□□□ 1.08
SCAMP4-203ENST00000411971 TAOK3Q9H2K8 898 aa21.82■■□□□ 1.08
SCAMP4-203ENST00000411971 MAP3K15Q6ZN16 1313 aa21.81■■□□□ 1.08
SCAMP4-203ENST00000411971 RGL2O15211 777 aa21.81■■□□□ 1.08
SCAMP4-203ENST00000411971 NEFMP07197 916 aa21.81■■□□□ 1.08
SCAMP4-203ENST00000411971 VEGFAP15692 232 aaPredicted RBP21.81■■□□□ 1.08
SCAMP4-203ENST00000411971 NPR1P16066 1061 aa21.81■■□□□ 1.08
SCAMP4-203ENST00000411971 PDIA6Q15084 440 aa21.81■■□□□ 1.08
SCAMP4-203ENST00000411971 TPTE2Q6XPS3 522 aa21.81■■□□□ 1.08
SCAMP4-203ENST00000411971 MAPK8IP3Q9UPT6 1336 aa21.8■■□□□ 1.08
SCAMP4-203ENST00000411971 SNED1Q8TER0 1413 aa21.8■■□□□ 1.08
SCAMP4-203ENST00000411971 GPTP24298 496 aa21.8■■□□□ 1.08
SCAMP4-203ENST00000411971 RIPK4P57078 832 aa21.8■■□□□ 1.08
SCAMP4-203ENST00000411971 PROSER3Q2NL68 480 aa21.8■■□□□ 1.08
SCAMP4-203ENST00000411971 ZBTB3Q9H5J0 574 aa21.8■■□□□ 1.08
SCAMP4-203ENST00000411971 DDNO94850 711 aaPredicted RBP21.79■■□□□ 1.08
SCAMP4-203ENST00000411971 ANXA1P04083 346 aa21.79■■□□□ 1.08
SCAMP4-203ENST00000411971 POTEIP0CG38 1075 aa21.79■■□□□ 1.08
SCAMP4-203ENST00000411971 POTEJP0CG39 1038 aa21.79■■□□□ 1.08
SCAMP4-203ENST00000411971 TMPOP42166 694 aaKnown RBP21.79■■□□□ 1.08
SCAMP4-203ENST00000411971 RALBP1Q15311 655 aa21.79■■□□□ 1.08
SCAMP4-203ENST00000411971 CCDC146Q8IYE0 955 aa21.79■■□□□ 1.08
SCAMP4-203ENST00000411971 SMC1BQ8NDV3 1235 aa21.79■■□□□ 1.08
SCAMP4-203ENST00000411971 ERVV-1B6SEH8 477 aa21.78■■□□□ 1.08
SCAMP4-203ENST00000411971 SUSD4Q5VX71 490 aa21.78■■□□□ 1.08
SCAMP4-203ENST00000411971 C3orf67Q6ZVT6 689 aa21.78■■□□□ 1.08
SCAMP4-203ENST00000411971 TSPYL4Q9UJ04 414 aa21.78■■□□□ 1.08
SCAMP4-203ENST00000411971 COL4A5P29400 1685 aa21.78■■□□□ 1.08
SCAMP4-203ENST00000411971 KRT24Q2M2I5 525 aa21.77■■□□□ 1.08
SCAMP4-203ENST00000411971 CRY2Q49AN0 593 aa21.76■■□□□ 1.07
SCAMP4-203ENST00000411971 ZNF34Q8IZ26 560 aa21.76■■□□□ 1.07
SCAMP4-203ENST00000411971 KLRG1Q96E93 195 aa21.76■■□□□ 1.07
SCAMP4-203ENST00000411971 ZNF277Q9NRM2 450 aaPredicted RBP21.76■■□□□ 1.07
SCAMP4-203ENST00000411971 LAMB2P55268 1798 aa21.76■■□□□ 1.07
SCAMP4-203ENST00000411971 ANKRD36CQ5JPF3 1778 aa21.76■■□□□ 1.07
SCAMP4-203ENST00000411971 CCDC93Q567U6 631 aa21.75■■□□□ 1.07
SCAMP4-203ENST00000411971 MYBBP1AQ9BQG0 1328 aaKnown RBP21.75■■□□□ 1.07
SCAMP4-203ENST00000411971 ZNF541Q9H0D2 1346 aa21.75■■□□□ 1.07
SCAMP4-203ENST00000411971 NTSR2O95665 410 aa21.74■■□□□ 1.07
SCAMP4-203ENST00000411971 EIF2S2P20042 333 aaKnown RBP21.74■■□□□ 1.07
SCAMP4-203ENST00000411971 IFFO2Q5TF58 517 aa21.74■■□□□ 1.07
SCAMP4-203ENST00000411971 DPY19L2Q6NUT2 758 aa21.74■■□□□ 1.07
SCAMP4-203ENST00000411971 PNNQ9H307 717 aaKnown RBP21.74■■□□□ 1.07
SCAMP4-203ENST00000411971 TRIM35Q9UPQ4 493 aa21.74■■□□□ 1.07
SCAMP4-203ENST00000411971 FKBP4Q02790 459 aaKnown RBP eCLIP21.73■■□□□ 1.07
SCAMP4-203ENST00000411971 NEUROD2Q15784 382 aa21.73■■□□□ 1.07
SCAMP4-203ENST00000411971 GIGYF2Q6Y7W6 1299 aaKnown RBP21.73■■□□□ 1.07
SCAMP4-203ENST00000411971 KIF6Q6ZMV9 814 aa21.73■■□□□ 1.07
SCAMP4-203ENST00000411971 NECTIN2Q92692 538 aa21.73■■□□□ 1.07
SCAMP4-203ENST00000411971 TAF1P21675 1872 aa21.73■■□□□ 1.07
SCAMP4-203ENST00000411971 SCN4AP35499 1836 aa21.72■■□□□ 1.07
SCAMP4-203ENST00000411971 GTF2E1P29083 439 aaPredicted RBP21.72■■□□□ 1.07
SCAMP4-203ENST00000411971 SOGA3Q5TF21 947 aa21.72■■□□□ 1.07
SCAMP4-203ENST00000411971 RIC1Q4ADV7 1423 aa21.72■■□□□ 1.07
SCAMP4-203ENST00000411971 JMYQ8N9B5 988 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms