RNA–Protein interactions for RNA: ENST00000411553.3

HCG11-201, Transcript of HLA complex group 11, humanhuman

BASIC

Gene HCG11, Length 5,696 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG11-201ENST00000411553 TCP11L1Q9NUJ3 509 aa21.24■□□□□ 0.99
HCG11-201ENST00000411553 ADGRL1O94910 1474 aa21.23■□□□□ 0.99
HCG11-201ENST00000411553 HLA-DOAP06340 250 aa21.23■□□□□ 0.99
HCG11-201ENST00000411553 TDRD12Q587J7 1177 aaKnown RBP21.23■□□□□ 0.99
HCG11-201ENST00000411553 KIF4BQ2VIQ3 1234 aa21.23■□□□□ 0.99
HCG11-201ENST00000411553 TMEM67Q5HYA8 995 aa21.23■□□□□ 0.99
HCG11-201ENST00000411553 KAT14Q9H8E8 782 aa21.23■□□□□ 0.99
HCG11-201ENST00000411553 GSTTP1A0A1W2PQM5 241 aa21.23■□□□□ 0.99
HCG11-201ENST00000411553 ESPNB1AK53 854 aa21.23■□□□□ 0.99
HCG11-201ENST00000411553 YEATS4O95619 227 aa21.23■□□□□ 0.99
HCG11-201ENST00000411553 TSPY2A6NKD2 308 aa21.23■□□□□ 0.99
HCG11-201ENST00000411553 CCDC113Q9H0I3 377 aa21.23■□□□□ 0.99
HCG11-201ENST00000411553 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.23■□□□□ 0.99
HCG11-201ENST00000411553 TMCO3Q6UWJ1 677 aa21.22■□□□□ 0.99
HCG11-201ENST00000411553 TMEM87AQ8NBN3 555 aa21.22■□□□□ 0.99
HCG11-201ENST00000411553 CTNNBL1Q8WYA6 563 aaPredicted RBP21.22■□□□□ 0.99
HCG11-201ENST00000411553 NAIPQ13075 1403 aa21.22■□□□□ 0.99
HCG11-201ENST00000411553 IARSP41252 1262 aaKnown RBP21.22■□□□□ 0.99
HCG11-201ENST00000411553 FAM135AQ9P2D6 1515 aa21.22■□□□□ 0.99
HCG11-201ENST00000411553 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.22■□□□□ 0.99
HCG11-201ENST00000411553 MAP9Q49MG5 647 aa21.22■□□□□ 0.99
HCG11-201ENST00000411553 FBXO31Q5XUX0 539 aaPredicted RBP21.22■□□□□ 0.99
HCG11-201ENST00000411553 FSIP1Q8NA03 581 aa21.22■□□□□ 0.99
HCG11-201ENST00000411553 TOP2BQ02880 1626 aa21.22■□□□□ 0.99
HCG11-201ENST00000411553 MTIF2P46199 727 aaKnown RBP21.21■□□□□ 0.99
HCG11-201ENST00000411553 VAT1LQ9HCJ6 419 aa21.21■□□□□ 0.99
HCG11-201ENST00000411553 ATP5J2-PTCD1G3V325 749 aa21.21■□□□□ 0.99
HCG11-201ENST00000411553 USP16Q9Y5T5 823 aa21.21■□□□□ 0.99
HCG11-201ENST00000411553 RFC4P35249 363 aa21.21■□□□□ 0.99
HCG11-201ENST00000411553 MFSD6Q6ZSS7 791 aa21.21■□□□□ 0.99
HCG11-201ENST00000411553 STXBP4Q6ZWJ1 553 aa21.21■□□□□ 0.99
HCG11-201ENST00000411553 CLIP2Q9UDT6 1046 aa21.21■□□□□ 0.99
HCG11-201ENST00000411553 WDR97A6NE52 1622 aa21.21■□□□□ 0.99
HCG11-201ENST00000411553 CAMSAP2Q08AD1 1489 aa21.2■□□□□ 0.98
HCG11-201ENST00000411553 MCM3P25205 808 aa21.2■□□□□ 0.98
HCG11-201ENST00000411553 MAP2K1Q02750 393 aaPredicted RBP21.2■□□□□ 0.98
HCG11-201ENST00000411553 SNRKQ9NRH2 765 aa21.2■□□□□ 0.98
HCG11-201ENST00000411553 MACROD2A1Z1Q3 448 aa21.2■□□□□ 0.98
HCG11-201ENST00000411553 PRKCSHP14314 528 aaPredicted RBP21.2■□□□□ 0.98
HCG11-201ENST00000411553 PAFAH1B1P43034 410 aa21.2■□□□□ 0.98
HCG11-201ENST00000411553 ADGRF5Q8IZF2 1346 aa21.2■□□□□ 0.98
HCG11-201ENST00000411553 HOOK3Q86VS8 718 aa21.2■□□□□ 0.98
HCG11-201ENST00000411553 ZNF622Q969S3 477 aaKnown RBP eCLIP21.2■□□□□ 0.98
HCG11-201ENST00000411553 FERMT2Q96AC1 680 aa21.2■□□□□ 0.98
HCG11-201ENST00000411553 CCDC40Q4G0X9 1142 aa21.19■□□□□ 0.98
HCG11-201ENST00000411553 KIF18AQ8NI77 898 aa21.19■□□□□ 0.98
HCG11-201ENST00000411553 PIK3R4Q99570 1358 aa21.19■□□□□ 0.98
HCG11-201ENST00000411553 IDEP14735 1019 aa21.19■□□□□ 0.98
HCG11-201ENST00000411553 UBE3BQ7Z3V4 1068 aa21.19■□□□□ 0.98
HCG11-201ENST00000411553 CPLX3Q8WVH0 158 aa21.19■□□□□ 0.98
HCG11-201ENST00000411553 DDX19AQ9NUU7 478 aaKnown RBP21.19■□□□□ 0.98
HCG11-201ENST00000411553 ZSCAN30Q86W11 494 aa21.19■□□□□ 0.98
HCG11-201ENST00000411553 DHX37Q8IY37 1157 aaKnown RBP21.19■□□□□ 0.98
HCG11-201ENST00000411553 CCDC144CPQ8IYA2 1237 aa21.19■□□□□ 0.98
HCG11-201ENST00000411553 PYM1Q9BRP8 204 aaKnown RBP21.19■□□□□ 0.98
HCG11-201ENST00000411553 URI1O94763 535 aaPredicted RBP21.19■□□□□ 0.98
HCG11-201ENST00000411553 CEBPAP49715 358 aaPredicted RBP21.19■□□□□ 0.98
HCG11-201ENST00000411553 DNA2P51530 1060 aa21.19■□□□□ 0.98
HCG11-201ENST00000411553 INCENPQ9NQS7 918 aa21.19■□□□□ 0.98
HCG11-201ENST00000411553 TTC21AQ8NDW8 1320 aa21.18■□□□□ 0.98
HCG11-201ENST00000411553 CTNNA2P26232 953 aa21.18■□□□□ 0.98
HCG11-201ENST00000411553 ST5P78524 1137 aa21.18■□□□□ 0.98
HCG11-201ENST00000411553 IFFO1Q0D2I5 559 aa21.18■□□□□ 0.98
HCG11-201ENST00000411553 TCERG1LQ5VWI1 586 aa21.18■□□□□ 0.98
HCG11-201ENST00000411553 GOPCQ9HD26 462 aa21.18■□□□□ 0.98
HCG11-201ENST00000411553 DMRT2Q9Y5R5 561 aa21.18■□□□□ 0.98
HCG11-201ENST00000411553 SNRPA1P09661 255 aaKnown RBP21.18■□□□□ 0.98
HCG11-201ENST00000411553 IDI1Q13907 227 aa21.18■□□□□ 0.98
HCG11-201ENST00000411553 TRIM27P14373 513 aa21.18■□□□□ 0.98
HCG11-201ENST00000411553 GSTO1P78417 241 aa21.18■□□□□ 0.98
HCG11-201ENST00000411553 NCOA7Q8NI08 942 aa21.18■□□□□ 0.98
HCG11-201ENST00000411553 NSD2O96028 1365 aa21.18■□□□□ 0.98
HCG11-201ENST00000411553 USP8P40818 1118 aa21.18■□□□□ 0.98
HCG11-201ENST00000411553 PPM1FP49593 454 aaPredicted RBP21.18■□□□□ 0.98
HCG11-201ENST00000411553 CKAP2LQ8IYA6 745 aa21.18■□□□□ 0.98
HCG11-201ENST00000411553 SPDYE4A6NLX3 237 aa21.18■□□□□ 0.98
HCG11-201ENST00000411553 MYO1BO43795 1136 aa21.18■□□□□ 0.98
HCG11-201ENST00000411553 UQCRFS1P1P0C7P4 283 aa21.18■□□□□ 0.98
HCG11-201ENST00000411553 ANKRD24Q8TF21 1146 aa21.18■□□□□ 0.98
HCG11-201ENST00000411553 GJB2P29033 226 aa21.17■□□□□ 0.98
HCG11-201ENST00000411553 METAP2P50579 478 aaKnown RBP eCLIP21.17■□□□□ 0.98
HCG11-201ENST00000411553 C20orf194Q5TEA3 1177 aa21.17■□□□□ 0.98
HCG11-201ENST00000411553 PDCL2Q8N4E4 241 aa21.17■□□□□ 0.98
HCG11-201ENST00000411553 SAMM50Q9Y512 469 aa21.17■□□□□ 0.98
HCG11-201ENST00000411553 DNMBPQ6XZF7 1577 aa21.17■□□□□ 0.98
HCG11-201ENST00000411553 TRMT1LQ7Z2T5 733 aaKnown RBP21.17■□□□□ 0.98
HCG11-201ENST00000411553 CRNKL1Q9BZJ0 848 aaKnown RBP21.17■□□□□ 0.98
HCG11-201ENST00000411553 MICU3Q86XE3 530 aa21.16■□□□□ 0.98
HCG11-201ENST00000411553 FAM114A1Q8IWE2 563 aa21.16■□□□□ 0.98
HCG11-201ENST00000411553 UBA7P41226 1012 aa21.16■□□□□ 0.98
HCG11-201ENST00000411553 HAND2P61296 217 aa21.16■□□□□ 0.98
HCG11-201ENST00000411553 CCDC152Q4G0S7 254 aa21.16■□□□□ 0.98
HCG11-201ENST00000411553 MPHOSPH6Q99547 160 aaKnown RBP21.16■□□□□ 0.98
HCG11-201ENST00000411553 PI4KAP2A4QPH2 592 aa21.16■□□□□ 0.98
HCG11-201ENST00000411553 SYCP3Q8IZU3 236 aa21.16■□□□□ 0.98
HCG11-201ENST00000411553 PI4KAP1Q8N8J0 262 aa21.16■□□□□ 0.98
HCG11-201ENST00000411553 NEK1Q96PY6 1258 aa21.16■□□□□ 0.98
HCG11-201ENST00000411553 ORC3Q9UBD5 711 aaPredicted RBP21.16■□□□□ 0.98
HCG11-201ENST00000411553 CC2D2AQ9P2K1 1620 aa21.16■□□□□ 0.98
HCG11-201ENST00000411553 LARP6Q9BRS8 491 aaKnown RBP21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms