RNA–Protein interactions for RNA: ENST00000406768.1

PSEN1-205, Transcript of presenilin 1, human

TSL 2 BASIC

Gene PSEN1, Length 4,062 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSEN1-205	ENST00000406768	MLEC	Q14165	292 aa		10.54	□□□□□ -0.72
PSEN1-205	ENST00000406768	DONSON	Q9NYP3	566 aa		10.54	□□□□□ -0.72
PSEN1-205	ENST00000406768	NRBP1	Q9UHY1	535 aa		10.54	□□□□□ -0.72
PSEN1-205	ENST00000406768	CYP46A1	Q9Y6A2	500 aa		10.54	□□□□□ -0.72
PSEN1-205	ENST00000406768	ANKRD50	Q9ULJ7	1429 aa		10.54	□□□□□ -0.72
PSEN1-205	ENST00000406768	AKAP17A	Q02040	695 aa	Known RBP	10.54	□□□□□ -0.72
PSEN1-205	ENST00000406768	OLFM4	Q6UX06	510 aa		10.54	□□□□□ -0.72
PSEN1-205	ENST00000406768	TFIP11	Q9UBB9	837 aa	Known RBP	10.54	□□□□□ -0.72
PSEN1-205	ENST00000406768	SPAG9	O60271	1321 aa	Known RBP	10.54	□□□□□ -0.72
PSEN1-205	ENST00000406768	PPP2R3A	Q06190	1150 aa		10.53	□□□□□ -0.72
PSEN1-205	ENST00000406768	TSR1	Q2NL82	804 aa	Known RBP	10.53	□□□□□ -0.72
PSEN1-205	ENST00000406768	CCDC12	Q8WUD4	166 aa	Predicted RBP	10.53	□□□□□ -0.72
PSEN1-205	ENST00000406768	ADAM21	Q9UKJ8	722 aa		10.53	□□□□□ -0.72
PSEN1-205	ENST00000406768	USP16	Q9Y5T5	823 aa		10.53	□□□□□ -0.72
PSEN1-205	ENST00000406768	DNMT1	P26358	1616 aa	Known RBP	10.53	□□□□□ -0.72
PSEN1-205	ENST00000406768	SEC31A	O94979	1220 aa	Known RBP	10.53	□□□□□ -0.72
PSEN1-205	ENST00000406768	GCK	P35557	465 aa		10.53	□□□□□ -0.72
PSEN1-205	ENST00000406768	CACTIN	Q8WUQ7	758 aa	Known RBP	10.53	□□□□□ -0.72
PSEN1-205	ENST00000406768	ZNF428	Q96B54	188 aa		10.53	□□□□□ -0.72
PSEN1-205	ENST00000406768	GPATCH3	Q96I76	525 aa		10.53	□□□□□ -0.72
PSEN1-205	ENST00000406768	DISP3	Q9P2K9	1392 aa		10.53	□□□□□ -0.72
PSEN1-205	ENST00000406768	PREX2	Q70Z35	1606 aa		10.53	□□□□□ -0.72
PSEN1-205	ENST00000406768	ERCC6L2	Q5T890	1561 aa		10.53	□□□□□ -0.72
PSEN1-205	ENST00000406768	LRRFIP1	Q32MZ4	808 aa	Known RBP	10.53	□□□□□ -0.72
PSEN1-205	ENST00000406768	RPAP2	Q8IXW5	612 aa	Predicted RBP	10.53	□□□□□ -0.72
PSEN1-205	ENST00000406768	DYDC1	Q8WWB3	177 aa		10.53	□□□□□ -0.72
PSEN1-205	ENST00000406768	ZCCHC17	Q9NP64	241 aa	Known RBP	10.53	□□□□□ -0.72
PSEN1-205	ENST00000406768	TEX14	Q8IWB6	1497 aa		10.53	□□□□□ -0.72
PSEN1-205	ENST00000406768	SHANK2	Q9UPX8	1470 aa		10.53	□□□□□ -0.72
PSEN1-205	ENST00000406768	ANKRD65	E5RJM6	399 aa		10.53	□□□□□ -0.72
PSEN1-205	ENST00000406768	IPO7	O95373	1038 aa	Known RBP	10.53	□□□□□ -0.72
PSEN1-205	ENST00000406768	CHRM1	P11229	460 aa	Predicted RBP	10.53	□□□□□ -0.72
PSEN1-205	ENST00000406768	MCM3	P25205	808 aa		10.53	□□□□□ -0.72
PSEN1-205	ENST00000406768	GJB2	P29033	226 aa		10.53	□□□□□ -0.72
PSEN1-205	ENST00000406768	ME1	P48163	572 aa		10.53	□□□□□ -0.72
PSEN1-205	ENST00000406768	NEDD9	Q14511	834 aa		10.53	□□□□□ -0.72
PSEN1-205	ENST00000406768	LRRC8A	Q8IWT6	810 aa		10.53	□□□□□ -0.72
PSEN1-205	ENST00000406768	GPR161	Q8N6U8	529 aa	Known RBP	10.53	□□□□□ -0.72
PSEN1-205	ENST00000406768	CEP112	Q8N8E3	955 aa		10.53	□□□□□ -0.72
PSEN1-205	ENST00000406768	SYTL4	Q96C24	671 aa	Predicted RBP	10.53	□□□□□ -0.72
PSEN1-205	ENST00000406768	KIF5C	O60282	957 aa		10.52	□□□□□ -0.72
PSEN1-205	ENST00000406768	FOSB	P53539	338 aa		10.52	□□□□□ -0.72
PSEN1-205	ENST00000406768	ANAPC15	P60006	121 aa		10.52	□□□□□ -0.72
PSEN1-205	ENST00000406768	GNAI1	P63096	354 aa		10.52	□□□□□ -0.72
PSEN1-205	ENST00000406768	CCDC158	Q5M9N0	1113 aa		10.52	□□□□□ -0.72
PSEN1-205	ENST00000406768	AFAP1L1	Q8TED9	768 aa		10.52	□□□□□ -0.72
PSEN1-205	ENST00000406768	LARP6	Q9BRS8	491 aa	Known RBP	10.52	□□□□□ -0.72
PSEN1-205	ENST00000406768	SPATS2L	Q9NUQ6	558 aa	Known RBP	10.52	□□□□□ -0.72
PSEN1-205	ENST00000406768	POLK	Q9UBT6	870 aa		10.52	□□□□□ -0.72
PSEN1-205	ENST00000406768	ARHGEF5	Q12774	1597 aa		10.52	□□□□□ -0.73
PSEN1-205	ENST00000406768	NCOA3	Q9Y6Q9	1424 aa		10.52	□□□□□ -0.73
PSEN1-205	ENST00000406768	TOP1	P11387	765 aa	Known RBP	10.52	□□□□□ -0.73
PSEN1-205	ENST00000406768	ALDH1L2	Q3SY69	923 aa		10.52	□□□□□ -0.73
PSEN1-205	ENST00000406768	TADA2B	Q86TJ2	420 aa		10.52	□□□□□ -0.73
PSEN1-205	ENST00000406768	GCC2	Q8IWJ2	1684 aa		10.52	□□□□□ -0.73
PSEN1-205	ENST00000406768	EFCAB8	A8MWE9	144 aa		10.52	□□□□□ -0.73
PSEN1-205	ENST00000406768	MAP2K1	Q02750	393 aa	Predicted RBP	10.52	□□□□□ -0.73
PSEN1-205	ENST00000406768	JPH2	Q9BR39	696 aa	Predicted RBP	10.52	□□□□□ -0.73
PSEN1-205	ENST00000406768	PSMA5	P28066	241 aa		10.51	□□□□□ -0.73
PSEN1-205	ENST00000406768	TRDN	Q13061	729 aa		10.51	□□□□□ -0.73
PSEN1-205	ENST00000406768	RSRC1	Q96IZ7	334 aa	Known RBP	10.51	□□□□□ -0.73
PSEN1-205	ENST00000406768	KCNF1	Q9H3M0	494 aa		10.51	□□□□□ -0.73
PSEN1-205	ENST00000406768	GPATCH8	Q9UKJ3	1502 aa	Known RBP	10.51	□□□□□ -0.73
PSEN1-205	ENST00000406768	ADGB	Q8N7X0	1667 aa		10.51	□□□□□ -0.73
PSEN1-205	ENST00000406768	SYT1	P21579	422 aa		10.51	□□□□□ -0.73
PSEN1-205	ENST00000406768	MYO5C	Q9NQX4	1742 aa		10.51	□□□□□ -0.73
PSEN1-205	ENST00000406768	NPC1L1	Q9UHC9	1359 aa		10.51	□□□□□ -0.73
PSEN1-205	ENST00000406768	RBBP5	Q15291	538 aa	Known RBP	10.51	□□□□□ -0.73
PSEN1-205	ENST00000406768	SAMD1	Q6SPF0	538 aa	Predicted RBP	10.51	□□□□□ -0.73
PSEN1-205	ENST00000406768	SH2B1	Q9NRF2	756 aa	Predicted RBP	10.51	□□□□□ -0.73
PSEN1-205	ENST00000406768	CDC42BPA	Q5VT25	1732 aa		10.5	□□□□□ -0.73
PSEN1-205	ENST00000406768	ST5	P78524	1137 aa		10.5	□□□□□ -0.73
PSEN1-205	ENST00000406768	PLEKHM2	Q8IWE5	1019 aa		10.5	□□□□□ -0.73
PSEN1-205	ENST00000406768	ZNF396	Q96N95	335 aa	Predicted RBP	10.5	□□□□□ -0.73
PSEN1-205	ENST00000406768	SLC24A3	Q9HC58	644 aa		10.5	□□□□□ -0.73
PSEN1-205	ENST00000406768	NPHP3	Q7Z494	1330 aa		10.5	□□□□□ -0.73
PSEN1-205	ENST00000406768	ISM2	Q6H9L7	571 aa		10.5	□□□□□ -0.73
PSEN1-205	ENST00000406768	KIF1BP	Q96EK5	621 aa		10.5	□□□□□ -0.73
PSEN1-205	ENST00000406768	CCDC30	Q5VVM6	783 aa		10.5	□□□□□ -0.73
PSEN1-205	ENST00000406768	JAKMIP1	Q96N16	626 aa	Known RBP	10.5	□□□□□ -0.73
PSEN1-205	ENST00000406768	SCLT1	Q96NL6	688 aa		10.5	□□□□□ -0.73
PSEN1-205	ENST00000406768	CROCC2	H7BZ55	1655 aa		10.5	□□□□□ -0.73
PSEN1-205	ENST00000406768	CYP2E1	P05181	493 aa	Predicted RBP	10.49	□□□□□ -0.73
PSEN1-205	ENST00000406768	ETF1	P62495	437 aa	Known RBP	10.49	□□□□□ -0.73
PSEN1-205	ENST00000406768	CAPN7	Q9Y6W3	813 aa		10.49	□□□□□ -0.73
PSEN1-205	ENST00000406768	ATAD2	Q6PL18	1390 aa		10.49	□□□□□ -0.73
PSEN1-205	ENST00000406768	DAPK1	P53355	1430 aa		10.49	□□□□□ -0.73
PSEN1-205	ENST00000406768	CCDC141	Q6ZP82	1450 aa		10.49	□□□□□ -0.73
PSEN1-205	ENST00000406768	TUBB	P07437	444 aa		10.49	□□□□□ -0.73
PSEN1-205	ENST00000406768	TUBB4B	P68371	445 aa		10.49	□□□□□ -0.73
PSEN1-205	ENST00000406768	RBM6	P78332	1123 aa	Known RBP	10.49	□□□□□ -0.73
PSEN1-205	ENST00000406768	CNTROB	Q8N137	903 aa		10.49	□□□□□ -0.73
PSEN1-205	ENST00000406768	CFAP74	Q9C0B2	1584 aa		10.49	□□□□□ -0.73
PSEN1-205	ENST00000406768	DIAPH1	O60610	1272 aa	Known RBP	10.49	□□□□□ -0.73
PSEN1-205	ENST00000406768	TMPO	P42166	694 aa	Known RBP	10.49	□□□□□ -0.73
PSEN1-205	ENST00000406768	NOP2	P46087	812 aa	Known RBP	10.49	□□□□□ -0.73
PSEN1-205	ENST00000406768	TWISTNB	Q3B726	338 aa	Predicted RBP	10.49	□□□□□ -0.73
PSEN1-205	ENST00000406768	AOPEP	Q8N6M6	819 aa		10.49	□□□□□ -0.73
PSEN1-205	ENST00000406768	N4BP2L2	Q92802	583 aa	Predicted RBP	10.49	□□□□□ -0.73
PSEN1-205	ENST00000406768	CEP89	Q96ST8	783 aa		10.49	□□□□□ -0.73

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