RNA–Protein interactions for RNA: ENST00000406757.2

GPC3-203, Transcript of glypican 3, humanhuman

TSL 2

Gene GPC3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-203ENST00000406757 SIPA1L3O60292 1781 aaPredicted RBP10.78□□□□□ -0.68
GPC3-203ENST00000406757 ZNF790Q6PG37 636 aa10.78□□□□□ -0.68
GPC3-203ENST00000406757 ZNF496Q96IT1 587 aaPredicted RBP10.78□□□□□ -0.68
GPC3-203ENST00000406757 SLC4A9Q96Q91 983 aa10.78□□□□□ -0.68
GPC3-203ENST00000406757 MRC1P22897 1456 aa10.77□□□□□ -0.69
GPC3-203ENST00000406757 GALR2O43603 387 aaPredicted RBP10.77□□□□□ -0.69
GPC3-203ENST00000406757 VAMP4O75379 141 aa10.77□□□□□ -0.69
GPC3-203ENST00000406757 TWISTNBQ3B726 338 aaPredicted RBP10.77□□□□□ -0.69
GPC3-203ENST00000406757 TRAPPC3LQ5T215 181 aa10.77□□□□□ -0.69
GPC3-203ENST00000406757 TTC5Q8N0Z6 440 aa10.77□□□□□ -0.69
GPC3-203ENST00000406757 BCL2L13Q9BXK5 485 aa10.77□□□□□ -0.69
GPC3-203ENST00000406757 RTCBQ9Y3I0 505 aaKnown RBP10.77□□□□□ -0.69
GPC3-203ENST00000406757 PXDNLA1KZ92 1463 aa10.76□□□□□ -0.69
GPC3-203ENST00000406757 A0A0G2JLW4 131 aa10.76□□□□□ -0.69
GPC3-203ENST00000406757 EIF2S2P20042 333 aaKnown RBP10.76□□□□□ -0.69
GPC3-203ENST00000406757 ARHGEF1Q92888 912 aaKnown RBP10.76□□□□□ -0.69
GPC3-203ENST00000406757 BABAM1Q9NWV8 329 aa10.76□□□□□ -0.69
GPC3-203ENST00000406757 CICQ96RK0 1608 aaPredicted RBP10.76□□□□□ -0.69
GPC3-203ENST00000406757 KDM3BQ7LBC6 1761 aa10.75□□□□□ -0.69
GPC3-203ENST00000406757 BCAR3O75815 825 aa10.75□□□□□ -0.69
GPC3-203ENST00000406757 HSPA6P17066 643 aa10.75□□□□□ -0.69
GPC3-203ENST00000406757 NLGN1Q8N2Q7 840 aa10.75□□□□□ -0.69
GPC3-203ENST00000406757 RCAN3Q9UKA8 241 aa10.75□□□□□ -0.69
GPC3-203ENST00000406757 BCS1LQ9Y276 419 aa10.75□□□□□ -0.69
GPC3-203ENST00000406757 USP16Q9Y5T5 823 aa10.75□□□□□ -0.69
GPC3-203ENST00000406757 KIF3CO14782 793 aa10.74□□□□□ -0.69
GPC3-203ENST00000406757 GYS1P13807 737 aa10.74□□□□□ -0.69
GPC3-203ENST00000406757 RFC4P35249 363 aa10.74□□□□□ -0.69
GPC3-203ENST00000406757 PIP4K2AP48426 406 aaPredicted RBP10.74□□□□□ -0.69
GPC3-203ENST00000406757 TGFB2P61812 414 aa10.74□□□□□ -0.69
GPC3-203ENST00000406757 FMNL2Q96PY5 1086 aa10.74□□□□□ -0.69
GPC3-203ENST00000406757 SUPT16HQ9Y5B9 1047 aaKnown RBP10.74□□□□□ -0.69
GPC3-203ENST00000406757 KIAA1551Q9HCM1 1747 aa10.73□□□□□ -0.69
GPC3-203ENST00000406757 N4BP2Q86UW6 1770 aaPredicted RBP10.73□□□□□ -0.69
GPC3-203ENST00000406757 PLIN1O60240 522 aa10.73□□□□□ -0.69
GPC3-203ENST00000406757 RPS6KA4O75676 772 aa10.73□□□□□ -0.69
GPC3-203ENST00000406757 ANXA1P04083 346 aa10.73□□□□□ -0.69
GPC3-203ENST00000406757 DPEP1P16444 411 aa10.73□□□□□ -0.69
GPC3-203ENST00000406757 RARSP54136 660 aaKnown RBP10.73□□□□□ -0.69
GPC3-203ENST00000406757 RC3H1Q5TC82 1133 aaKnown RBP10.73□□□□□ -0.69
GPC3-203ENST00000406757 IFFO2Q5TF58 517 aa10.73□□□□□ -0.69
GPC3-203ENST00000406757 ARHGAP27Q6ZUM4 889 aa10.73□□□□□ -0.69
GPC3-203ENST00000406757 DNAJC10Q8IXB1 793 aa10.73□□□□□ -0.69
GPC3-203ENST00000406757 SSH1Q8WYL5 1049 aa10.73□□□□□ -0.69
GPC3-203ENST00000406757 CCDC87Q9NVE4 849 aa10.73□□□□□ -0.69
GPC3-203ENST00000406757 CNTNAP4Q9C0A0 1308 aa10.73□□□□□ -0.69
GPC3-203ENST00000406757 C10orf71Q711Q0 1435 aa10.73□□□□□ -0.69
GPC3-203ENST00000406757 COL5A3P25940 1745 aaPredicted RBP10.72□□□□□ -0.69
GPC3-203ENST00000406757 SNRPA1P09661 255 aaKnown RBP10.72□□□□□ -0.69
GPC3-203ENST00000406757 HDGFL1Q5TGJ6 251 aa10.72□□□□□ -0.69
GPC3-203ENST00000406757 PARP3Q9Y6F1 533 aa10.72□□□□□ -0.69
GPC3-203ENST00000406757 HEG1Q9ULI3 1381 aa10.72□□□□□ -0.69
GPC3-203ENST00000406757 KCPQ6ZWJ8 1503 aa10.72□□□□□ -0.69
GPC3-203ENST00000406757 ZNF831Q5JPB2 1677 aa10.72□□□□□ -0.69
GPC3-203ENST00000406757 C4AP0C0L4 1744 aa10.72□□□□□ -0.69
GPC3-203ENST00000406757 KIF13BQ9NQT8 1826 aa10.72□□□□□ -0.69
GPC3-203ENST00000406757 A1BGP04217 495 aa10.71□□□□□ -0.69
GPC3-203ENST00000406757 CRKLP46109 303 aaKnown RBP10.71□□□□□ -0.69
GPC3-203ENST00000406757 IRX6P78412 446 aaPredicted RBP10.71□□□□□ -0.69
GPC3-203ENST00000406757 PROSER3Q2NL68 480 aa10.71□□□□□ -0.69
GPC3-203ENST00000406757 G2E3Q7L622 706 aa10.71□□□□□ -0.69
GPC3-203ENST00000406757 MRPL50Q8N5N7 158 aaKnown RBP10.71□□□□□ -0.69
GPC3-203ENST00000406757 FRAT1Q92837 279 aaPredicted RBP10.71□□□□□ -0.69
GPC3-203ENST00000406757 SMC4Q9NTJ3 1288 aa10.71□□□□□ -0.69
GPC3-203ENST00000406757 SRP68Q9UHB9 627 aaKnown RBP10.71□□□□□ -0.69
GPC3-203ENST00000406757 TNNQ9UQP3 1299 aa10.71□□□□□ -0.69
GPC3-203ENST00000406757 MYL6BP14649 208 aa10.7□□□□□ -0.7
GPC3-203ENST00000406757 KCNA3P22001 575 aa10.7□□□□□ -0.7
GPC3-203ENST00000406757 MNX1P50219 401 aaPredicted RBP10.7□□□□□ -0.7
GPC3-203ENST00000406757 CHPF2Q9P2E5 772 aa10.7□□□□□ -0.7
GPC3-203ENST00000406757 CCDC30Q5VVM6 783 aa10.69□□□□□ -0.7
GPC3-203ENST00000406757 PHAXQ9H814 394 aaKnown RBP10.69□□□□□ -0.7
GPC3-203ENST00000406757 NMRK2Q9NPI5 230 aa10.69□□□□□ -0.7
GPC3-203ENST00000406757 NOB1Q9ULX3 412 aaKnown RBP10.69□□□□□ -0.7
GPC3-203ENST00000406757 UBR2Q8IWV8 1755 aa10.69□□□□□ -0.7
GPC3-203ENST00000406757 MYH14Q7Z406 1995 aaKnown RBP10.68□□□□□ -0.7
GPC3-203ENST00000406757 USP42Q9H9J4 1324 aaKnown RBP10.68□□□□□ -0.7
GPC3-203ENST00000406757 CT47B1P0C2W7 299 aaPredicted RBP10.68□□□□□ -0.7
GPC3-203ENST00000406757 CANXP27824 592 aaKnown RBP10.68□□□□□ -0.7
GPC3-203ENST00000406757 DDR1Q08345 913 aa10.68□□□□□ -0.7
GPC3-203ENST00000406757 INTS5Q6P9B9 1019 aaKnown RBP10.68□□□□□ -0.7
GPC3-203ENST00000406757 PHF12Q96QT6 1004 aa10.68□□□□□ -0.7
GPC3-203ENST00000406757 PIM2Q9P1W9 311 aa10.68□□□□□ -0.7
GPC3-203ENST00000406757 ZNF330Q9Y3S2 320 aaPredicted RBP10.68□□□□□ -0.7
GPC3-203ENST00000406757 TJP1Q07157 1748 aa10.67□□□□□ -0.7
GPC3-203ENST00000406757 NBPF26B4DH59 902 aa10.67□□□□□ -0.7
GPC3-203ENST00000406757 TOMM70O94826 608 aa10.67□□□□□ -0.7
GPC3-203ENST00000406757 HOXB7P09629 217 aa10.67□□□□□ -0.7
GPC3-203ENST00000406757 CYP19A1P11511 503 aaPredicted RBP10.67□□□□□ -0.7
GPC3-203ENST00000406757 CHRNA5P30532 468 aa10.67□□□□□ -0.7
GPC3-203ENST00000406757 AIMP1Q12904 312 aaKnown RBP10.67□□□□□ -0.7
GPC3-203ENST00000406757 PDIA6Q15084 440 aa10.67□□□□□ -0.7
GPC3-203ENST00000406757 ALDH1L2Q3SY69 923 aa10.67□□□□□ -0.7
GPC3-203ENST00000406757 C9orf131Q5VYM1 1079 aa10.67□□□□□ -0.7
GPC3-203ENST00000406757 NBPF10Q6P3W6 841 aaKnown RBP10.67□□□□□ -0.7
GPC3-203ENST00000406757 VSIG10Q8N0Z9 540 aa10.67□□□□□ -0.7
GPC3-203ENST00000406757 NBPF15Q8N660 670 aa10.67□□□□□ -0.7
GPC3-203ENST00000406757 STK31Q9BXU1 1019 aa10.67□□□□□ -0.7
GPC3-203ENST00000406757 APLP1P51693 650 aa10.66□□□□□ -0.7
GPC3-203ENST00000406757 RRP1P56182 461 aaKnown RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 1041.3 ms