RNA–Protein interactions for RNA: ENST00000405444.3

TBC1D1-204, Transcript of TBC1 domain family member 1, humanhuman

TSL 4

Gene TBC1D1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D1-204ENST00000405444 STYK1Q6J9G0 422 aa22.22■■□□□ 1.15
TBC1D1-204ENST00000405444 NBPF5PQ86XG9 351 aaPredicted RBP22.22■■□□□ 1.15
TBC1D1-204ENST00000405444 CNKSR1Q969H4 720 aa22.22■■□□□ 1.15
TBC1D1-204ENST00000405444 ZNF622Q969S3 477 aaKnown RBP eCLIP22.22■■□□□ 1.15
TBC1D1-204ENST00000405444 ERBB4Q15303 1308 aa22.21■■□□□ 1.15
TBC1D1-204ENST00000405444 COL11A2P13942 1736 aaPredicted RBP22.2■■□□□ 1.14
TBC1D1-204ENST00000405444 ERVV-1B6SEH8 477 aa22.2■■□□□ 1.14
TBC1D1-204ENST00000405444 SOGA3Q5TF21 947 aa22.2■■□□□ 1.14
TBC1D1-204ENST00000405444 TPTE2Q6XPS3 522 aa22.2■■□□□ 1.14
TBC1D1-204ENST00000405444 RIPK4P57078 832 aa22.19■■□□□ 1.14
TBC1D1-204ENST00000405444 MASTLQ96GX5 879 aa22.19■■□□□ 1.14
TBC1D1-204ENST00000405444 NIP7Q9Y221 180 aaKnown RBP eCLIP22.19■■□□□ 1.14
TBC1D1-204ENST00000405444 TNRC6CQ9HCJ0 1690 aaKnown RBP22.19■■□□□ 1.14
TBC1D1-204ENST00000405444 ARFGEF2Q9Y6D5 1785 aa22.18■■□□□ 1.14
TBC1D1-204ENST00000405444 SRGNP10124 158 aa22.18■■□□□ 1.14
TBC1D1-204ENST00000405444 RASSF7Q02833 373 aa22.18■■□□□ 1.14
TBC1D1-204ENST00000405444 THUMPD2Q9BTF0 503 aaKnown RBP22.18■■□□□ 1.14
TBC1D1-204ENST00000405444 NMRK2Q9NPI5 230 aa22.18■■□□□ 1.14
TBC1D1-204ENST00000405444 TSPYL4Q9UJ04 414 aa22.18■■□□□ 1.14
TBC1D1-204ENST00000405444 TMPOP42166 694 aaKnown RBP22.17■■□□□ 1.14
TBC1D1-204ENST00000405444 C16orf71Q8IYS4 520 aaPredicted RBP22.17■■□□□ 1.14
TBC1D1-204ENST00000405444 LTBP3Q9NS15 1303 aa22.16■■□□□ 1.14
TBC1D1-204ENST00000405444 KLRG2A4D1S0 409 aaPredicted RBP22.16■■□□□ 1.14
TBC1D1-204ENST00000405444 KIF6Q6ZMV9 814 aa22.16■■□□□ 1.14
TBC1D1-204ENST00000405444 RBM46Q8TBY0 533 aaKnown RBP22.16■■□□□ 1.14
TBC1D1-204ENST00000405444 MAP3K15Q6ZN16 1313 aa22.15■■□□□ 1.14
TBC1D1-204ENST00000405444 NFKBIEO00221 500 aa22.15■■□□□ 1.14
TBC1D1-204ENST00000405444 WDR43Q15061 677 aaKnown RBP eCLIP22.15■■□□□ 1.14
TBC1D1-204ENST00000405444 CCDC24Q8N4L8 307 aa22.15■■□□□ 1.14
TBC1D1-204ENST00000405444 NYXQ9GZU5 481 aa22.15■■□□□ 1.14
TBC1D1-204ENST00000405444 FER1L6Q2WGJ9 1857 aa22.15■■□□□ 1.14
TBC1D1-204ENST00000405444 C21orf2O43822 256 aa22.14■■□□□ 1.13
TBC1D1-204ENST00000405444 NPR1P16066 1061 aa22.14■■□□□ 1.13
TBC1D1-204ENST00000405444 IBTKQ9P2D0 1353 aaPredicted RBP22.13■■□□□ 1.13
TBC1D1-204ENST00000405444 GLTPD2A6NH11 291 aa22.13■■□□□ 1.13
TBC1D1-204ENST00000405444 HLFQ16534 295 aa22.13■■□□□ 1.13
TBC1D1-204ENST00000405444 PRPF40BQ6NWY9 871 aaKnown RBP22.13■■□□□ 1.13
TBC1D1-204ENST00000405444 RUNDC1Q96C34 613 aa22.13■■□□□ 1.13
TBC1D1-204ENST00000405444 RRP7AQ9Y3A4 280 aaKnown RBP22.13■■□□□ 1.13
TBC1D1-204ENST00000405444 TIAM2Q8IVF5 1701 aa22.12■■□□□ 1.13
TBC1D1-204ENST00000405444 APLP1P51693 650 aa22.12■■□□□ 1.13
TBC1D1-204ENST00000405444 FSTL1Q12841 308 aa22.12■■□□□ 1.13
TBC1D1-204ENST00000405444 TAOK3Q9H2K8 898 aa22.12■■□□□ 1.13
TBC1D1-204ENST00000405444 NUP98P52948 1817 aa22.12■■□□□ 1.13
TBC1D1-204ENST00000405444 CCDC88AQ3V6T2 1871 aa22.11■■□□□ 1.13
TBC1D1-204ENST00000405444 SLX4Q8IY92 1834 aa22.11■■□□□ 1.13
TBC1D1-204ENST00000405444 GTF2E1P29083 439 aaPredicted RBP22.11■■□□□ 1.13
TBC1D1-204ENST00000405444 DICER1Q9UPY3 1922 aaKnown RBP22.11■■□□□ 1.13
TBC1D1-204ENST00000405444 PRELPP51888 382 aa22.1■■□□□ 1.13
TBC1D1-204ENST00000405444 RIC1Q4ADV7 1423 aa22.1■■□□□ 1.13
TBC1D1-204ENST00000405444 DPY19L2Q6NUT2 758 aa22.1■■□□□ 1.13
TBC1D1-204ENST00000405444 NGEFQ8N5V2 710 aa22.1■■□□□ 1.13
TBC1D1-204ENST00000405444 PRKRIP1Q9H875 184 aaPredicted RBP22.1■■□□□ 1.13
TBC1D1-204ENST00000405444 CEP350Q5VT06 3117 aa22.1■■□□□ 1.13
TBC1D1-204ENST00000405444 MYL6BP14649 208 aa22.09■■□□□ 1.13
TBC1D1-204ENST00000405444 ALDH1B1P30837 517 aa22.09■■□□□ 1.13
TBC1D1-204ENST00000405444 RRAGCQ9HB90 399 aa22.09■■□□□ 1.13
TBC1D1-204ENST00000405444 VEGFAP15692 232 aaPredicted RBP22.08■■□□□ 1.13
TBC1D1-204ENST00000405444 CCDC93Q567U6 631 aa22.08■■□□□ 1.13
TBC1D1-204ENST00000405444 GIGYF2Q6Y7W6 1299 aaKnown RBP22.08■■□□□ 1.13
TBC1D1-204ENST00000405444 TTLL7Q6ZT98 887 aa22.08■■□□□ 1.13
TBC1D1-204ENST00000405444 CACNA1SQ13698 1873 aa22.08■■□□□ 1.13
TBC1D1-204ENST00000405444 ERFEQ4G0M1 354 aa22.07■■□□□ 1.12
TBC1D1-204ENST00000405444 C7orf43Q8WVR3 580 aa22.07■■□□□ 1.12
TBC1D1-204ENST00000405444 ZNF219Q9P2Y4 722 aaPredicted RBP22.07■■□□□ 1.12
TBC1D1-204ENST00000405444 CHL1O00533 1208 aa22.06■■□□□ 1.12
TBC1D1-204ENST00000405444 CRY2Q49AN0 593 aa22.06■■□□□ 1.12
TBC1D1-204ENST00000405444 PARP10Q53GL7 1025 aa22.06■■□□□ 1.12
TBC1D1-204ENST00000405444 CCDC146Q8IYE0 955 aa22.06■■□□□ 1.12
TBC1D1-204ENST00000405444 ADAMTS8Q9UP79 889 aa22.06■■□□□ 1.12
TBC1D1-204ENST00000405444 FAM177BA6PVY3 158 aa22.05■■□□□ 1.12
TBC1D1-204ENST00000405444 LRP10Q7Z4F1 713 aa22.05■■□□□ 1.12
TBC1D1-204ENST00000405444 PPP1R42Q7Z4L9 355 aa22.05■■□□□ 1.12
TBC1D1-204ENST00000405444 ZNF34Q8IZ26 560 aa22.05■■□□□ 1.12
TBC1D1-204ENST00000405444 RTKN2Q8IZC4 609 aa22.05■■□□□ 1.12
TBC1D1-204ENST00000405444 SMC1BQ8NDV3 1235 aa22.05■■□□□ 1.12
TBC1D1-204ENST00000405444 ZBTB3Q9H5J0 574 aa22.05■■□□□ 1.12
TBC1D1-204ENST00000405444 WDR90Q96KV7 1748 aa22.05■■□□□ 1.12
TBC1D1-204ENST00000405444 HOXB7P09629 217 aa22.04■■□□□ 1.12
TBC1D1-204ENST00000405444 EIF2S2P20042 333 aaKnown RBP22.04■■□□□ 1.12
TBC1D1-204ENST00000405444 PDIA6Q15084 440 aa22.04■■□□□ 1.12
TBC1D1-204ENST00000405444 NEUROD2Q15784 382 aa22.04■■□□□ 1.12
TBC1D1-204ENST00000405444 TRIM35Q9UPQ4 493 aa22.04■■□□□ 1.12
TBC1D1-204ENST00000405444 GRIPAP1Q4V328 841 aa22.03■■□□□ 1.12
TBC1D1-204ENST00000405444 RNF123Q5XPI4 1314 aa22.03■■□□□ 1.12
TBC1D1-204ENST00000405444 UBN2Q6ZU65 1347 aa22.03■■□□□ 1.12
TBC1D1-204ENST00000405444 ABCC12Q96J65 1359 aa22.02■■□□□ 1.12
TBC1D1-204ENST00000405444 FKBP4Q02790 459 aaKnown RBP eCLIP22.02■■□□□ 1.12
TBC1D1-204ENST00000405444 HSP90AB3PQ58FF7 597 aa22.02■■□□□ 1.12
TBC1D1-204ENST00000405444 CC2D2BQ6DHV5 1058 aa22.02■■□□□ 1.12
TBC1D1-204ENST00000405444 HOXA10P31260 410 aaPredicted RBP22.01■■□□□ 1.11
TBC1D1-204ENST00000405444 SUSD4Q5VX71 490 aa22.01■■□□□ 1.11
TBC1D1-204ENST00000405444 NUTM1Q86Y26 1132 aa22.01■■□□□ 1.11
TBC1D1-204ENST00000405444 NTSR2O95665 410 aa22■■□□□ 1.11
TBC1D1-204ENST00000405444 GPTP24298 496 aa22■■□□□ 1.11
TBC1D1-204ENST00000405444 ZEB1P37275 1124 aaPredicted RBP22■■□□□ 1.11
TBC1D1-204ENST00000405444 RPGRQ92834 1020 aaKnown RBP22■■□□□ 1.11
TBC1D1-204ENST00000405444 CFAP44Q96MT7 982 aa22■■□□□ 1.11
TBC1D1-204ENST00000405444 DDX21Q9NR30 783 aaKnown RBP eCLIP22■■□□□ 1.11
TBC1D1-204ENST00000405444 CALD1Q05682 793 aaKnown RBP21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 247 ms