RNA–Protein interactions for RNA: ENST00000402554.7

NDEL1-203, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 5 BASIC

Gene NDEL1, Length 1,858 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-203ENST00000402554 PTGER2P43116 358 aa16.5■□□□□ 0.23
NDEL1-203ENST00000402554 INTS3Q68E01 1043 aaKnown RBP16.49■□□□□ 0.23
NDEL1-203ENST00000402554 CYP19A1P11511 503 aaPredicted RBP16.48■□□□□ 0.23
NDEL1-203ENST00000402554 RGS3P49796 1198 aa16.48■□□□□ 0.23
NDEL1-203ENST00000402554 EIF4A1P60842 406 aaKnown RBP16.48■□□□□ 0.23
NDEL1-203ENST00000402554 INTS5Q6P9B9 1019 aaKnown RBP16.48■□□□□ 0.23
NDEL1-203ENST00000402554 FMNL2Q96PY5 1086 aa16.48■□□□□ 0.23
NDEL1-203ENST00000402554 SSFA2P28290 1259 aa16.48■□□□□ 0.23
NDEL1-203ENST00000402554 RTCBQ9Y3I0 505 aaKnown RBP16.48■□□□□ 0.23
NDEL1-203ENST00000402554 LAMB4A4D0S4 1761 aa16.48■□□□□ 0.23
NDEL1-203ENST00000402554 HOXB7P09629 217 aa16.47■□□□□ 0.23
NDEL1-203ENST00000402554 PDE4AP27815 886 aa16.47■□□□□ 0.23
NDEL1-203ENST00000402554 RC3H1Q5TC82 1133 aaKnown RBP16.47■□□□□ 0.23
NDEL1-203ENST00000402554 VSIG10Q8N0Z9 540 aa16.47■□□□□ 0.23
NDEL1-203ENST00000402554 SGIP1Q9BQI5 828 aa16.47■□□□□ 0.23
NDEL1-203ENST00000402554 CHMP4AQ9BY43 222 aa16.47■□□□□ 0.23
NDEL1-203ENST00000402554 CCDC87Q9NVE4 849 aa16.47■□□□□ 0.23
NDEL1-203ENST00000402554 PPP1R1BQ9UD71 204 aaPredicted RBP16.47■□□□□ 0.23
NDEL1-203ENST00000402554 ZBTB1Q9Y2K1 713 aa16.47■□□□□ 0.23
NDEL1-203ENST00000402554 G2E3Q7L622 706 aa16.46■□□□□ 0.23
NDEL1-203ENST00000402554 RPS6KA4O75676 772 aa16.46■□□□□ 0.22
NDEL1-203ENST00000402554 HMGB2P26583 209 aaKnown RBP16.46■□□□□ 0.22
NDEL1-203ENST00000402554 HDGFL1Q5TGJ6 251 aa16.46■□□□□ 0.22
NDEL1-203ENST00000402554 FLAD1Q8NFF5 587 aa16.46■□□□□ 0.22
NDEL1-203ENST00000402554 PIP4K2AP48426 406 aaPredicted RBP16.45■□□□□ 0.22
NDEL1-203ENST00000402554 SLC16A10Q8TF71 515 aa16.45■□□□□ 0.22
NDEL1-203ENST00000402554 NECTIN2Q92692 538 aa16.45■□□□□ 0.22
NDEL1-203ENST00000402554 ARHGEF1Q92888 912 aaKnown RBP16.45■□□□□ 0.22
NDEL1-203ENST00000402554 BACH2Q9BYV9 841 aa16.45■□□□□ 0.22
NDEL1-203ENST00000402554 PDZRN3Q9UPQ7 1066 aa16.45■□□□□ 0.22
NDEL1-203ENST00000402554 TRAPPC3LQ5T215 181 aa16.44■□□□□ 0.22
NDEL1-203ENST00000402554 CACNA1FO60840 1977 aa16.44■□□□□ 0.22
NDEL1-203ENST00000402554 FLIIQ13045 1269 aa16.44■□□□□ 0.22
NDEL1-203ENST00000402554 SRP68Q9UHB9 627 aaKnown RBP16.44■□□□□ 0.22
NDEL1-203ENST00000402554 USP16Q9Y5T5 823 aa16.44■□□□□ 0.22
NDEL1-203ENST00000402554 A1BGP04217 495 aa16.43■□□□□ 0.22
NDEL1-203ENST00000402554 C1orf115Q9H7X2 142 aa16.43■□□□□ 0.22
NDEL1-203ENST00000402554 COL15A1P39059 1388 aa16.43■□□□□ 0.22
NDEL1-203ENST00000402554 CCT4P50991 539 aaKnown RBP16.42■□□□□ 0.22
NDEL1-203ENST00000402554 SMC5Q8IY18 1101 aa16.42■□□□□ 0.22
NDEL1-203ENST00000402554 STARD3NLO95772 234 aa16.42■□□□□ 0.22
NDEL1-203ENST00000402554 SNRPA1P09661 255 aaKnown RBP16.42■□□□□ 0.22
NDEL1-203ENST00000402554 RFC4P35249 363 aa16.42■□□□□ 0.22
NDEL1-203ENST00000402554 FKBP5Q13451 457 aaPredicted RBP16.42■□□□□ 0.22
NDEL1-203ENST00000402554 KLHL34Q8N239 644 aa16.42■□□□□ 0.22
NDEL1-203ENST00000402554 ZNF330Q9Y3S2 320 aaPredicted RBP16.42■□□□□ 0.22
NDEL1-203ENST00000402554 F6X3S4 739 aa16.41■□□□□ 0.22
NDEL1-203ENST00000402554 EIF2S2P20042 333 aaKnown RBP16.41■□□□□ 0.22
NDEL1-203ENST00000402554 POLD1P28340 1107 aa16.41■□□□□ 0.22
NDEL1-203ENST00000402554 SLC4A10Q6U841 1118 aa16.41■□□□□ 0.22
NDEL1-203ENST00000402554 ARXQ96QS3 562 aa16.41■□□□□ 0.22
NDEL1-203ENST00000402554 ADRA2BP18089 450 aa16.4■□□□□ 0.22
NDEL1-203ENST00000402554 FAM161AQ3B820 660 aa16.4■□□□□ 0.22
NDEL1-203ENST00000402554 TEX13AQ9BXU3 409 aaPredicted RBP16.39■□□□□ 0.22
NDEL1-203ENST00000402554 FHDC1Q9C0D6 1143 aaPredicted RBP16.39■□□□□ 0.22
NDEL1-203ENST00000402554 SCN7AQ01118 1682 aa16.39■□□□□ 0.21
NDEL1-203ENST00000402554 USP42Q9H9J4 1324 aaKnown RBP16.39■□□□□ 0.21
NDEL1-203ENST00000402554 GIGYF1O75420 1035 aaPredicted RBP16.39■□□□□ 0.21
NDEL1-203ENST00000402554 GYS1P13807 737 aa16.39■□□□□ 0.21
NDEL1-203ENST00000402554 GCC1Q96CN9 775 aa16.38■□□□□ 0.21
NDEL1-203ENST00000402554 CHPF2Q9P2E5 772 aa16.38■□□□□ 0.21
NDEL1-203ENST00000402554 BCORQ6W2J9 1755 aa16.38■□□□□ 0.21
NDEL1-203ENST00000402554 USPL1Q5W0Q7 1092 aa16.37■□□□□ 0.21
NDEL1-203ENST00000402554 PXDNLA1KZ92 1463 aa16.37■□□□□ 0.21
NDEL1-203ENST00000402554 EIF5P55010 431 aaKnown RBP16.37■□□□□ 0.21
NDEL1-203ENST00000402554 SIRT2Q8IXJ6 389 aa16.37■□□□□ 0.21
NDEL1-203ENST00000402554 MEIS3Q99687 375 aa16.37■□□□□ 0.21
NDEL1-203ENST00000402554 PHAXQ9H814 394 aaKnown RBP16.37■□□□□ 0.21
NDEL1-203ENST00000402554 NBPF26B4DH59 902 aa16.36■□□□□ 0.21
NDEL1-203ENST00000402554 NBPF10Q6P3W6 841 aaKnown RBP16.36■□□□□ 0.21
NDEL1-203ENST00000402554 RPAP2Q8IXW5 612 aaPredicted RBP16.36■□□□□ 0.21
NDEL1-203ENST00000402554 NBPF15Q8N660 670 aa16.36■□□□□ 0.21
NDEL1-203ENST00000402554 DBF4Q9UBU7 674 aaPredicted RBP16.36■□□□□ 0.21
NDEL1-203ENST00000402554 MMP10P09238 476 aa16.35■□□□□ 0.21
NDEL1-203ENST00000402554 NUCB1Q02818 461 aa16.35■□□□□ 0.21
NDEL1-203ENST00000402554 C8orf34Q49A92 452 aa16.35■□□□□ 0.21
NDEL1-203ENST00000402554 ANKRD44Q8N8A2 993 aa16.35■□□□□ 0.21
NDEL1-203ENST00000402554 TBC1D2BQ9UPU7 963 aa16.35■□□□□ 0.21
NDEL1-203ENST00000402554 ATP10DQ9P241 1426 aa16.35■□□□□ 0.21
NDEL1-203ENST00000402554 ZPR1O75312 459 aa16.35■□□□□ 0.21
NDEL1-203ENST00000402554 IL6STP40189 918 aaPredicted RBP16.35■□□□□ 0.21
NDEL1-203ENST00000402554 BCL2L12Q9HB09 334 aa16.35■□□□□ 0.21
NDEL1-203ENST00000402554 SYT17Q9BSW7 474 aa16.34■□□□□ 0.21
NDEL1-203ENST00000402554 NARFQ9UHQ1 456 aa16.34■□□□□ 0.21
NDEL1-203ENST00000402554 N4BP2Q86UW6 1770 aaPredicted RBP16.34■□□□□ 0.21
NDEL1-203ENST00000402554 ANP32AP39687 249 aaKnown RBP16.33■□□□□ 0.21
NDEL1-203ENST00000402554 CEP85Q6P2H3 762 aa16.33■□□□□ 0.21
NDEL1-203ENST00000402554 CHD1LQ86WJ1 897 aa16.33■□□□□ 0.21
NDEL1-203ENST00000402554 NLGN2Q8NFZ4 835 aa16.33■□□□□ 0.21
NDEL1-203ENST00000402554 AFDNP55196 1824 aaKnown RBP16.33■□□□□ 0.21
NDEL1-203ENST00000402554 GNAI3P08754 354 aa16.33■□□□□ 0.2
NDEL1-203ENST00000402554 DDR1Q08345 913 aa16.33■□□□□ 0.2
NDEL1-203ENST00000402554 ANXA1P04083 346 aa16.32■□□□□ 0.2
NDEL1-203ENST00000402554 MYL6BP14649 208 aa16.32■□□□□ 0.2
NDEL1-203ENST00000402554 NLGN1Q8N2Q7 840 aa16.32■□□□□ 0.2
NDEL1-203ENST00000402554 GNAI2P04899 355 aa16.31■□□□□ 0.2
NDEL1-203ENST00000402554 ANKRD45Q5TZF3 282 aa16.31■□□□□ 0.2
NDEL1-203ENST00000402554 DZIP3Q86Y13 1208 aaKnown RBP16.31■□□□□ 0.2
NDEL1-203ENST00000402554 DCTPP1Q9H773 170 aa16.31■□□□□ 0.2
NDEL1-203ENST00000402554 HYPKQ9NX55 129 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms