RNA–Protein interactions for RNA: ENST00000399973.1

USP16-202, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 3

Gene USP16, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-202ENST00000399973 TNRC6CQ9HCJ0 1690 aaKnown RBP11□□□□□ -0.65
USP16-202ENST00000399973 ARFGEF2Q9Y6D5 1785 aa11□□□□□ -0.65
USP16-202ENST00000399973 EIF2S2P20042 333 aaKnown RBP10.99□□□□□ -0.65
USP16-202ENST00000399973 CHRNA5P30532 468 aa10.99□□□□□ -0.65
USP16-202ENST00000399973 CCDC24Q8N4L8 307 aa10.99□□□□□ -0.65
USP16-202ENST00000399973 NECTIN2Q92692 538 aa10.99□□□□□ -0.65
USP16-202ENST00000399973 TIAM2Q8IVF5 1701 aa10.98□□□□□ -0.65
USP16-202ENST00000399973 GOLGB1Q14789 3259 aaKnown RBP10.98□□□□□ -0.65
USP16-202ENST00000399973 KIF6Q6ZMV9 814 aa10.98□□□□□ -0.65
USP16-202ENST00000399973 CNBD1Q8NA66 436 aa10.98□□□□□ -0.65
USP16-202ENST00000399973 FAM177BA6PVY3 158 aa10.97□□□□□ -0.65
USP16-202ENST00000399973 KRT24Q2M2I5 525 aa10.97□□□□□ -0.65
USP16-202ENST00000399973 SETDB2Q96T68 719 aa10.97□□□□□ -0.65
USP16-202ENST00000399973 ZBTB3Q9H5J0 574 aa10.97□□□□□ -0.65
USP16-202ENST00000399973 BABAM1Q9NWV8 329 aa10.97□□□□□ -0.65
USP16-202ENST00000399973 CCDC88AQ3V6T2 1871 aa10.97□□□□□ -0.65
USP16-202ENST00000399973 ERBB4Q15303 1308 aa10.96□□□□□ -0.65
USP16-202ENST00000399973 ANXA1P04083 346 aa10.96□□□□□ -0.65
USP16-202ENST00000399973 ST5P78524 1137 aa10.96□□□□□ -0.65
USP16-202ENST00000399973 CALD1Q05682 793 aaKnown RBP10.96□□□□□ -0.65
USP16-202ENST00000399973 DALRD3Q5D0E6 543 aaKnown RBP10.96□□□□□ -0.65
USP16-202ENST00000399973 PRR5LQ6MZQ0 368 aa10.96□□□□□ -0.65
USP16-202ENST00000399973 TTLL7Q6ZT98 887 aa10.96□□□□□ -0.65
USP16-202ENST00000399973 NBPF5PQ86XG9 351 aaPredicted RBP10.96□□□□□ -0.65
USP16-202ENST00000399973 C2CD5Q86YS7 1000 aa10.96□□□□□ -0.65
USP16-202ENST00000399973 PIM2Q9P1W9 311 aa10.96□□□□□ -0.65
USP16-202ENST00000399973 NIP7Q9Y221 180 aaKnown RBP eCLIP10.96□□□□□ -0.65
USP16-202ENST00000399973 UTRNP46939 3433 aa10.96□□□□□ -0.66
USP16-202ENST00000399973 ATP10DQ9P241 1426 aa10.95□□□□□ -0.66
USP16-202ENST00000399973 MAP3K15Q6ZN16 1313 aa10.95□□□□□ -0.66
USP16-202ENST00000399973 CHL1O00533 1208 aa10.95□□□□□ -0.66
USP16-202ENST00000399973 MBIPQ9NS73 344 aa10.95□□□□□ -0.66
USP16-202ENST00000399973 SBF1O95248 1867 aa10.95□□□□□ -0.66
USP16-202ENST00000399973 LAMB2P55268 1798 aa10.95□□□□□ -0.66
USP16-202ENST00000399973 H0YIN7 160 aa10.94□□□□□ -0.66
USP16-202ENST00000399973 KCNA3P22001 575 aa10.94□□□□□ -0.66
USP16-202ENST00000399973 GPTP24298 496 aa10.94□□□□□ -0.66
USP16-202ENST00000399973 GNAI1P63096 354 aa10.94□□□□□ -0.66
USP16-202ENST00000399973 HLFQ16534 295 aa10.94□□□□□ -0.66
USP16-202ENST00000399973 PROSER3Q2NL68 480 aa10.94□□□□□ -0.66
USP16-202ENST00000399973 HDGFL1Q5TGJ6 251 aa10.94□□□□□ -0.66
USP16-202ENST00000399973 ARHGAP27Q6ZUM4 889 aa10.94□□□□□ -0.66
USP16-202ENST00000399973 FAM9BQ8IZU0 186 aa10.94□□□□□ -0.66
USP16-202ENST00000399973 ZNF784Q8NCA9 323 aaPredicted RBP10.94□□□□□ -0.66
USP16-202ENST00000399973 CFAP44Q96MT7 982 aa10.94□□□□□ -0.66
USP16-202ENST00000399973 IFT57Q9NWB7 429 aa10.94□□□□□ -0.66
USP16-202ENST00000399973 SALL2Q9Y467 1007 aaPredicted RBP10.94□□□□□ -0.66
USP16-202ENST00000399973 SLX4Q8IY92 1834 aa10.93□□□□□ -0.66
USP16-202ENST00000399973 GTF2E1P29083 439 aaPredicted RBP10.93□□□□□ -0.66
USP16-202ENST00000399973 PDE6BP35913 854 aa10.93□□□□□ -0.66
USP16-202ENST00000399973 AIMP1Q12904 312 aaKnown RBP10.93□□□□□ -0.66
USP16-202ENST00000399973 CLEC4GQ6UXB4 293 aa10.93□□□□□ -0.66
USP16-202ENST00000399973 ZNF526Q8TF50 670 aaPredicted RBP10.93□□□□□ -0.66
USP16-202ENST00000399973 ZNF622Q969S3 477 aaKnown RBP eCLIP10.93□□□□□ -0.663e-6■■□□□ 11.5
USP16-202ENST00000399973 CHPF2Q9P2E5 772 aa10.93□□□□□ -0.66
USP16-202ENST00000399973 ABCC12Q96J65 1359 aa10.92□□□□□ -0.66
USP16-202ENST00000399973 FER1L6Q2WGJ9 1857 aa10.92□□□□□ -0.66
USP16-202ENST00000399973 ELL2O00472 640 aaPredicted RBP10.92□□□□□ -0.66
USP16-202ENST00000399973 PDIA6Q15084 440 aa10.92□□□□□ -0.66
USP16-202ENST00000399973 DUSP27Q5VZP5 1158 aa10.92□□□□□ -0.66
USP16-202ENST00000399973 BRIP1Q9BX63 1249 aa10.92□□□□□ -0.66
USP16-202ENST00000399973 ZNF219Q9P2Y4 722 aaPredicted RBP10.92□□□□□ -0.66
USP16-202ENST00000399973 ADCY9O60503 1353 aa10.91□□□□□ -0.66
USP16-202ENST00000399973 ERVV-1B6SEH8 477 aa10.91□□□□□ -0.66
USP16-202ENST00000399973 TTLL6Q8N841 843 aa10.91□□□□□ -0.66
USP16-202ENST00000399973 XAGE3Q8WTP9 111 aa10.91□□□□□ -0.66
USP16-202ENST00000399973 TSR2Q969E8 191 aaKnown RBP10.91□□□□□ -0.66
USP16-202ENST00000399973 DDX60Q8IY21 1712 aaKnown RBP10.91□□□□□ -0.66
USP16-202ENST00000399973 UBN2Q6ZU65 1347 aa10.9□□□□□ -0.66
USP16-202ENST00000399973 DICER1Q9UPY3 1922 aaKnown RBP10.9□□□□□ -0.66
USP16-202ENST00000399973 RGL2O15211 777 aa10.9□□□□□ -0.66
USP16-202ENST00000399973 HOXB7P09629 217 aa10.9□□□□□ -0.66
USP16-202ENST00000399973 ZNF853P0CG23 659 aa10.9□□□□□ -0.66
USP16-202ENST00000399973 RASSF7Q02833 373 aa10.9□□□□□ -0.66
USP16-202ENST00000399973 TPTE2Q6XPS3 522 aa10.9□□□□□ -0.66
USP16-202ENST00000399973 COPS6Q7L5N1 327 aa10.9□□□□□ -0.66
USP16-202ENST00000399973 NUTM1Q86Y26 1132 aa10.9□□□□□ -0.66
USP16-202ENST00000399973 DDX21Q9NR30 783 aaKnown RBP eCLIP10.9□□□□□ -0.66
USP16-202ENST00000399973 IBTKQ9P2D0 1353 aaPredicted RBP10.9□□□□□ -0.67
USP16-202ENST00000399973 GIGYF2Q6Y7W6 1299 aaKnown RBP10.89□□□□□ -0.67
USP16-202ENST00000399973 LRP10Q7Z4F1 713 aa10.89□□□□□ -0.67
USP16-202ENST00000399973 WWC1Q8IX03 1113 aa10.89□□□□□ -0.67
USP16-202ENST00000399973 NYXQ9GZU5 481 aa10.89□□□□□ -0.67
USP16-202ENST00000399973 DBF4Q9UBU7 674 aaPredicted RBP10.89□□□□□ -0.67
USP16-202ENST00000399973 PDZRN3Q9UPQ7 1066 aa10.89□□□□□ -0.67
USP16-202ENST00000399973 C21orf2O43822 256 aa10.88□□□□□ -0.67
USP16-202ENST00000399973 CCDC27Q2M243 656 aa10.88□□□□□ -0.67
USP16-202ENST00000399973 ERFEQ4G0M1 354 aa10.88□□□□□ -0.67
USP16-202ENST00000399973 C9orf131Q5VYM1 1079 aa10.88□□□□□ -0.67
USP16-202ENST00000399973 C8orf58Q8NAV2 365 aa10.88□□□□□ -0.67
USP16-202ENST00000399973 ZNF428Q96B54 188 aa10.88□□□□□ -0.67
USP16-202ENST00000399973 RNF181Q9P0P0 153 aa10.88□□□□□ -0.67
USP16-202ENST00000399973 CACNA1FO60840 1977 aa10.87□□□□□ -0.67
USP16-202ENST00000399973 RIC1Q4ADV7 1423 aa10.87□□□□□ -0.67
USP16-202ENST00000399973 NTSR2O95665 410 aa10.87□□□□□ -0.67
USP16-202ENST00000399973 SRGNP10124 158 aa10.87□□□□□ -0.67
USP16-202ENST00000399973 GOLGA2Q08379 1002 aa10.87□□□□□ -0.67
USP16-202ENST00000399973 PARP10Q53GL7 1025 aa10.87□□□□□ -0.67
USP16-202ENST00000399973 HSP90AB3PQ58FF7 597 aa10.87□□□□□ -0.67
USP16-202ENST00000399973 SUSD4Q5VX71 490 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms