RNA–Protein interactions for RNA: ENST00000399649.5

CACNA1C-219, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-219ENST00000399649 RAB3IL1Q8TBN0 382 aa14.17□□□□□ -0.14
CACNA1C-219ENST00000399649 BOLA2Q9H3K6 86 aa14.17□□□□□ -0.14
CACNA1C-219ENST00000399649 SERPINA10Q9UK55 444 aa14.17□□□□□ -0.14
CACNA1C-219ENST00000399649 TCP11L1Q9NUJ3 509 aa14.17□□□□□ -0.14
CACNA1C-219ENST00000399649 IFIT3O14879 490 aaKnown RBP14.17□□□□□ -0.14
CACNA1C-219ENST00000399649 STX1AQ16623 288 aa14.16□□□□□ -0.14
CACNA1C-219ENST00000399649 LRRC27Q9C0I9 530 aa14.16□□□□□ -0.14
CACNA1C-219ENST00000399649 TMC6Q7Z403 805 aa14.16□□□□□ -0.14
CACNA1C-219ENST00000399649 BICD1Q96G01 975 aa14.16□□□□□ -0.14
CACNA1C-219ENST00000399649 TRMT1Q9NXH9 659 aaKnown RBP14.16□□□□□ -0.14
CACNA1C-219ENST00000399649 GOLGA6L9A6NEM1 432 aa14.16□□□□□ -0.14
CACNA1C-219ENST00000399649 TBC1D5Q92609 795 aa14.16□□□□□ -0.14
CACNA1C-219ENST00000399649 SLC12A5Q9H2X9 1139 aa14.16□□□□□ -0.14
CACNA1C-219ENST00000399649 ERBINQ96RT1 1412 aa14.16□□□□□ -0.14
CACNA1C-219ENST00000399649 CCDC155Q8N6L0 562 aa14.16□□□□□ -0.14
CACNA1C-219ENST00000399649 ZWINTO95229 277 aa14.16□□□□□ -0.14
CACNA1C-219ENST00000399649 IFIT5Q13325 482 aaKnown RBP14.16□□□□□ -0.14
CACNA1C-219ENST00000399649 PRDM10Q9NQV6 1147 aa14.16□□□□□ -0.14
CACNA1C-219ENST00000399649 MRC2Q9UBG0 1479 aa14.16□□□□□ -0.14
CACNA1C-219ENST00000399649 CA8P35219 290 aa14.15□□□□□ -0.14
CACNA1C-219ENST00000399649 ZNF354CQ86Y25 554 aa14.15□□□□□ -0.14
CACNA1C-219ENST00000399649 EXOC6BQ9Y2D4 811 aa14.15□□□□□ -0.14
CACNA1C-219ENST00000399649 CCDC172P0C7W6 258 aa14.15□□□□□ -0.14
CACNA1C-219ENST00000399649 NFE2L2Q16236 605 aa14.15□□□□□ -0.14
CACNA1C-219ENST00000399649 CCDC82Q8N4S0 544 aa14.15□□□□□ -0.14
CACNA1C-219ENST00000399649 FSIP1Q8NA03 581 aa14.15□□□□□ -0.14
CACNA1C-219ENST00000399649 IGF1RP08069 1367 aa14.15□□□□□ -0.14
CACNA1C-219ENST00000399649 SAMM50Q9Y512 469 aa14.15□□□□□ -0.14
CACNA1C-219ENST00000399649 FCHSD2O94868 740 aa14.15□□□□□ -0.14
CACNA1C-219ENST00000399649 TMEM57Q8N5G2 664 aa14.15□□□□□ -0.14
CACNA1C-219ENST00000399649 TTC16Q8NEE8 873 aa14.15□□□□□ -0.14
CACNA1C-219ENST00000399649 TTC12Q9H892 705 aaPredicted RBP14.15□□□□□ -0.14
CACNA1C-219ENST00000399649 SMARCA5O60264 1052 aaPredicted RBP14.15□□□□□ -0.15
CACNA1C-219ENST00000399649 KIF5BP33176 963 aa14.15□□□□□ -0.15
CACNA1C-219ENST00000399649 CKAP4Q07065 602 aaKnown RBP14.15□□□□□ -0.15
CACNA1C-219ENST00000399649 CCDC174Q6PII3 467 aa14.15□□□□□ -0.15
CACNA1C-219ENST00000399649 DAAM2Q86T65 1068 aa14.15□□□□□ -0.15
CACNA1C-219ENST00000399649 GPATCH11Q8N954 259 aa14.15□□□□□ -0.15
CACNA1C-219ENST00000399649 JADE2Q9NQC1 790 aa14.14□□□□□ -0.15
CACNA1C-219ENST00000399649 MXRA7P84157 204 aa14.14□□□□□ -0.15
CACNA1C-219ENST00000399649 NSRP1Q9H0G5 558 aaKnown RBP14.14□□□□□ -0.15
CACNA1C-219ENST00000399649 SYNCQ9H7C4 482 aa14.14□□□□□ -0.15
CACNA1C-219ENST00000399649 KIF21BO75037 1637 aa14.14□□□□□ -0.15
CACNA1C-219ENST00000399649 KIAA0753Q2KHM9 967 aa14.14□□□□□ -0.15
CACNA1C-219ENST00000399649 KANK3Q6NY19 840 aa14.14□□□□□ -0.15
CACNA1C-219ENST00000399649 EHBP1Q8NDI1 1231 aa14.14□□□□□ -0.15
CACNA1C-219ENST00000399649 FBF1Q8TES7 1133 aa14.14□□□□□ -0.15
CACNA1C-219ENST00000399649 DUSP27Q5VZP5 1158 aa14.14□□□□□ -0.15
CACNA1C-219ENST00000399649 KCNH5Q8NCM2 988 aa14.14□□□□□ -0.15
CACNA1C-219ENST00000399649 DDX19AQ9NUU7 478 aaKnown RBP14.14□□□□□ -0.15
CACNA1C-219ENST00000399649 ARL1P40616 181 aaPredicted RBP14.13□□□□□ -0.15
CACNA1C-219ENST00000399649 HFM1A2PYH4 1435 aa14.13□□□□□ -0.15
CACNA1C-219ENST00000399649 KAT14Q9H8E8 782 aa14.13□□□□□ -0.15
CACNA1C-219ENST00000399649 MMRN2Q9H8L6 949 aa14.13□□□□□ -0.15
CACNA1C-219ENST00000399649 ATAD2Q6PL18 1390 aa14.13□□□□□ -0.15
CACNA1C-219ENST00000399649 GTF2F1P35269 517 aaKnown RBP eCLIP14.13□□□□□ -0.15
CACNA1C-219ENST00000399649 SNW1Q13573 536 aaKnown RBP14.13□□□□□ -0.15
CACNA1C-219ENST00000399649 IQCGQ9H095 443 aaKnown RBP14.13□□□□□ -0.15
CACNA1C-219ENST00000399649 TIGD1Q96MW7 591 aa14.12□□□□□ -0.15
CACNA1C-219ENST00000399649 EXOC1Q9NV70 894 aa14.12□□□□□ -0.15
CACNA1C-219ENST00000399649 RASAL2Q9UJF2 1139 aa14.12□□□□□ -0.15
CACNA1C-219ENST00000399649 NCOA2Q15596 1464 aa14.12□□□□□ -0.15
CACNA1C-219ENST00000399649 PLVAPQ9BX97 442 aa14.12□□□□□ -0.15
CACNA1C-219ENST00000399649 CABP5Q9NP86 173 aa14.12□□□□□ -0.15
CACNA1C-219ENST00000399649 CCT2P78371 535 aaKnown RBP14.12□□□□□ -0.15
CACNA1C-219ENST00000399649 TTF1Q15361 905 aaPredicted RBP14.12□□□□□ -0.15
CACNA1C-219ENST00000399649 APBB1IPQ7Z5R6 666 aaPredicted RBP14.12□□□□□ -0.15
CACNA1C-219ENST00000399649 CKAP2LQ8IYA6 745 aa14.12□□□□□ -0.15
CACNA1C-219ENST00000399649 UTP14AQ9BVJ6 771 aaKnown RBP14.12□□□□□ -0.15
CACNA1C-219ENST00000399649 PLEKHH2Q8IVE3 1493 aa14.12□□□□□ -0.15
CACNA1C-219ENST00000399649 TBCAO75347 108 aaKnown RBP14.12□□□□□ -0.15
CACNA1C-219ENST00000399649 OTUD6BQ8N6M0 293 aa14.12□□□□□ -0.15
CACNA1C-219ENST00000399649 POLA1P09884 1462 aaPredicted RBP14.12□□□□□ -0.15
CACNA1C-219ENST00000399649 STX6O43752 255 aa14.12□□□□□ -0.15
CACNA1C-219ENST00000399649 C16orf45Q96MC5 204 aaPredicted RBP14.12□□□□□ -0.15
CACNA1C-219ENST00000399649 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.12□□□□□ -0.15
CACNA1C-219ENST00000399649 V9GYY5 206 aaPredicted RBP14.12□□□□□ -0.15
CACNA1C-219ENST00000399649 GOLIM4O00461 696 aa14.11□□□□□ -0.15
CACNA1C-219ENST00000399649 IDEP14735 1019 aa14.11□□□□□ -0.15
CACNA1C-219ENST00000399649 XPCQ01831 940 aaPredicted RBP14.11□□□□□ -0.15
CACNA1C-219ENST00000399649 PAIP2Q9BPZ3 127 aaKnown RBP14.11□□□□□ -0.15
CACNA1C-219ENST00000399649 RMND1Q9NWS8 449 aa14.11□□□□□ -0.15
CACNA1C-219ENST00000399649 MIS18AQ9NYP9 233 aa14.11□□□□□ -0.15
CACNA1C-219ENST00000399649 TRMT112Q9UI30 125 aaKnown RBP14.11□□□□□ -0.15
CACNA1C-219ENST00000399649 LIMCH1Q9UPQ0 1083 aa14.11□□□□□ -0.15
CACNA1C-219ENST00000399649 LRRC9Q6ZRR7 1453 aa14.11□□□□□ -0.15
CACNA1C-219ENST00000399649 MYO1BO43795 1136 aa14.11□□□□□ -0.15
CACNA1C-219ENST00000399649 VAT1LQ9HCJ6 419 aa14.11□□□□□ -0.15
CACNA1C-219ENST00000399649 PDE4BQ07343 736 aa14.11□□□□□ -0.15
CACNA1C-219ENST00000399649 TRMT1LQ7Z2T5 733 aaKnown RBP14.11□□□□□ -0.15
CACNA1C-219ENST00000399649 TMEM67Q5HYA8 995 aa14.11□□□□□ -0.15
CACNA1C-219ENST00000399649 HLA-DOAP06340 250 aa14.1□□□□□ -0.15
CACNA1C-219ENST00000399649 CCDC6Q16204 474 aa14.1□□□□□ -0.15
CACNA1C-219ENST00000399649 KIF4AO95239 1232 aa14.1□□□□□ -0.15
CACNA1C-219ENST00000399649 IFT140Q96RY7 1462 aa14.1□□□□□ -0.15
CACNA1C-219ENST00000399649 HSPA4P34932 840 aa14.1□□□□□ -0.15
CACNA1C-219ENST00000399649 ZC3H6P61129 1189 aaKnown RBP14.1□□□□□ -0.15
CACNA1C-219ENST00000399649 CCDC144CPQ8IYA2 1237 aa14.1□□□□□ -0.15
CACNA1C-219ENST00000399649 NDC80O14777 642 aa14.1□□□□□ -0.15
CACNA1C-219ENST00000399649 PTCD1O75127 700 aaKnown RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms