RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 AFDNP55196 1824 aaKnown RBP18.31■□□□□ 0.52
HLA-DQB1-202ENST00000399079 CCDC24Q8N4L8 307 aa18.31■□□□□ 0.52
HLA-DQB1-202ENST00000399079 TSR2Q969E8 191 aaKnown RBP18.31■□□□□ 0.52
HLA-DQB1-202ENST00000399079 ZNF652Q9Y2D9 606 aa18.31■□□□□ 0.52
HLA-DQB1-202ENST00000399079 N4BP2Q86UW6 1770 aaPredicted RBP18.3■□□□□ 0.52
HLA-DQB1-202ENST00000399079 KIAA1551Q9HCM1 1747 aa18.3■□□□□ 0.52
HLA-DQB1-202ENST00000399079 CARMIL3Q8ND23 1372 aa18.3■□□□□ 0.52
HLA-DQB1-202ENST00000399079 HDGFL1Q5TGJ6 251 aa18.3■□□□□ 0.52
HLA-DQB1-202ENST00000399079 ZBTB3Q9H5J0 574 aa18.3■□□□□ 0.52
HLA-DQB1-202ENST00000399079 MAP3K15Q6ZN16 1313 aa18.29■□□□□ 0.52
HLA-DQB1-202ENST00000399079 KCNA3P22001 575 aa18.29■□□□□ 0.52
HLA-DQB1-202ENST00000399079 CHRNA5P30532 468 aa18.29■□□□□ 0.52
HLA-DQB1-202ENST00000399079 NCBP3Q53F19 620 aaKnown RBP18.29■□□□□ 0.52
HLA-DQB1-202ENST00000399079 DIEXFQ68CQ4 756 aaKnown RBP18.29■□□□□ 0.52
HLA-DQB1-202ENST00000399079 C8orf58Q8NAV2 365 aa18.29■□□□□ 0.52
HLA-DQB1-202ENST00000399079 CHPF2Q9P2E5 772 aa18.29■□□□□ 0.52
HLA-DQB1-202ENST00000399079 NIP7Q9Y221 180 aaKnown RBP eCLIP18.29■□□□□ 0.52
HLA-DQB1-202ENST00000399079 NRXN2Q9P2S2 1712 aa18.29■□□□□ 0.52
HLA-DQB1-202ENST00000399079 HOXB7P09629 217 aa18.28■□□□□ 0.52
HLA-DQB1-202ENST00000399079 PRR5LQ6MZQ0 368 aa18.28■□□□□ 0.52
HLA-DQB1-202ENST00000399079 KIF6Q6ZMV9 814 aa18.28■□□□□ 0.52
HLA-DQB1-202ENST00000399079 ERVV-1B6SEH8 477 aa18.28■□□□□ 0.52
HLA-DQB1-202ENST00000399079 AIMP1Q12904 312 aaKnown RBP18.28■□□□□ 0.52
HLA-DQB1-202ENST00000399079 TSPYL6Q8N831 410 aa18.28■□□□□ 0.52
HLA-DQB1-202ENST00000399079 DDX21Q9NR30 783 aaKnown RBP eCLIP18.28■□□□□ 0.52
HLA-DQB1-202ENST00000399079 FAM177BA6PVY3 158 aa18.27■□□□□ 0.51
HLA-DQB1-202ENST00000399079 CCER2I3L3R5 266 aa18.27■□□□□ 0.51
HLA-DQB1-202ENST00000399079 COPS6Q7L5N1 327 aa18.27■□□□□ 0.51
HLA-DQB1-202ENST00000399079 XAGE3Q8WTP9 111 aa18.27■□□□□ 0.51
HLA-DQB1-202ENST00000399079 BCS1LQ9Y276 419 aa18.27■□□□□ 0.51
HLA-DQB1-202ENST00000399079 RGL2O15211 777 aa18.26■□□□□ 0.51
HLA-DQB1-202ENST00000399079 NPHP1O15259 732 aa18.26■□□□□ 0.51
HLA-DQB1-202ENST00000399079 GRIN3BO60391 1043 aa18.26■□□□□ 0.51
HLA-DQB1-202ENST00000399079 NBPF5PQ86XG9 351 aaPredicted RBP18.26■□□□□ 0.51
HLA-DQB1-202ENST00000399079 CNBD1Q8NA66 436 aa18.26■□□□□ 0.51
HLA-DQB1-202ENST00000399079 IL16Q14005 1332 aa18.25■□□□□ 0.51
HLA-DQB1-202ENST00000399079 YY1P25490 414 aa18.25■□□□□ 0.51
HLA-DQB1-202ENST00000399079 WDR63Q8IWG1 891 aa18.25■□□□□ 0.51
HLA-DQB1-202ENST00000399079 SPINK5Q9NQ38 1064 aaPredicted RBP18.25■□□□□ 0.51
HLA-DQB1-202ENST00000399079 DBF4Q9UBU7 674 aaPredicted RBP18.25■□□□□ 0.51
HLA-DQB1-202ENST00000399079 GPTP24298 496 aa18.24■□□□□ 0.51
HLA-DQB1-202ENST00000399079 GIGYF2Q6Y7W6 1299 aaKnown RBP18.24■□□□□ 0.51
HLA-DQB1-202ENST00000399079 MIER1Q8N108 512 aa18.24■□□□□ 0.51
HLA-DQB1-202ENST00000399079 PIM2Q9P1W9 311 aa18.24■□□□□ 0.51
HLA-DQB1-202ENST00000399079 UBN2Q6ZU65 1347 aa18.23■□□□□ 0.51
HLA-DQB1-202ENST00000399079 NUP98P52948 1817 aa18.23■□□□□ 0.51
HLA-DQB1-202ENST00000399079 C2CD5Q86YS7 1000 aa18.23■□□□□ 0.51
HLA-DQB1-202ENST00000399079 BRIP1Q9BX63 1249 aa18.23■□□□□ 0.51
HLA-DQB1-202ENST00000399079 FANCIQ9NVI1 1328 aa18.22■□□□□ 0.51
HLA-DQB1-202ENST00000399079 ST5P78524 1137 aa18.22■□□□□ 0.51
HLA-DQB1-202ENST00000399079 TPTE2Q6XPS3 522 aa18.22■□□□□ 0.51
HLA-DQB1-202ENST00000399079 ZNF34Q8IZ26 560 aa18.22■□□□□ 0.51
HLA-DQB1-202ENST00000399079 ATP10DQ9P241 1426 aa18.22■□□□□ 0.51
HLA-DQB1-202ENST00000399079 BRCA1P38398 1863 aaKnown RBP18.21■□□□□ 0.51
HLA-DQB1-202ENST00000399079 ANKRD31Q8N7Z5 1873 aa18.21■□□□□ 0.51
HLA-DQB1-202ENST00000399079 H0YIN7 160 aa18.21■□□□□ 0.51
HLA-DQB1-202ENST00000399079 DALRD3Q5D0E6 543 aaKnown RBP18.21■□□□□ 0.51
HLA-DQB1-202ENST00000399079 PHAXQ9H814 394 aaKnown RBP18.21■□□□□ 0.51
HLA-DQB1-202ENST00000399079 HYPKQ9NX55 129 aa18.21■□□□□ 0.51
HLA-DQB1-202ENST00000399079 TCERG1O14776 1098 aaKnown RBP18.2■□□□□ 0.5
HLA-DQB1-202ENST00000399079 PDE6BP35913 854 aa18.2■□□□□ 0.5
HLA-DQB1-202ENST00000399079 TWISTNBQ3B726 338 aaPredicted RBP18.2■□□□□ 0.5
HLA-DQB1-202ENST00000399079 NUTM1Q86Y26 1132 aa18.2■□□□□ 0.5
HLA-DQB1-202ENST00000399079 GTF2E1P29083 439 aaPredicted RBP18.19■□□□□ 0.5
HLA-DQB1-202ENST00000399079 SUSD4Q5VX71 490 aa18.19■□□□□ 0.5
HLA-DQB1-202ENST00000399079 ANKRD13DQ6ZTN6 518 aa18.19■□□□□ 0.5
HLA-DQB1-202ENST00000399079 ZNF428Q96B54 188 aa18.19■□□□□ 0.5
HLA-DQB1-202ENST00000399079 ZNF521Q96K83 1311 aa18.19■□□□□ 0.5
HLA-DQB1-202ENST00000399079 CCDC30Q5VVM6 783 aa18.18■□□□□ 0.5
HLA-DQB1-202ENST00000399079 CHD4Q14839 1912 aa18.18■□□□□ 0.5
HLA-DQB1-202ENST00000399079 EXOSC9Q06265 439 aaKnown RBP18.18■□□□□ 0.5
HLA-DQB1-202ENST00000399079 ERFEQ4G0M1 354 aa18.18■□□□□ 0.5
HLA-DQB1-202ENST00000399079 PLBD2Q8NHP8 589 aa18.18■□□□□ 0.5
HLA-DQB1-202ENST00000399079 ZNF622Q969S3 477 aaKnown RBP eCLIP18.18■□□□□ 0.5
HLA-DQB1-202ENST00000399079 GOLGA2Q08379 1002 aa18.17■□□□□ 0.5
HLA-DQB1-202ENST00000399079 TCIRG1Q13488 830 aa18.17■□□□□ 0.5
HLA-DQB1-202ENST00000399079 ARHGAP27Q6ZUM4 889 aa18.17■□□□□ 0.5
HLA-DQB1-202ENST00000399079 TTLL6Q8N841 843 aa18.17■□□□□ 0.5
HLA-DQB1-202ENST00000399079 NYXQ9GZU5 481 aa18.17■□□□□ 0.5
HLA-DQB1-202ENST00000399079 ABCC12Q96J65 1359 aa18.16■□□□□ 0.5
HLA-DQB1-202ENST00000399079 NTSR2O95665 410 aa18.16■□□□□ 0.5
HLA-DQB1-202ENST00000399079 SRGNP10124 158 aa18.16■□□□□ 0.5
HLA-DQB1-202ENST00000399079 COL11A2P13942 1736 aaPredicted RBP18.16■□□□□ 0.5
HLA-DQB1-202ENST00000399079 PARP10Q53GL7 1025 aa18.15■□□□□ 0.5
HLA-DQB1-202ENST00000399079 HSP90AB3PQ58FF7 597 aa18.15■□□□□ 0.5
HLA-DQB1-202ENST00000399079 NLRP10Q86W26 655 aa18.15■□□□□ 0.5
HLA-DQB1-202ENST00000399079 MYH16Q9H6N6 1097 aa18.15■□□□□ 0.5
HLA-DQB1-202ENST00000399079 DLEC1Q9Y238 1755 aa18.14■□□□□ 0.49
HLA-DQB1-202ENST00000399079 KLRG2A4D1S0 409 aaPredicted RBP18.14■□□□□ 0.49
HLA-DQB1-202ENST00000399079 ATP5J2-PTCD1G3V325 749 aa18.14■□□□□ 0.49
HLA-DQB1-202ENST00000399079 VAMP4O75379 141 aa18.14■□□□□ 0.49
HLA-DQB1-202ENST00000399079 PPP1R42Q7Z4L9 355 aa18.14■□□□□ 0.49
HLA-DQB1-202ENST00000399079 CHMP4AQ9BY43 222 aa18.14■□□□□ 0.49
HLA-DQB1-202ENST00000399079 PDZRN3Q9UPQ7 1066 aa18.14■□□□□ 0.49
HLA-DQB1-202ENST00000399079 RIC3Q7Z5B4 369 aa18.13■□□□□ 0.49
HLA-DQB1-202ENST00000399079 SYNE4Q8N205 404 aa18.13■□□□□ 0.49
HLA-DQB1-202ENST00000399079 UTP14AQ9BVJ6 771 aaKnown RBP18.13■□□□□ 0.49
HLA-DQB1-202ENST00000399079 STK31Q9BXU1 1019 aa18.13■□□□□ 0.49
HLA-DQB1-202ENST00000399079 ZNF219Q9P2Y4 722 aaPredicted RBP18.13■□□□□ 0.49
HLA-DQB1-202ENST00000399079 SLC4A2P04920 1241 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms