RNA–Protein interactions for RNA: ENST00000398559.6

TMF1-201, Transcript of TATA element modulatory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMF1, Length 6,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMF1-201ENST00000398559 TBC1D32Q96NH3 1257 aa13.61□□□□□ -0.23
TMF1-201ENST00000398559 LRSAM1Q6UWE0 723 aa13.61□□□□□ -0.23
TMF1-201ENST00000398559 CCDC12Q8WUD4 166 aaPredicted RBP13.61□□□□□ -0.23
TMF1-201ENST00000398559 RAB34Q9BZG1 259 aa13.61□□□□□ -0.23
TMF1-201ENST00000398559 IGHDP01880 384 aa13.6□□□□□ -0.23
TMF1-201ENST00000398559 NF2P35240 595 aa13.6□□□□□ -0.23
TMF1-201ENST00000398559 MAP3K12Q12852 859 aa13.6□□□□□ -0.23
TMF1-201ENST00000398559 IPO4Q8TEX9 1081 aaKnown RBP13.6□□□□□ -0.23
TMF1-201ENST00000398559 NUTM2BA6NNL0 878 aaPredicted RBP13.6□□□□□ -0.23
TMF1-201ENST00000398559 NUTM2EB1AL46 878 aaPredicted RBP13.6□□□□□ -0.23
TMF1-201ENST00000398559 LIG1P18858 919 aa13.6□□□□□ -0.23
TMF1-201ENST00000398559 IQCA1Q86XH1 822 aa13.6□□□□□ -0.23
TMF1-201ENST00000398559 NUTM2AQ8IVF1 878 aaPredicted RBP13.6□□□□□ -0.23
TMF1-201ENST00000398559 THEMISQ8N1K5 641 aaPredicted RBP13.6□□□□□ -0.23
TMF1-201ENST00000398559 HCLS1P14317 486 aaPredicted RBP13.6□□□□□ -0.23
TMF1-201ENST00000398559 PANK2Q9BZ23 570 aa13.6□□□□□ -0.23
TMF1-201ENST00000398559 CCDC194A0A1B0GVG4 234 aa13.6□□□□□ -0.23
TMF1-201ENST00000398559 GNG11P61952 73 aa13.6□□□□□ -0.23
TMF1-201ENST00000398559 GRIN2BQ13224 1484 aa13.6□□□□□ -0.23
TMF1-201ENST00000398559 BMP2KLQ5H9B9 411 aa13.6□□□□□ -0.23
TMF1-201ENST00000398559 PHF23Q9BUL5 403 aaPredicted RBP13.59□□□□□ -0.23
TMF1-201ENST00000398559 JADE2Q9NQC1 790 aa13.59□□□□□ -0.23
TMF1-201ENST00000398559 PRDM11Q9NQV5 511 aa13.59□□□□□ -0.23
TMF1-201ENST00000398559 STAMBPO95630 424 aa13.59□□□□□ -0.23
TMF1-201ENST00000398559 USHBP1Q8N6Y0 703 aa13.59□□□□□ -0.23
TMF1-201ENST00000398559 DNAAF4Q8WXU2 420 aa13.59□□□□□ -0.23
TMF1-201ENST00000398559 TAOK3Q9H2K8 898 aa13.59□□□□□ -0.23
TMF1-201ENST00000398559 ZC3H6P61129 1189 aaKnown RBP13.59□□□□□ -0.23
TMF1-201ENST00000398559 HOOK3Q86VS8 718 aa13.59□□□□□ -0.23
TMF1-201ENST00000398559 TRIM21P19474 475 aaKnown RBP13.59□□□□□ -0.23
TMF1-201ENST00000398559 PRPF4BQ13523 1007 aaKnown RBP13.59□□□□□ -0.23
TMF1-201ENST00000398559 TSHZ3Q63HK5 1081 aa13.59□□□□□ -0.23
TMF1-201ENST00000398559 PTCD1O75127 700 aaKnown RBP13.59□□□□□ -0.23
TMF1-201ENST00000398559 ZNF444Q8N0Y2 327 aaPredicted RBP13.59□□□□□ -0.23
TMF1-201ENST00000398559 PTPRCP08575 1304 aa13.59□□□□□ -0.23
TMF1-201ENST00000398559 TTC22Q5TAA0 569 aa13.59□□□□□ -0.23
TMF1-201ENST00000398559 USP16Q9Y5T5 823 aa13.59□□□□□ -0.23
TMF1-201ENST00000398559 IFIT5Q13325 482 aaKnown RBP13.58□□□□□ -0.23
TMF1-201ENST00000398559 CATIPQ7Z7H3 387 aa13.58□□□□□ -0.23
TMF1-201ENST00000398559 DZIP1Q86YF9 867 aaKnown RBP13.58□□□□□ -0.23
TMF1-201ENST00000398559 CRACR2BQ8N4Y2 399 aaPredicted RBP13.58□□□□□ -0.23
TMF1-201ENST00000398559 A0A087WZG4 1122 aa13.58□□□□□ -0.24
TMF1-201ENST00000398559 PPFIA3O75145 1194 aa13.58□□□□□ -0.24
TMF1-201ENST00000398559 CCDC96Q2M329 555 aa13.58□□□□□ -0.24
TMF1-201ENST00000398559 CEP63Q96MT8 703 aa13.58□□□□□ -0.24
TMF1-201ENST00000398559 CCDC171Q6TFL3 1326 aa13.58□□□□□ -0.24
TMF1-201ENST00000398559 TROQ12816 1431 aaPredicted RBP13.58□□□□□ -0.24
TMF1-201ENST00000398559 NOP2P46087 812 aaKnown RBP13.58□□□□□ -0.24
TMF1-201ENST00000398559 GIGYF2Q6Y7W6 1299 aaKnown RBP13.58□□□□□ -0.24
TMF1-201ENST00000398559 CCDC97Q96F63 343 aaPredicted RBP13.58□□□□□ -0.24
TMF1-201ENST00000398559 CCDC40Q4G0X9 1142 aa13.58□□□□□ -0.24
TMF1-201ENST00000398559 KIF20AO95235 890 aa13.57□□□□□ -0.24
TMF1-201ENST00000398559 RAB11FIP4Q86YS3 637 aa13.57□□□□□ -0.24
TMF1-201ENST00000398559 RNF41Q9H4P4 317 aaPredicted RBP13.57□□□□□ -0.24
TMF1-201ENST00000398559 SLC5A1P13866 664 aa13.57□□□□□ -0.24
TMF1-201ENST00000398559 HSF2BPO75031 334 aa13.57□□□□□ -0.24
TMF1-201ENST00000398559 SPTY2D1Q68D10 685 aaPredicted RBP13.57□□□□□ -0.24
TMF1-201ENST00000398559 CALML4Q96GE6 196 aa13.57□□□□□ -0.24
TMF1-201ENST00000398559 CCDC61Q9Y6R9 512 aa13.57□□□□□ -0.24
TMF1-201ENST00000398559 CTNNA2P26232 953 aa13.57□□□□□ -0.24
TMF1-201ENST00000398559 NEK1Q96PY6 1258 aa13.57□□□□□ -0.24
TMF1-201ENST00000398559 GOLIM4O00461 696 aa13.56□□□□□ -0.24
TMF1-201ENST00000398559 IARSP41252 1262 aaKnown RBP13.56□□□□□ -0.24
TMF1-201ENST00000398559 TMEM67Q5HYA8 995 aa13.56□□□□□ -0.24
TMF1-201ENST00000398559 FAM114A1Q8IWE2 563 aa13.56□□□□□ -0.24
TMF1-201ENST00000398559 KRT222Q8N1A0 295 aa13.56□□□□□ -0.24
TMF1-201ENST00000398559 ECHDC1Q9NTX5 307 aa13.56□□□□□ -0.24
TMF1-201ENST00000398559 ZSCAN22P10073 491 aaPredicted RBP13.56□□□□□ -0.24
TMF1-201ENST00000398559 ANO6Q4KMQ2 910 aa13.56□□□□□ -0.24
TMF1-201ENST00000398559 PPP4R3AQ6IN85 833 aa13.56□□□□□ -0.24
TMF1-201ENST00000398559 TIGD1Q96MW7 591 aa13.56□□□□□ -0.24
TMF1-201ENST00000398559 AMPD3Q01432 767 aa13.56□□□□□ -0.24
TMF1-201ENST00000398559 ORC3Q9UBD5 711 aaPredicted RBP13.56□□□□□ -0.24
TMF1-201ENST00000398559 CNPY2Q9Y2B0 182 aa13.56□□□□□ -0.24
TMF1-201ENST00000398559 NOLC1Q14978 699 aaKnown RBP eCLIP13.56□□□□□ -0.24
TMF1-201ENST00000398559 TCERG1LQ5VWI1 586 aa13.56□□□□□ -0.24
TMF1-201ENST00000398559 SPECC1LQ69YQ0 1117 aa13.56□□□□□ -0.24
TMF1-201ENST00000398559 WAPLQ7Z5K2 1190 aa13.56□□□□□ -0.24
TMF1-201ENST00000398559 TMOD2Q9NZR1 351 aa13.56□□□□□ -0.24
TMF1-201ENST00000398559 CCDC102BQ68D86 513 aa13.56□□□□□ -0.24
TMF1-201ENST00000398559 TMX3Q96JJ7 454 aa13.56□□□□□ -0.24
TMF1-201ENST00000398559 DHX29Q7Z478 1369 aaKnown RBP13.56□□□□□ -0.24
TMF1-201ENST00000398559 UBASH3AP57075 661 aa13.56□□□□□ -0.24
TMF1-201ENST00000398559 KANK3Q6NY19 840 aa13.56□□□□□ -0.24
TMF1-201ENST00000398559 NME9Q86XW9 330 aa13.56□□□□□ -0.24
TMF1-201ENST00000398559 CUL5Q93034 780 aa13.56□□□□□ -0.24
TMF1-201ENST00000398559 HAND2P61296 217 aa13.55□□□□□ -0.24
TMF1-201ENST00000398559 KCNH5Q8NCM2 988 aa13.55□□□□□ -0.24
TMF1-201ENST00000398559 NAIPQ13075 1403 aa13.55□□□□□ -0.24
TMF1-201ENST00000398559 METAP2P50579 478 aaKnown RBP eCLIP13.55□□□□□ -0.24
TMF1-201ENST00000398559 CEP112Q8N8E3 955 aa13.55□□□□□ -0.24
TMF1-201ENST00000398559 TCP11L1Q9NUJ3 509 aa13.55□□□□□ -0.24
TMF1-201ENST00000398559 FLIIQ13045 1269 aa13.55□□□□□ -0.24
TMF1-201ENST00000398559 MYO1BO43795 1136 aa13.55□□□□□ -0.24
TMF1-201ENST00000398559 SLC26A6Q9BXS9 759 aa13.55□□□□□ -0.24
TMF1-201ENST00000398559 TMOD3Q9NYL9 352 aa13.55□□□□□ -0.24
TMF1-201ENST00000398559 ANKIB1Q9P2G1 1089 aa13.55□□□□□ -0.24
TMF1-201ENST00000398559 ZNF652Q9Y2D9 606 aa13.55□□□□□ -0.24
TMF1-201ENST00000398559 EMILIN1Q9Y6C2 1016 aa13.55□□□□□ -0.24
TMF1-201ENST00000398559 ATP2C2O75185 946 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms