RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 NBPF15Q8N660 670 aa16.12■□□□□ 0.17
TFF3-202ENST00000398431 CNBD1Q8NA66 436 aa16.12■□□□□ 0.17
TFF3-202ENST00000398431 C7orf43Q8WVR3 580 aa16.12■□□□□ 0.17
TFF3-202ENST00000398431 TIAM2Q8IVF5 1701 aa16.11■□□□□ 0.17
TFF3-202ENST00000398431 SNRPA1P09661 255 aaKnown RBP16.11■□□□□ 0.17
TFF3-202ENST00000398431 U2AF1L5P0DN76 240 aaPredicted RBP16.11■□□□□ 0.17
TFF3-202ENST00000398431 U2AF1Q01081 240 aaKnown RBP eCLIP16.11■□□□□ 0.17
TFF3-202ENST00000398431 ERFEQ4G0M1 354 aa16.11■□□□□ 0.17
TFF3-202ENST00000398431 DPY19L2Q6NUT2 758 aa16.11■□□□□ 0.17
TFF3-202ENST00000398431 CLEC4GQ6UXB4 293 aa16.11■□□□□ 0.17
TFF3-202ENST00000398431 CNKSR1Q969H4 720 aa16.11■□□□□ 0.17
TFF3-202ENST00000398431 NUDCQ9Y266 331 aa16.11■□□□□ 0.17
TFF3-202ENST00000398431 LTBP3Q9NS15 1303 aa16.11■□□□□ 0.17
TFF3-202ENST00000398431 COL13A1Q5TAT6 717 aaPredicted RBP16.1■□□□□ 0.17
TFF3-202ENST00000398431 PRPF40BQ6NWY9 871 aaKnown RBP16.1■□□□□ 0.17
TFF3-202ENST00000398431 NPM2Q86SE8 214 aaKnown RBP16.1■□□□□ 0.17
TFF3-202ENST00000398431 MASTLQ96GX5 879 aa16.1■□□□□ 0.17
TFF3-202ENST00000398431 BCORQ6W2J9 1755 aa16.1■□□□□ 0.17
TFF3-202ENST00000398431 KLRG2A4D1S0 409 aaPredicted RBP16.09■□□□□ 0.17
TFF3-202ENST00000398431 HTATSF1O43719 755 aaKnown RBP16.08■□□□□ 0.16
TFF3-202ENST00000398431 DDNO94850 711 aaPredicted RBP16.08■□□□□ 0.16
TFF3-202ENST00000398431 ST5P78524 1137 aa16.08■□□□□ 0.16
TFF3-202ENST00000398431 RTF1Q92541 710 aaKnown RBP16.08■□□□□ 0.16
TFF3-202ENST00000398431 TAOK3Q9H2K8 898 aa16.08■□□□□ 0.16
TFF3-202ENST00000398431 TAF7Q15545 349 aaPredicted RBP16.07■□□□□ 0.16
TFF3-202ENST00000398431 NBPF5PQ86XG9 351 aaPredicted RBP16.07■□□□□ 0.16
TFF3-202ENST00000398431 MIS18AQ9NYP9 233 aa16.07■□□□□ 0.16
TFF3-202ENST00000398431 CACNA1SQ13698 1873 aa16.06■□□□□ 0.16
TFF3-202ENST00000398431 RGL2O15211 777 aa16.06■□□□□ 0.16
TFF3-202ENST00000398431 NPHP1O15259 732 aa16.06■□□□□ 0.16
TFF3-202ENST00000398431 POTEIP0CG38 1075 aa16.06■□□□□ 0.16
TFF3-202ENST00000398431 POTEJP0CG39 1038 aa16.06■□□□□ 0.16
TFF3-202ENST00000398431 HLFQ16534 295 aa16.06■□□□□ 0.16
TFF3-202ENST00000398431 ARFGEF2Q9Y6D5 1785 aa16.05■□□□□ 0.16
TFF3-202ENST00000398431 NPR1P16066 1061 aa16.05■□□□□ 0.16
TFF3-202ENST00000398431 TPTE2Q6XPS3 522 aa16.05■□□□□ 0.16
TFF3-202ENST00000398431 NIP7Q9Y221 180 aaKnown RBP eCLIP16.05■□□□□ 0.16
TFF3-202ENST00000398431 SOGA3Q5TF21 947 aa16.04■□□□□ 0.16
TFF3-202ENST00000398431 OLFM4Q6UX06 510 aa16.04■□□□□ 0.16
TFF3-202ENST00000398431 ZNF652Q9Y2D9 606 aa16.04■□□□□ 0.16
TFF3-202ENST00000398431 CHADLQ6NUI6 762 aa16.03■□□□□ 0.16
TFF3-202ENST00000398431 FAM177BA6PVY3 158 aa16.02■□□□□ 0.16
TFF3-202ENST00000398431 CCDC93Q567U6 631 aa16.02■□□□□ 0.16
TFF3-202ENST00000398431 PLEKHF1Q96S99 279 aa16.02■□□□□ 0.16
TFF3-202ENST00000398431 HSPA1AP0DMV8 641 aaKnown RBP16.01■□□□□ 0.15
TFF3-202ENST00000398431 HSPA1BP0DMV9 641 aaKnown RBP16.01■□□□□ 0.15
TFF3-202ENST00000398431 FKBP4Q02790 459 aaKnown RBP eCLIP16.01■□□□□ 0.15
TFF3-202ENST00000398431 L3MBTL3Q96JM7 780 aaPredicted RBP16.01■□□□□ 0.15
TFF3-202ENST00000398431 EIF4A1P60842 406 aaKnown RBP16■□□□□ 0.15
TFF3-202ENST00000398431 TAF1DQ9H5J8 278 aaPredicted RBP16■□□□□ 0.15
TFF3-202ENST00000398431 ZNF277Q9NRM2 450 aaPredicted RBP16■□□□□ 0.15
TFF3-202ENST00000398431 DLG5Q8TDM6 1919 aa16■□□□□ 0.15
TFF3-202ENST00000398431 PASKQ96RG2 1323 aa15.99■□□□□ 0.15
TFF3-202ENST00000398431 ERVV-1B6SEH8 477 aa15.99■□□□□ 0.15
TFF3-202ENST00000398431 TTLL7Q6ZT98 887 aa15.99■□□□□ 0.15
TFF3-202ENST00000398431 NGEFQ8N5V2 710 aa15.99■□□□□ 0.15
TFF3-202ENST00000398431 THUMPD2Q9BTF0 503 aaKnown RBP15.99■□□□□ 0.15
TFF3-202ENST00000398431 CREBZFQ9NS37 354 aa15.99■□□□□ 0.15
TFF3-202ENST00000398431 PCNTO95613 3336 aa15.99■□□□□ 0.15
TFF3-202ENST00000398431 ZNF541Q9H0D2 1346 aa15.98■□□□□ 0.15
TFF3-202ENST00000398431 ITGBL1O95965 494 aaPredicted RBP15.98■□□□□ 0.15
TFF3-202ENST00000398431 ALDH1B1P30837 517 aa15.98■□□□□ 0.15
TFF3-202ENST00000398431 CRY2Q49AN0 593 aa15.98■□□□□ 0.15
TFF3-202ENST00000398431 NUTM1Q86Y26 1132 aa15.98■□□□□ 0.15
TFF3-202ENST00000398431 RTKN2Q8IZC4 609 aa15.98■□□□□ 0.15
TFF3-202ENST00000398431 SYNE4Q8N205 404 aa15.98■□□□□ 0.15
TFF3-202ENST00000398431 SNED1Q8TER0 1413 aa15.98■□□□□ 0.15
TFF3-202ENST00000398431 PNISRQ8TF01 805 aaKnown RBP15.98■□□□□ 0.15
TFF3-202ENST00000398431 SCN4AP35499 1836 aa15.97■□□□□ 0.15
TFF3-202ENST00000398431 NUP98P52948 1817 aa15.97■□□□□ 0.15
TFF3-202ENST00000398431 IQCA1LA6NCM1 817 aa15.97■□□□□ 0.15
TFF3-202ENST00000398431 FZD9O00144 591 aa15.97■□□□□ 0.15
TFF3-202ENST00000398431 LDHDQ86WU2 507 aa15.97■□□□□ 0.15
TFF3-202ENST00000398431 RRP7AQ9Y3A4 280 aaKnown RBP15.97■□□□□ 0.15
TFF3-202ENST00000398431 MAP3K15Q6ZN16 1313 aa15.96■□□□□ 0.15
TFF3-202ENST00000398431 KDM3BQ7LBC6 1761 aa15.96■□□□□ 0.15
TFF3-202ENST00000398431 GTF2E1P29083 439 aaPredicted RBP15.96■□□□□ 0.15
TFF3-202ENST00000398431 IARSP41252 1262 aaKnown RBP15.96■□□□□ 0.15
TFF3-202ENST00000398431 NFE2L2Q16236 605 aa15.96■□□□□ 0.15
TFF3-202ENST00000398431 TNS4Q8IZW8 715 aa15.96■□□□□ 0.15
TFF3-202ENST00000398431 MKRN1Q9UHC7 482 aaKnown RBP15.96■□□□□ 0.15
TFF3-202ENST00000398431 ABCC12Q96J65 1359 aa15.96■□□□□ 0.15
TFF3-202ENST00000398431 UBN2Q6ZU65 1347 aa15.95■□□□□ 0.14
TFF3-202ENST00000398431 LAMB4A4D0S4 1761 aa15.95■□□□□ 0.14
TFF3-202ENST00000398431 SUSD4Q5VX71 490 aa15.95■□□□□ 0.14
TFF3-202ENST00000398431 ZNF34Q8IZ26 560 aa15.95■□□□□ 0.14
TFF3-202ENST00000398431 MYL6BP14649 208 aa15.94■□□□□ 0.14
TFF3-202ENST00000398431 GPTP24298 496 aa15.94■□□□□ 0.14
TFF3-202ENST00000398431 HOXA10P31260 410 aaPredicted RBP15.94■□□□□ 0.14
TFF3-202ENST00000398431 LRP10Q7Z4F1 713 aa15.94■□□□□ 0.14
TFF3-202ENST00000398431 SLC51AQ86UW1 340 aa15.94■□□□□ 0.14
TFF3-202ENST00000398431 PSMD1Q99460 953 aa15.94■□□□□ 0.14
TFF3-202ENST00000398431 NYXQ9GZU5 481 aa15.94■□□□□ 0.14
TFF3-202ENST00000398431 HACL1Q9UJ83 578 aa15.94■□□□□ 0.14
TFF3-202ENST00000398431 EPHX2P34913 555 aa15.93■□□□□ 0.14
TFF3-202ENST00000398431 ZBTB3Q9H5J0 574 aa15.93■□□□□ 0.14
TFF3-202ENST00000398431 ADAMTSL1Q8N6G6 1762 aa15.92■□□□□ 0.14
TFF3-202ENST00000398431 COL4A5P29400 1685 aa15.92■□□□□ 0.14
TFF3-202ENST00000398431 CNTNAP1P78357 1384 aa15.92■□□□□ 0.14
TFF3-202ENST00000398431 CAPN15O75808 1086 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms