RNA–Protein interactions for RNA: ENST00000398399.6

VGLL3-202, Transcript of vestigial like family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VGLL3, Length 10,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL3-202ENST00000398399 ATAD2BQ9ULI0 1458 aa15.78■□□□□ 0.12
VGLL3-202ENST00000398399 GRIPAP1Q4V328 841 aa15.78■□□□□ 0.12
VGLL3-202ENST00000398399 HMG20BQ9P0W2 317 aa15.78■□□□□ 0.12
VGLL3-202ENST00000398399 NESP48681 1621 aa15.78■□□□□ 0.12
VGLL3-202ENST00000398399 ARAP1Q96P48 1450 aa15.78■□□□□ 0.12
VGLL3-202ENST00000398399 KLHL10Q6JEL2 608 aa15.78■□□□□ 0.12
VGLL3-202ENST00000398399 RMND1Q9NWS8 449 aa15.78■□□□□ 0.12
VGLL3-202ENST00000398399 NOLC1Q14978 699 aaKnown RBP eCLIP15.77■□□□□ 0.12
VGLL3-202ENST00000398399 GNG11P61952 73 aa15.77■□□□□ 0.12
VGLL3-202ENST00000398399 SYTL4Q96C24 671 aaPredicted RBP15.77■□□□□ 0.12
VGLL3-202ENST00000398399 TRMT1Q9NXH9 659 aaKnown RBP15.77■□□□□ 0.12
VGLL3-202ENST00000398399 SH2D4BQ5SQS7 431 aa15.77■□□□□ 0.12
VGLL3-202ENST00000398399 NUTM2FA1L443 756 aa15.77■□□□□ 0.12
VGLL3-202ENST00000398399 HDXQ7Z353 690 aa15.77■□□□□ 0.12
VGLL3-202ENST00000398399 SMC6Q96SB8 1091 aa15.77■□□□□ 0.12
VGLL3-202ENST00000398399 MAP3K1Q13233 1512 aa15.77■□□□□ 0.11
VGLL3-202ENST00000398399 MATR3P43243 847 aaKnown RBP eCLIP15.77■□□□□ 0.11
VGLL3-202ENST00000398399 ZKSCAN5Q9Y2L8 839 aa15.77■□□□□ 0.11
VGLL3-202ENST00000398399 MSH5O43196 834 aa15.77■□□□□ 0.11
VGLL3-202ENST00000398399 SARNPP82979 210 aaKnown RBP15.77■□□□□ 0.11
VGLL3-202ENST00000398399 PPP1R14CQ8TAE6 165 aa15.77■□□□□ 0.11
VGLL3-202ENST00000398399 TBC1D32Q96NH3 1257 aa15.77■□□□□ 0.11
VGLL3-202ENST00000398399 JAKMIP2Q96AA8 810 aa15.77■□□□□ 0.11
VGLL3-202ENST00000398399 CTNNA2P26232 953 aa15.76■□□□□ 0.11
VGLL3-202ENST00000398399 CEP57Q86XR8 500 aa15.76■□□□□ 0.11
VGLL3-202ENST00000398399 FAM200AQ8TCP9 573 aa15.76■□□□□ 0.11
VGLL3-202ENST00000398399 IQCGQ9H095 443 aaKnown RBP15.76■□□□□ 0.11
VGLL3-202ENST00000398399 POLR1AO95602 1720 aaPredicted RBP15.76■□□□□ 0.11
VGLL3-202ENST00000398399 BAG4O95429 457 aaKnown RBP15.76■□□□□ 0.11
VGLL3-202ENST00000398399 NBPF11Q86T75 865 aa15.76■□□□□ 0.11
VGLL3-202ENST00000398399 C11orf95C9JLR9 678 aaPredicted RBP15.76■□□□□ 0.11
VGLL3-202ENST00000398399 MYH6P13533 1939 aa15.76■□□□□ 0.11
VGLL3-202ENST00000398399 SLU7O95391 586 aaKnown RBP15.76■□□□□ 0.11
VGLL3-202ENST00000398399 CTAGE15A4D2H0 777 aa15.76■□□□□ 0.11
VGLL3-202ENST00000398399 CTAGE8P0CG41 777 aa15.76■□□□□ 0.11
VGLL3-202ENST00000398399 CTAGE6Q86UF2 777 aa15.76■□□□□ 0.11
VGLL3-202ENST00000398399 CTAGE4Q8IX94 777 aa15.76■□□□□ 0.11
VGLL3-202ENST00000398399 HOMER2Q9NSB8 354 aa15.76■□□□□ 0.11
VGLL3-202ENST00000398399 CLGNO14967 610 aa15.76■□□□□ 0.11
VGLL3-202ENST00000398399 CTNNBL1Q8WYA6 563 aaPredicted RBP15.76■□□□□ 0.11
VGLL3-202ENST00000398399 TRERF1Q96PN7 1200 aa15.76■□□□□ 0.11
VGLL3-202ENST00000398399 EPRSP07814 1512 aaKnown RBP15.76■□□□□ 0.11
VGLL3-202ENST00000398399 KIAA0753Q2KHM9 967 aa15.76■□□□□ 0.11
VGLL3-202ENST00000398399 TMCO5BA8MYB1 307 aa15.76■□□□□ 0.11
VGLL3-202ENST00000398399 ATP11AP98196 1134 aa15.76■□□□□ 0.11
VGLL3-202ENST00000398399 TTC21AQ8NDW8 1320 aa15.75■□□□□ 0.11
VGLL3-202ENST00000398399 CCDC129Q6ZRS4 1044 aa15.75■□□□□ 0.11
VGLL3-202ENST00000398399 SSBP05455 408 aaKnown RBP eCLIP15.75■□□□□ 0.11
VGLL3-202ENST00000398399 PTPRGP23470 1445 aa15.75■□□□□ 0.11
VGLL3-202ENST00000398399 KAT6AQ92794 2004 aa15.75■□□□□ 0.11
VGLL3-202ENST00000398399 MCM6Q14566 821 aa15.75■□□□□ 0.11
VGLL3-202ENST00000398399 CEP128Q6ZU80 1094 aa15.75■□□□□ 0.11
VGLL3-202ENST00000398399 FSIP1Q8NA03 581 aa15.75■□□□□ 0.11
VGLL3-202ENST00000398399 FAM76AQ8TAV0 307 aa15.75■□□□□ 0.11
VGLL3-202ENST00000398399 LACTBP83111 547 aaPredicted RBP15.75■□□□□ 0.11
VGLL3-202ENST00000398399 SCLT1Q96NL6 688 aa15.75■□□□□ 0.11
VGLL3-202ENST00000398399 GABPB1Q06547 395 aaPredicted RBP15.74■□□□□ 0.11
VGLL3-202ENST00000398399 PPP4R3AQ6IN85 833 aa15.74■□□□□ 0.11
VGLL3-202ENST00000398399 USH1CQ9Y6N9 552 aa15.74■□□□□ 0.11
VGLL3-202ENST00000398399 CCDC96Q2M329 555 aa15.74■□□□□ 0.11
VGLL3-202ENST00000398399 CKAP2LQ8IYA6 745 aa15.74■□□□□ 0.11
VGLL3-202ENST00000398399 TSR2Q969E8 191 aaKnown RBP15.74■□□□□ 0.11
VGLL3-202ENST00000398399 IQGAP2Q13576 1575 aa15.74■□□□□ 0.11
VGLL3-202ENST00000398399 SAMD15Q9P1V8 674 aa15.74■□□□□ 0.11
VGLL3-202ENST00000398399 LIG1P18858 919 aa15.74■□□□□ 0.11
VGLL3-202ENST00000398399 CCDC160A6NGH7 325 aa15.74■□□□□ 0.11
VGLL3-202ENST00000398399 MPHOSPH8Q99549 860 aa15.74■□□□□ 0.11
VGLL3-202ENST00000398399 SKILP12757 684 aa15.74■□□□□ 0.11
VGLL3-202ENST00000398399 LRRC27Q9C0I9 530 aa15.74■□□□□ 0.11
VGLL3-202ENST00000398399 TERF1P54274 439 aa15.74■□□□□ 0.11
VGLL3-202ENST00000398399 FKBP4Q02790 459 aaKnown RBP eCLIP15.74■□□□□ 0.11
VGLL3-202ENST00000398399 TDRD12Q587J7 1177 aaKnown RBP15.74■□□□□ 0.11
VGLL3-202ENST00000398399 MTMR7Q9Y216 660 aa15.74■□□□□ 0.11
VGLL3-202ENST00000398399 AKAP2Q9Y2D5 859 aa15.74■□□□□ 0.11
VGLL3-202ENST00000398399 AIDAQ96BJ3 306 aa15.73■□□□□ 0.11
VGLL3-202ENST00000398399 ANAPC4Q9UJX5 808 aa15.73■□□□□ 0.11
VGLL3-202ENST00000398399 FMNL3Q8IVF7 1028 aa15.73■□□□□ 0.11
VGLL3-202ENST00000398399 MICALL1Q8N3F8 863 aa15.73■□□□□ 0.11
VGLL3-202ENST00000398399 STXBP4Q6ZWJ1 553 aa15.73■□□□□ 0.11
VGLL3-202ENST00000398399 BMP15O95972 392 aa15.73■□□□□ 0.11
VGLL3-202ENST00000398399 CCDC110Q8TBZ0 833 aa15.73■□□□□ 0.11
VGLL3-202ENST00000398399 CCDC77Q9BR77 488 aa15.73■□□□□ 0.11
VGLL3-202ENST00000398399 IBSPP21815 317 aaPredicted RBP15.73■□□□□ 0.11
VGLL3-202ENST00000398399 KDM4AO75164 1064 aa15.73■□□□□ 0.11
VGLL3-202ENST00000398399 CYLC1P35663 651 aaPredicted RBP15.73■□□□□ 0.11
VGLL3-202ENST00000398399 SLFN5Q08AF3 891 aa15.73■□□□□ 0.11
VGLL3-202ENST00000398399 ARFGAP2Q8N6H7 521 aa15.73■□□□□ 0.11
VGLL3-202ENST00000398399 PTPRCP08575 1304 aa15.73■□□□□ 0.11
VGLL3-202ENST00000398399 GBP1P32455 592 aa15.72■□□□□ 0.11
VGLL3-202ENST00000398399 ZNF76P36508 570 aa15.72■□□□□ 0.11
VGLL3-202ENST00000398399 KCNG4Q8TDN1 519 aa15.72■□□□□ 0.11
VGLL3-202ENST00000398399 TACC1O75410 805 aa15.72■□□□□ 0.11
VGLL3-202ENST00000398399 FCHSD2O94868 740 aa15.72■□□□□ 0.11
VGLL3-202ENST00000398399 ATP5DP30049 168 aa15.72■□□□□ 0.11
VGLL3-202ENST00000398399 TUBB2AQ13885 445 aa15.72■□□□□ 0.11
VGLL3-202ENST00000398399 TBC1D5Q92609 795 aa15.72■□□□□ 0.11
VGLL3-202ENST00000398399 TUBB2BQ9BVA1 445 aa15.72■□□□□ 0.11
VGLL3-202ENST00000398399 HMGB1P1B2RPK0 211 aaPredicted RBP15.72■□□□□ 0.11
VGLL3-202ENST00000398399 ZWINTO95229 277 aa15.72■□□□□ 0.11
VGLL3-202ENST00000398399 ATP2A1O14983 1001 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms