RNA–Protein interactions for RNA: ENST00000398339.5

TCF4-203, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-203ENST00000398339 RIOK3O14730 519 aaKnown RBP9.87□□□□□ -0.83
TCF4-203ENST00000398339 MAP4K4O95819 1239 aaPredicted RBP9.87□□□□□ -0.83
TCF4-203ENST00000398339 CHAF1AQ13111 956 aaPredicted RBP9.87□□□□□ -0.83
TCF4-203ENST00000398339 PDCL2Q8N4E4 241 aa9.87□□□□□ -0.83
TCF4-203ENST00000398339 PI4K2BQ8TCG2 481 aa9.87□□□□□ -0.83
TCF4-203ENST00000398339 LARP6Q9BRS8 491 aaKnown RBP9.87□□□□□ -0.83
TCF4-203ENST00000398339 MAP3K19Q56UN5 1328 aa9.87□□□□□ -0.83
TCF4-203ENST00000398339 ITSN1Q15811 1721 aa9.87□□□□□ -0.83
TCF4-203ENST00000398339 SPATA31D1Q6ZQQ2 1576 aa9.86□□□□□ -0.83
TCF4-203ENST00000398339 RAB11FIP3O75154 756 aa9.86□□□□□ -0.83
TCF4-203ENST00000398339 APPP05067 770 aa9.86□□□□□ -0.83
TCF4-203ENST00000398339 CCDC30Q5VVM6 783 aa9.86□□□□□ -0.83
TCF4-203ENST00000398339 SSH3Q8TE77 659 aa9.86□□□□□ -0.83
TCF4-203ENST00000398339 ANKRD7Q92527 254 aa9.86□□□□□ -0.83
TCF4-203ENST00000398339 MTMR6Q9Y217 621 aa9.86□□□□□ -0.83
TCF4-203ENST00000398339 XRN1Q8IZH2 1706 aaKnown RBP9.86□□□□□ -0.83
TCF4-203ENST00000398339 PEAK1Q9H792 1746 aa9.86□□□□□ -0.83
TCF4-203ENST00000398339 GOLGA6L6A8MZA4 724 aa9.86□□□□□ -0.83
TCF4-203ENST00000398339 DNM1Q05193 864 aaKnown RBP9.86□□□□□ -0.83
TCF4-203ENST00000398339 AXDND1Q5T1B0 1012 aaPredicted RBP9.86□□□□□ -0.83
TCF4-203ENST00000398339 SIRT1Q96EB6 747 aa9.86□□□□□ -0.83
TCF4-203ENST00000398339 USP44Q9H0E7 712 aa9.86□□□□□ -0.83
TCF4-203ENST00000398339 CTIFO43310 598 aaKnown RBP9.85□□□□□ -0.83
TCF4-203ENST00000398339 LARGE1O95461 756 aa9.85□□□□□ -0.83
TCF4-203ENST00000398339 HMGB1P09429 215 aaKnown RBP9.85□□□□□ -0.83
TCF4-203ENST00000398339 UBTFL1P0CB47 393 aaPredicted RBP9.85□□□□□ -0.83
TCF4-203ENST00000398339 CCDC192P0DO97 292 aa9.85□□□□□ -0.83
TCF4-203ENST00000398339 GJB2P29033 226 aa9.85□□□□□ -0.83
TCF4-203ENST00000398339 SPC24Q8NBT2 197 aa9.85□□□□□ -0.83
TCF4-203ENST00000398339 NRXN3Q9Y4C0 1643 aa9.85□□□□□ -0.83
TCF4-203ENST00000398339 CCDC83Q8IWF9 413 aa9.85□□□□□ -0.83
TCF4-203ENST00000398339 CNTROBQ8N137 903 aa9.85□□□□□ -0.83
TCF4-203ENST00000398339 HYPKQ9NX55 129 aa9.85□□□□□ -0.83
TCF4-203ENST00000398339 PXDNLA1KZ92 1463 aa9.84□□□□□ -0.83
TCF4-203ENST00000398339 USP31Q70CQ4 1352 aa9.84□□□□□ -0.83
TCF4-203ENST00000398339 SURF6O75683 361 aaKnown RBP9.84□□□□□ -0.83
TCF4-203ENST00000398339 CASTP20810 708 aaKnown RBP9.84□□□□□ -0.83
TCF4-203ENST00000398339 POLA2Q14181 598 aa9.84□□□□□ -0.83
TCF4-203ENST00000398339 RHPN1Q8TCX5 695 aa9.84□□□□□ -0.83
TCF4-203ENST00000398339 NECTIN2Q92692 538 aa9.84□□□□□ -0.83
TCF4-203ENST00000398339 FAM208AQ9UK61 1670 aaKnown RBP9.84□□□□□ -0.83
TCF4-203ENST00000398339 TECPR2O15040 1411 aa9.84□□□□□ -0.83
TCF4-203ENST00000398339 CPA1P15085 419 aa9.84□□□□□ -0.83
TCF4-203ENST00000398339 FAM200AQ8TCP9 573 aa9.84□□□□□ -0.83
TCF4-203ENST00000398339 SPDYE4A6NLX3 237 aa9.83□□□□□ -0.84
TCF4-203ENST00000398339 VPS53Q5VIR6 699 aa9.83□□□□□ -0.84
TCF4-203ENST00000398339 TAF3Q5VWG9 929 aa9.83□□□□□ -0.84
TCF4-203ENST00000398339 PPP1R42Q7Z4L9 355 aa9.83□□□□□ -0.84
TCF4-203ENST00000398339 ZSCAN31Q96LW9 406 aaPredicted RBP9.83□□□□□ -0.84
TCF4-203ENST00000398339 PDRG1Q9NUG6 133 aa9.83□□□□□ -0.84
TCF4-203ENST00000398339 ACEP12821 1306 aa9.83□□□□□ -0.84
TCF4-203ENST00000398339 SOX12O15370 315 aa9.83□□□□□ -0.84
TCF4-203ENST00000398339 PTGS1P23219 599 aa9.83□□□□□ -0.84
TCF4-203ENST00000398339 CWC27Q6UX04 472 aaKnown RBP9.83□□□□□ -0.84
TCF4-203ENST00000398339 KIF1BPQ96EK5 621 aa9.83□□□□□ -0.84
TCF4-203ENST00000398339 SH2B1Q9NRF2 756 aaPredicted RBP9.83□□□□□ -0.84
TCF4-203ENST00000398339 SPG7Q9UQ90 795 aa9.83□□□□□ -0.84
TCF4-203ENST00000398339 KDRP35968 1356 aa9.83□□□□□ -0.84
TCF4-203ENST00000398339 HTATSF1O43719 755 aaKnown RBP9.82□□□□□ -0.84
TCF4-203ENST00000398339 U2AF2P26368 475 aaKnown RBP eCLIP9.82□□□□□ -0.84
TCF4-203ENST00000398339 MRVI1Q9Y6F6 885 aa9.82□□□□□ -0.84
TCF4-203ENST00000398339 NALCNQ8IZF0 1738 aa9.82□□□□□ -0.84
TCF4-203ENST00000398339 RIMS1Q86UR5 1692 aaKnown RBP9.82□□□□□ -0.84
TCF4-203ENST00000398339 N4BP2Q86UW6 1770 aaPredicted RBP9.82□□□□□ -0.84
TCF4-203ENST00000398339 VPS37CA5D8V6 355 aaPredicted RBP9.82□□□□□ -0.84
TCF4-203ENST00000398339 ST3GAL1Q11201 340 aa9.82□□□□□ -0.84
TCF4-203ENST00000398339 MAP3K11Q16584 847 aa9.82□□□□□ -0.84
TCF4-203ENST00000398339 JAKMIP1Q96N16 626 aaKnown RBP9.82□□□□□ -0.84
TCF4-203ENST00000398339 TM6SF1Q9BZW5 370 aa9.82□□□□□ -0.84
TCF4-203ENST00000398339 ZSWIM6Q9HCJ5 1215 aa9.82□□□□□ -0.84
TCF4-203ENST00000398339 USP6P35125 1406 aa9.82□□□□□ -0.84
TCF4-203ENST00000398339 MAP3K5Q99683 1374 aa9.82□□□□□ -0.84
TCF4-203ENST00000398339 USP42Q9H9J4 1324 aaKnown RBP9.82□□□□□ -0.84
TCF4-203ENST00000398339 PLEKHG3A1L390 1219 aa9.81□□□□□ -0.84
TCF4-203ENST00000398339 DTNBO60941 627 aa9.81□□□□□ -0.84
TCF4-203ENST00000398339 TYRO3Q06418 890 aa9.81□□□□□ -0.84
TCF4-203ENST00000398339 ADCK5Q3MIX3 580 aa9.81□□□□□ -0.84
TCF4-203ENST00000398339 TTC6Q86TZ1 520 aa9.81□□□□□ -0.84
TCF4-203ENST00000398339 KCNB2Q92953 911 aa9.81□□□□□ -0.84
TCF4-203ENST00000398339 NUP62CLQ9H1M0 184 aa9.81□□□□□ -0.84
TCF4-203ENST00000398339 LRRC37A3O60309 1634 aa9.81□□□□□ -0.84
TCF4-203ENST00000398339 KRT85P78386 507 aa9.81□□□□□ -0.84
TCF4-203ENST00000398339 PTH1RQ03431 593 aa9.81□□□□□ -0.84
TCF4-203ENST00000398339 SYCP1Q15431 976 aa9.81□□□□□ -0.84
TCF4-203ENST00000398339 RUFY2Q8WXA3 655 aa9.81□□□□□ -0.84
TCF4-203ENST00000398339 FEZ1Q99689 392 aa9.81□□□□□ -0.84
TCF4-203ENST00000398339 CYP46A1Q9Y6A2 500 aa9.81□□□□□ -0.84
TCF4-203ENST00000398339 ELP1O95163 1332 aa9.81□□□□□ -0.84
TCF4-203ENST00000398339 IGSF1Q8N6C5 1336 aa9.81□□□□□ -0.84
TCF4-203ENST00000398339 CRYBG1Q9Y4K1 1723 aa9.8□□□□□ -0.84
TCF4-203ENST00000398339 SRGAP3O43295 1099 aa9.8□□□□□ -0.84
TCF4-203ENST00000398339 LIG1P18858 919 aa9.8□□□□□ -0.84
TCF4-203ENST00000398339 SLC20A2Q08357 652 aa9.8□□□□□ -0.84
TCF4-203ENST00000398339 NCBP1Q09161 790 aaKnown RBP9.8□□□□□ -0.84
TCF4-203ENST00000398339 ME3Q16798 604 aa9.8□□□□□ -0.84
TCF4-203ENST00000398339 PRPF40BQ6NWY9 871 aaKnown RBP9.8□□□□□ -0.84
TCF4-203ENST00000398339 CCDC186Q7Z3E2 898 aa9.8□□□□□ -0.84
TCF4-203ENST00000398339 LUZP1Q86V48 1076 aa9.8□□□□□ -0.84
TCF4-203ENST00000398339 CERS3Q8IU89 383 aa9.8□□□□□ -0.84
TCF4-203ENST00000398339 EYA1Q99502 592 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms