RNA–Protein interactions for RNA: ENST00000397998.7

CSGALNACT1-202, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 3,962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-202ENST00000397998 ARGLU1Q9NWB6 273 aaPredicted RBP13.1□□□□□ -0.31
CSGALNACT1-202ENST00000397998 KIF24Q5T7B8 1368 aa13.1□□□□□ -0.31
CSGALNACT1-202ENST00000397998 PTCH1Q13635 1447 aa13.1□□□□□ -0.31
CSGALNACT1-202ENST00000397998 BCL2L12Q9HB09 334 aa13.1□□□□□ -0.31
CSGALNACT1-202ENST00000397998 CYP2E1P05181 493 aaPredicted RBP13.09□□□□□ -0.31
CSGALNACT1-202ENST00000397998 CUL4AQ13619 759 aa13.09□□□□□ -0.31
CSGALNACT1-202ENST00000397998 PDILTQ8N807 584 aa13.09□□□□□ -0.31
CSGALNACT1-202ENST00000397998 LRRC2Q9BYS8 371 aa13.09□□□□□ -0.31
CSGALNACT1-202ENST00000397998 NCOA3Q9Y6Q9 1424 aa13.09□□□□□ -0.31
CSGALNACT1-202ENST00000397998 CHMP4CQ96CF2 233 aa13.09□□□□□ -0.31
CSGALNACT1-202ENST00000397998 CCDC66A2RUB6 948 aa13.09□□□□□ -0.31
CSGALNACT1-202ENST00000397998 PDIA4P13667 645 aaKnown RBP13.09□□□□□ -0.31
CSGALNACT1-202ENST00000397998 TEX35Q5T0J7 233 aa13.09□□□□□ -0.31
CSGALNACT1-202ENST00000397998 RAD50Q92878 1312 aa13.09□□□□□ -0.31
CSGALNACT1-202ENST00000397998 ZFYVE16Q7Z3T8 1539 aa13.08□□□□□ -0.31
CSGALNACT1-202ENST00000397998 APPP05067 770 aa13.08□□□□□ -0.31
CSGALNACT1-202ENST00000397998 KRT32Q14532 448 aa13.08□□□□□ -0.31
CSGALNACT1-202ENST00000397998 MAP3K2Q9Y2U5 619 aa13.08□□□□□ -0.31
CSGALNACT1-202ENST00000397998 ABCA6Q8N139 1617 aa13.08□□□□□ -0.32
CSGALNACT1-202ENST00000397998 MAP3K19Q56UN5 1328 aa13.08□□□□□ -0.32
CSGALNACT1-202ENST00000397998 CCT2P78371 535 aaKnown RBP13.08□□□□□ -0.32
CSGALNACT1-202ENST00000397998 CEP135Q66GS9 1140 aa13.08□□□□□ -0.32
CSGALNACT1-202ENST00000397998 KIF18AQ8NI77 898 aa13.08□□□□□ -0.32
CSGALNACT1-202ENST00000397998 POGZQ7Z3K3 1410 aa13.08□□□□□ -0.32
CSGALNACT1-202ENST00000397998 RALYLQ86SE5 291 aaKnown RBP13.08□□□□□ -0.32
CSGALNACT1-202ENST00000397998 RASEFQ8IZ41 740 aa13.08□□□□□ -0.32
CSGALNACT1-202ENST00000397998 OSBPL3Q9H4L5 887 aa13.08□□□□□ -0.32
CSGALNACT1-202ENST00000397998 FAM135BQ49AJ0 1406 aa13.08□□□□□ -0.32
CSGALNACT1-202ENST00000397998 EDC4Q6P2E9 1401 aaKnown RBP13.08□□□□□ -0.32
CSGALNACT1-202ENST00000397998 CPLX2Q6PUV4 134 aaKnown RBP13.07□□□□□ -0.32
CSGALNACT1-202ENST00000397998 NBPF7P0C2Y1 421 aaPredicted RBP13.07□□□□□ -0.32
CSGALNACT1-202ENST00000397998 SPHKAPQ2M3C7 1700 aa13.07□□□□□ -0.32
CSGALNACT1-202ENST00000397998 TET3O43151 1660 aa13.07□□□□□ -0.32
CSGALNACT1-202ENST00000397998 ERCC6L2Q5T890 1561 aa13.07□□□□□ -0.32
CSGALNACT1-202ENST00000397998 VPS53Q5VIR6 699 aa13.07□□□□□ -0.32
CSGALNACT1-202ENST00000397998 CREB3L3Q68CJ9 461 aa13.07□□□□□ -0.32
CSGALNACT1-202ENST00000397998 IQGAP1P46940 1657 aa13.06□□□□□ -0.32
CSGALNACT1-202ENST00000397998 KIF1BO60333 1816 aa13.06□□□□□ -0.32
CSGALNACT1-202ENST00000397998 SERPINC1P01008 464 aa13.06□□□□□ -0.32
CSGALNACT1-202ENST00000397998 NMIQ13287 307 aaPredicted RBP13.06□□□□□ -0.32
CSGALNACT1-202ENST00000397998 MAPK8IP2Q13387 824 aaPredicted RBP13.06□□□□□ -0.32
CSGALNACT1-202ENST00000397998 USP44Q9H0E7 712 aa13.06□□□□□ -0.32
CSGALNACT1-202ENST00000397998 SKILP12757 684 aa13.06□□□□□ -0.32
CSGALNACT1-202ENST00000397998 RUFY3Q7L099 469 aa13.06□□□□□ -0.32
CSGALNACT1-202ENST00000397998 ANO10Q9NW15 660 aa13.06□□□□□ -0.32
CSGALNACT1-202ENST00000397998 DBF4Q9UBU7 674 aaPredicted RBP13.06□□□□□ -0.32
CSGALNACT1-202ENST00000397998 PYCARDQ9ULZ3 195 aa13.06□□□□□ -0.32
CSGALNACT1-202ENST00000397998 NPHP3Q7Z494 1330 aa13.06□□□□□ -0.32
CSGALNACT1-202ENST00000397998 BIN1O00499 593 aa13.06□□□□□ -0.32
CSGALNACT1-202ENST00000397998 TRDNQ13061 729 aa13.06□□□□□ -0.32
CSGALNACT1-202ENST00000397998 FSIP1Q8NA03 581 aa13.06□□□□□ -0.32
CSGALNACT1-202ENST00000397998 BRF1Q92994 677 aa13.06□□□□□ -0.32
CSGALNACT1-202ENST00000397998 CCAR1Q8IX12 1150 aaKnown RBP13.05□□□□□ -0.32
CSGALNACT1-202ENST00000397998 STK11IPQ8N1F8 1099 aa13.05□□□□□ -0.32
CSGALNACT1-202ENST00000397998 KIAA0232Q92628 1395 aa13.05□□□□□ -0.32
CSGALNACT1-202ENST00000397998 SFPQP23246 707 aaKnown RBP eCLIP13.05□□□□□ -0.32
CSGALNACT1-202ENST00000397998 LRMPQ12912 555 aa13.05□□□□□ -0.32
CSGALNACT1-202ENST00000397998 TRIM29Q14134 588 aa13.05□□□□□ -0.32
CSGALNACT1-202ENST00000397998 RAPGEF4Q8WZA2 1011 aa13.05□□□□□ -0.32
CSGALNACT1-202ENST00000397998 NLRP2Q9NX02 1062 aa13.05□□□□□ -0.32
CSGALNACT1-202ENST00000397998 NEK1Q96PY6 1258 aa13.05□□□□□ -0.32
CSGALNACT1-202ENST00000397998 PAXBP1Q9Y5B6 917 aa13.05□□□□□ -0.32
CSGALNACT1-202ENST00000397998 CWF19L2Q2TBE0 894 aaKnown RBP13.05□□□□□ -0.32
CSGALNACT1-202ENST00000397998 LARP1Q6PKG0 1096 aaKnown RBP13.05□□□□□ -0.32
CSGALNACT1-202ENST00000397998 LIG1P18858 919 aa13.04□□□□□ -0.32
CSGALNACT1-202ENST00000397998 ATP2B1P20020 1258 aa13.04□□□□□ -0.32
CSGALNACT1-202ENST00000397998 CDC37L1Q7L3B6 337 aa13.04□□□□□ -0.32
CSGALNACT1-202ENST00000397998 CBX8Q9HC52 389 aa13.04□□□□□ -0.32
CSGALNACT1-202ENST00000397998 RGS12O14924 1447 aa13.04□□□□□ -0.32
CSGALNACT1-202ENST00000397998 SHROOM2Q13796 1616 aa13.04□□□□□ -0.32
CSGALNACT1-202ENST00000397998 NFXL1Q6ZNB6 911 aa13.04□□□□□ -0.32
CSGALNACT1-202ENST00000397998 UBXN4Q92575 508 aa13.04□□□□□ -0.32
CSGALNACT1-202ENST00000397998 FAM227BQ96M60 508 aa13.04□□□□□ -0.32
CSGALNACT1-202ENST00000397998 TRERF1Q96PN7 1200 aa13.04□□□□□ -0.32
CSGALNACT1-202ENST00000397998 MTMR6Q9Y217 621 aa13.04□□□□□ -0.32
CSGALNACT1-202ENST00000397998 AMOTL2Q9Y2J4 779 aa13.04□□□□□ -0.32
CSGALNACT1-202ENST00000397998 CCDC171Q6TFL3 1326 aa13.04□□□□□ -0.32
CSGALNACT1-202ENST00000397998 RNF17Q9BXT8 1623 aaKnown RBP13.04□□□□□ -0.32
CSGALNACT1-202ENST00000397998 PTH1RQ03431 593 aa13.04□□□□□ -0.32
CSGALNACT1-202ENST00000397998 STX1AQ16623 288 aa13.04□□□□□ -0.32
CSGALNACT1-202ENST00000397998 ESCO1Q5FWF5 840 aa13.04□□□□□ -0.32
CSGALNACT1-202ENST00000397998 ISM2Q6H9L7 571 aa13.04□□□□□ -0.32
CSGALNACT1-202ENST00000397998 OLFM4Q6UX06 510 aa13.04□□□□□ -0.32
CSGALNACT1-202ENST00000397998 GTPBP4Q9BZE4 634 aaKnown RBP13.04□□□□□ -0.32
CSGALNACT1-202ENST00000397998 GPS2Q13227 327 aa13.03□□□□□ -0.32
CSGALNACT1-202ENST00000397998 ME3Q16798 604 aa13.03□□□□□ -0.32
CSGALNACT1-202ENST00000397998 CCDC34Q96HJ3 373 aa13.03□□□□□ -0.32
CSGALNACT1-202ENST00000397998 PES1O00541 588 aaKnown RBP13.03□□□□□ -0.32
CSGALNACT1-202ENST00000397998 LRRFIP1Q32MZ4 808 aaKnown RBP13.03□□□□□ -0.32
CSGALNACT1-202ENST00000397998 TTC41PQ6P2S7 1318 aa13.03□□□□□ -0.32
CSGALNACT1-202ENST00000397998 TMC6Q7Z403 805 aa13.03□□□□□ -0.32
CSGALNACT1-202ENST00000397998 SMTNL1A8MU46 457 aa13.02□□□□□ -0.32
CSGALNACT1-202ENST00000397998 ADCK5Q3MIX3 580 aa13.02□□□□□ -0.32
CSGALNACT1-202ENST00000397998 TTC6Q86TZ1 520 aa13.02□□□□□ -0.32
CSGALNACT1-202ENST00000397998 RBM33Q96EV2 1170 aaKnown RBP13.02□□□□□ -0.32
CSGALNACT1-202ENST00000397998 CTAGE5O15320 804 aa13.02□□□□□ -0.33
CSGALNACT1-202ENST00000397998 FKBP4Q02790 459 aaKnown RBP eCLIP13.02□□□□□ -0.33
CSGALNACT1-202ENST00000397998 CFAP100Q494V2 611 aa13.02□□□□□ -0.33
CSGALNACT1-202ENST00000397998 MYD88Q99836 296 aa13.02□□□□□ -0.33
CSGALNACT1-202ENST00000397998 EFCAB6Q5THR3 1501 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms