RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 TTLL7Q6ZT98 887 aa32.75■■■□□ 2.83
TSPAN4-207ENST00000397411 NPHP1O15259 732 aa32.74■■■□□ 2.83
TSPAN4-207ENST00000397411 NLGN2Q8NFZ4 835 aa32.74■■■□□ 2.83
TSPAN4-207ENST00000397411 ERVV-1B6SEH8 477 aa32.73■■■□□ 2.83
TSPAN4-207ENST00000397411 ZBTB3Q9H5J0 574 aa32.73■■■□□ 2.83
TSPAN4-207ENST00000397411 MAP3K15Q6ZN16 1313 aa32.73■■■□□ 2.83
TSPAN4-207ENST00000397411 FANCIQ9NVI1 1328 aa32.73■■■□□ 2.83
TSPAN4-207ENST00000397411 SCN7AQ01118 1682 aa32.72■■■□□ 2.83
TSPAN4-207ENST00000397411 CCDC30Q5VVM6 783 aa32.72■■■□□ 2.83
TSPAN4-207ENST00000397411 COPS6Q7L5N1 327 aa32.72■■■□□ 2.83
TSPAN4-207ENST00000397411 TSPYL6Q8N831 410 aa32.72■■■□□ 2.83
TSPAN4-207ENST00000397411 HLFQ16534 295 aa32.71■■■□□ 2.83
TSPAN4-207ENST00000397411 TWISTNBQ3B726 338 aaPredicted RBP32.71■■■□□ 2.83
TSPAN4-207ENST00000397411 PELP1Q8IZL8 1130 aaKnown RBP32.71■■■□□ 2.83
TSPAN4-207ENST00000397411 XAGE3Q8WTP9 111 aa32.71■■■□□ 2.83
TSPAN4-207ENST00000397411 HYPKQ9NX55 129 aa32.71■■■□□ 2.83
TSPAN4-207ENST00000397411 RGL2O15211 777 aa32.7■■■□□ 2.83
TSPAN4-207ENST00000397411 NIP7Q9Y221 180 aaKnown RBP eCLIP32.7■■■□□ 2.83
TSPAN4-207ENST00000397411 BCORQ6W2J9 1755 aa32.7■■■□□ 2.82
TSPAN4-207ENST00000397411 SPINK5Q9NQ38 1064 aaPredicted RBP32.69■■■□□ 2.82
TSPAN4-207ENST00000397411 EXOSC9Q06265 439 aaKnown RBP32.68■■■□□ 2.82
TSPAN4-207ENST00000397411 CARMIL3Q8ND23 1372 aa32.68■■■□□ 2.82
TSPAN4-207ENST00000397411 TGFB2P61812 414 aa32.67■■■□□ 2.82
TSPAN4-207ENST00000397411 GPR162Q16538 588 aa32.67■■■□□ 2.82
TSPAN4-207ENST00000397411 LRP10Q7Z4F1 713 aa32.67■■■□□ 2.82
TSPAN4-207ENST00000397411 STK31Q9BXU1 1019 aa32.67■■■□□ 2.82
TSPAN4-207ENST00000397411 ZNF521Q96K83 1311 aa32.66■■■□□ 2.82
TSPAN4-207ENST00000397411 AFDNP55196 1824 aaKnown RBP32.65■■■□□ 2.82
TSPAN4-207ENST00000397411 FAM177BA6PVY3 158 aa32.64■■■□□ 2.82
TSPAN4-207ENST00000397411 E9PSI1 815 aa32.64■■■□□ 2.82
TSPAN4-207ENST00000397411 NUP98P52948 1817 aa32.64■■■□□ 2.82
TSPAN4-207ENST00000397411 NBPF5PQ86XG9 351 aaPredicted RBP32.64■■■□□ 2.82
TSPAN4-207ENST00000397411 C10orf71Q711Q0 1435 aa32.63■■■□□ 2.81
TSPAN4-207ENST00000397411 GIGYF2Q6Y7W6 1299 aaKnown RBP32.63■■■□□ 2.81
TSPAN4-207ENST00000397411 A0A0G2JLW4 131 aa32.62■■■□□ 2.81
TSPAN4-207ENST00000397411 TCERG1O14776 1098 aaKnown RBP32.62■■■□□ 2.81
TSPAN4-207ENST00000397411 GTF2E1P29083 439 aaPredicted RBP32.62■■■□□ 2.81
TSPAN4-207ENST00000397411 CNBD1Q8NA66 436 aa32.62■■■□□ 2.81
TSPAN4-207ENST00000397411 GPTP24298 496 aa32.61■■■□□ 2.81
TSPAN4-207ENST00000397411 ST5P78524 1137 aa32.61■■■□□ 2.81
TSPAN4-207ENST00000397411 TPTE2Q6XPS3 522 aa32.61■■■□□ 2.81
TSPAN4-207ENST00000397411 ANKRD13DQ6ZTN6 518 aa32.61■■■□□ 2.81
TSPAN4-207ENST00000397411 HSP90AB3PQ58FF7 597 aa32.6■■■□□ 2.81
TSPAN4-207ENST00000397411 WWC3Q9ULE0 1092 aa32.6■■■□□ 2.81
TSPAN4-207ENST00000397411 KIF13BQ9NQT8 1826 aa32.59■■■□□ 2.81
TSPAN4-207ENST00000397411 PRR5LQ6MZQ0 368 aa32.59■■■□□ 2.81
TSPAN4-207ENST00000397411 CCDC24Q8N4L8 307 aa32.59■■■□□ 2.81
TSPAN4-207ENST00000397411 PLBD2Q8NHP8 589 aa32.59■■■□□ 2.81
TSPAN4-207ENST00000397411 VAMP4O75379 141 aa32.58■■■□□ 2.81
TSPAN4-207ENST00000397411 DPEP1P16444 411 aa32.58■■■□□ 2.81
TSPAN4-207ENST00000397411 HNRNPUQ00839 825 aaKnown RBP eCLIP32.58■■■□□ 2.81
TSPAN4-207ENST00000397411 PHAXQ9H814 394 aaKnown RBP32.58■■■□□ 2.81
TSPAN4-207ENST00000397411 SLFN5Q08AF3 891 aa32.57■■■□□ 2.8
TSPAN4-207ENST00000397411 RIC3Q7Z5B4 369 aa32.57■■■□□ 2.8
TSPAN4-207ENST00000397411 NYXQ9GZU5 481 aa32.57■■■□□ 2.8
TSPAN4-207ENST00000397411 N4BP2Q86UW6 1770 aaPredicted RBP32.56■■■□□ 2.8
TSPAN4-207ENST00000397411 DDX58O95786 925 aaKnown RBP32.56■■■□□ 2.8
TSPAN4-207ENST00000397411 SLC4A2P04920 1241 aa32.56■■■□□ 2.8
TSPAN4-207ENST00000397411 NRXN2Q9P2S2 1712 aa32.55■■■□□ 2.8
TSPAN4-207ENST00000397411 PDE6BP35913 854 aa32.55■■■□□ 2.8
TSPAN4-207ENST00000397411 ZNF34Q8IZ26 560 aa32.55■■■□□ 2.8
TSPAN4-207ENST00000397411 BRIP1Q9BX63 1249 aa32.55■■■□□ 2.8
TSPAN4-207ENST00000397411 ATP10DQ9P241 1426 aa32.54■■■□□ 2.8
TSPAN4-207ENST00000397411 TCIRG1Q13488 830 aa32.54■■■□□ 2.8
TSPAN4-207ENST00000397411 PARP10Q53GL7 1025 aa32.54■■■□□ 2.8
TSPAN4-207ENST00000397411 PPP1R42Q7Z4L9 355 aa32.54■■■□□ 2.8
TSPAN4-207ENST00000397411 CDCA7LQ96GN5 454 aa32.54■■■□□ 2.8
TSPAN4-207ENST00000397411 H0YIN7 160 aa32.53■■■□□ 2.8
TSPAN4-207ENST00000397411 CHRNA5P30532 468 aa32.53■■■□□ 2.8
TSPAN4-207ENST00000397411 C2CD5Q86YS7 1000 aa32.53■■■□□ 2.8
TSPAN4-207ENST00000397411 PXDNLA1KZ92 1463 aa32.53■■■□□ 2.8
TSPAN4-207ENST00000397411 PIM2Q9P1W9 311 aa32.52■■■□□ 2.8
TSPAN4-207ENST00000397411 SUSD4Q5VX71 490 aa32.51■■■□□ 2.79
TSPAN4-207ENST00000397411 GRIN3BO60391 1043 aa32.5■■■□□ 2.79
TSPAN4-207ENST00000397411 PDZRN3Q9UPQ7 1066 aa32.5■■■□□ 2.79
TSPAN4-207ENST00000397411 BCS1LQ9Y276 419 aa32.5■■■□□ 2.79
TSPAN4-207ENST00000397411 UTP14AQ9BVJ6 771 aaKnown RBP32.49■■■□□ 2.79
TSPAN4-207ENST00000397411 UBN2Q6ZU65 1347 aa32.49■■■□□ 2.79
TSPAN4-207ENST00000397411 YBX3P16989 372 aaKnown RBP eCLIP32.48■■■□□ 2.79
TSPAN4-207ENST00000397411 NUTM1Q86Y26 1132 aa32.48■■■□□ 2.79
TSPAN4-207ENST00000397411 CACNA1FO60840 1977 aa32.47■■■□□ 2.79
TSPAN4-207ENST00000397411 ZNF622Q969S3 477 aaKnown RBP eCLIP32.47■■■□□ 2.79
TSPAN4-207ENST00000397411 ATP5J2-PTCD1G3V325 749 aa32.46■■■□□ 2.79
TSPAN4-207ENST00000397411 KCNA3P22001 575 aa32.46■■■□□ 2.79
TSPAN4-207ENST00000397411 DALRD3Q5D0E6 543 aaKnown RBP32.46■■■□□ 2.79
TSPAN4-207ENST00000397411 ERFEQ4G0M1 354 aa32.45■■■□□ 2.79
TSPAN4-207ENST00000397411 G2E3Q7L622 706 aa32.45■■■□□ 2.79
TSPAN4-207ENST00000397411 NLRP10Q86W26 655 aa32.45■■■□□ 2.79
TSPAN4-207ENST00000397411 KIAA1551Q9HCM1 1747 aa32.44■■■□□ 2.78
TSPAN4-207ENST00000397411 KSR2Q6VAB6 950 aa32.44■■■□□ 2.78
TSPAN4-207ENST00000397411 TRMT112Q9UI30 125 aaKnown RBP32.44■■■□□ 2.78
TSPAN4-207ENST00000397411 MAP3K2Q9Y2U5 619 aa32.44■■■□□ 2.78
TSPAN4-207ENST00000397411 ANKRD36CQ5JPF3 1778 aa32.44■■■□□ 2.78
TSPAN4-207ENST00000397411 FLIIQ13045 1269 aa32.43■■■□□ 2.78
TSPAN4-207ENST00000397411 MYD88Q99836 296 aa32.43■■■□□ 2.78
TSPAN4-207ENST00000397411 ANKRD31Q8N7Z5 1873 aa32.42■■■□□ 2.78
TSPAN4-207ENST00000397411 PI4KAP2A4QPH2 592 aa32.42■■■□□ 2.78
TSPAN4-207ENST00000397411 NTSR2O95665 410 aa32.42■■■□□ 2.78
TSPAN4-207ENST00000397411 FKBP5Q13451 457 aaPredicted RBP32.42■■■□□ 2.78
TSPAN4-207ENST00000397411 TRMT2AQ8IZ69 625 aaKnown RBP32.42■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms