RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 DDX21Q9NR30 783 aaKnown RBP eCLIP21.59■■□□□ 1.05
TSPAN4-205ENST00000397406 PTPRCP08575 1304 aa21.58■■□□□ 1.05
TSPAN4-205ENST00000397406 RLBP1P12271 317 aa21.58■■□□□ 1.05
TSPAN4-205ENST00000397406 PROSER3Q2NL68 480 aa21.58■■□□□ 1.05
TSPAN4-205ENST00000397406 DNAJC10Q8IXB1 793 aa21.58■■□□□ 1.05
TSPAN4-205ENST00000397406 TEX13AQ9BXU3 409 aaPredicted RBP21.58■■□□□ 1.05
TSPAN4-205ENST00000397406 MYH14Q7Z406 1995 aaKnown RBP21.58■■□□□ 1.05
TSPAN4-205ENST00000397406 ERBB4Q15303 1308 aa21.58■■□□□ 1.04
TSPAN4-205ENST00000397406 RPS6KA4O75676 772 aa21.57■■□□□ 1.04
TSPAN4-205ENST00000397406 ANXA1P04083 346 aa21.57■■□□□ 1.04
TSPAN4-205ENST00000397406 FLIIQ13045 1269 aa21.57■■□□□ 1.04
TSPAN4-205ENST00000397406 CRKLP46109 303 aaKnown RBP21.56■■□□□ 1.04
TSPAN4-205ENST00000397406 GPR162Q16538 588 aa21.56■■□□□ 1.04
TSPAN4-205ENST00000397406 INTS5Q6P9B9 1019 aaKnown RBP21.56■■□□□ 1.04
TSPAN4-205ENST00000397406 DZIP1LQ8IYY4 767 aaKnown RBP21.56■■□□□ 1.04
TSPAN4-205ENST00000397406 PANK1Q8TE04 598 aa21.56■■□□□ 1.04
TSPAN4-205ENST00000397406 CLUAP1Q96AJ1 413 aa21.56■■□□□ 1.04
TSPAN4-205ENST00000397406 API5Q9BZZ5 524 aaKnown RBP21.56■■□□□ 1.04
TSPAN4-205ENST00000397406 PHAXQ9H814 394 aaKnown RBP21.56■■□□□ 1.04
TSPAN4-205ENST00000397406 RTCBQ9Y3I0 505 aaKnown RBP21.56■■□□□ 1.04
TSPAN4-205ENST00000397406 CD2APQ9Y5K6 639 aa21.56■■□□□ 1.04
TSPAN4-205ENST00000397406 MS4A1P11836 297 aa21.55■■□□□ 1.04
TSPAN4-205ENST00000397406 TRAPPC3LQ5T215 181 aa21.55■■□□□ 1.04
TSPAN4-205ENST00000397406 LRP10Q7Z4F1 713 aa21.55■■□□□ 1.04
TSPAN4-205ENST00000397406 CRBNQ96SW2 442 aa21.55■■□□□ 1.04
TSPAN4-205ENST00000397406 HYPKQ9NX55 129 aa21.55■■□□□ 1.04
TSPAN4-205ENST00000397406 ABCC4O15439 1325 aa21.55■■□□□ 1.04
TSPAN4-205ENST00000397406 CYP19A1P11511 503 aaPredicted RBP21.54■■□□□ 1.04
TSPAN4-205ENST00000397406 GYS1P13807 737 aa21.54■■□□□ 1.04
TSPAN4-205ENST00000397406 ERICH6BQ5W0A0 696 aa21.54■■□□□ 1.04
TSPAN4-205ENST00000397406 FTSJ3Q8IY81 847 aaKnown RBP21.54■■□□□ 1.04
TSPAN4-205ENST00000397406 NBPF26B4DH59 902 aa21.53■■□□□ 1.04
TSPAN4-205ENST00000397406 STARD3NLO95772 234 aa21.53■■□□□ 1.04
TSPAN4-205ENST00000397406 A1BGP04217 495 aa21.53■■□□□ 1.04
TSPAN4-205ENST00000397406 MMP10P09238 476 aa21.53■■□□□ 1.04
TSPAN4-205ENST00000397406 NBPF10Q6P3W6 841 aaKnown RBP21.53■■□□□ 1.04
TSPAN4-205ENST00000397406 PELP1Q8IZL8 1130 aaKnown RBP21.53■■□□□ 1.04
TSPAN4-205ENST00000397406 NBPF15Q8N660 670 aa21.53■■□□□ 1.04
TSPAN4-205ENST00000397406 EXOC6Q8TAG9 804 aa21.53■■□□□ 1.04
TSPAN4-205ENST00000397406 ADRA2BP18089 450 aa21.52■■□□□ 1.04
TSPAN4-205ENST00000397406 PIP4K2AP48426 406 aaPredicted RBP21.52■■□□□ 1.04
TSPAN4-205ENST00000397406 FKBP5Q13451 457 aaPredicted RBP21.52■■□□□ 1.04
TSPAN4-205ENST00000397406 SRP68Q9UHB9 627 aaKnown RBP21.52■■□□□ 1.04
TSPAN4-205ENST00000397406 COG6Q9Y2V7 657 aa21.52■■□□□ 1.04
TSPAN4-205ENST00000397406 ARFGEF2Q9Y6D5 1785 aa21.51■■□□□ 1.03
TSPAN4-205ENST00000397406 MYL6BP14649 208 aa21.51■■□□□ 1.03
TSPAN4-205ENST00000397406 TMEM57Q8N5G2 664 aa21.51■■□□□ 1.03
TSPAN4-205ENST00000397406 ZNF784Q8NCA9 323 aaPredicted RBP21.51■■□□□ 1.03
TSPAN4-205ENST00000397406 PXDNLA1KZ92 1463 aa21.51■■□□□ 1.03
TSPAN4-205ENST00000397406 C4AP0C0L4 1744 aa21.49■■□□□ 1.03
TSPAN4-205ENST00000397406 MVPQ14764 893 aaKnown RBP21.49■■□□□ 1.03
TSPAN4-205ENST00000397406 ADCY9O60503 1353 aa21.49■■□□□ 1.03
TSPAN4-205ENST00000397406 F6X3S4 739 aa21.48■■□□□ 1.03
TSPAN4-205ENST00000397406 WWC3Q9ULE0 1092 aa21.48■■□□□ 1.03
TSPAN4-205ENST00000397406 RFC4P35249 363 aa21.47■■□□□ 1.03
TSPAN4-205ENST00000397406 INTS3Q68E01 1043 aaKnown RBP21.47■■□□□ 1.03
TSPAN4-205ENST00000397406 XAGE3Q8WTP9 111 aa21.47■■□□□ 1.03
TSPAN4-205ENST00000397406 COPS6Q7L5N1 327 aa21.46■■□□□ 1.03
TSPAN4-205ENST00000397406 NLGN1Q8N2Q7 840 aa21.46■■□□□ 1.03
TSPAN4-205ENST00000397406 CCDC87Q9NVE4 849 aa21.46■■□□□ 1.03
TSPAN4-205ENST00000397406 ZBTB1Q9Y2K1 713 aa21.46■■□□□ 1.03
TSPAN4-205ENST00000397406 USP42Q9H9J4 1324 aaKnown RBP21.46■■□□□ 1.03
TSPAN4-205ENST00000397406 PI4KAP2A4QPH2 592 aa21.46■■□□□ 1.03
TSPAN4-205ENST00000397406 AIMP1Q12904 312 aaKnown RBP21.46■■□□□ 1.03
TSPAN4-205ENST00000397406 ITPRIPQ8IWB1 547 aa21.46■■□□□ 1.03
TSPAN4-205ENST00000397406 PI4KAP1Q8N8J0 262 aa21.46■■□□□ 1.03
TSPAN4-205ENST00000397406 DDX58O95786 925 aaKnown RBP21.45■■□□□ 1.02
TSPAN4-205ENST00000397406 DDR1Q08345 913 aa21.45■■□□□ 1.02
TSPAN4-205ENST00000397406 KSR2Q6VAB6 950 aa21.45■■□□□ 1.02
TSPAN4-205ENST00000397406 C10orf71Q711Q0 1435 aa21.45■■□□□ 1.02
TSPAN4-205ENST00000397406 KIAA1551Q9HCM1 1747 aa21.45■■□□□ 1.02
TSPAN4-205ENST00000397406 ATP10DQ9P241 1426 aa21.44■■□□□ 1.02
TSPAN4-205ENST00000397406 DNAAF4Q8WXU2 420 aa21.44■■□□□ 1.02
TSPAN4-205ENST00000397406 DDX19BQ9UMR2 479 aa21.44■■□□□ 1.02
TSPAN4-205ENST00000397406 SLC4A10Q6U841 1118 aa21.43■■□□□ 1.02
TSPAN4-205ENST00000397406 BCL2L12Q9HB09 334 aa21.43■■□□□ 1.02
TSPAN4-205ENST00000397406 AFDNP55196 1824 aaKnown RBP21.43■■□□□ 1.02
TSPAN4-205ENST00000397406 IL6STP40189 918 aaPredicted RBP21.42■■□□□ 1.02
TSPAN4-205ENST00000397406 CCT4P50991 539 aaKnown RBP21.42■■□□□ 1.02
TSPAN4-205ENST00000397406 TTLL7Q6ZT98 887 aa21.42■■□□□ 1.02
TSPAN4-205ENST00000397406 MAP3K2Q9Y2U5 619 aa21.42■■□□□ 1.02
TSPAN4-205ENST00000397406 CHD4Q14839 1912 aa21.41■■□□□ 1.02
TSPAN4-205ENST00000397406 TM4SF1P30408 202 aa21.41■■□□□ 1.02
TSPAN4-205ENST00000397406 ANKRD13DQ6ZTN6 518 aa21.41■■□□□ 1.02
TSPAN4-205ENST00000397406 NUP98P52948 1817 aa21.4■■□□□ 1.02
TSPAN4-205ENST00000397406 KIF13BQ9NQT8 1826 aa21.4■■□□□ 1.02
TSPAN4-205ENST00000397406 GRIN3BO60391 1043 aa21.4■■□□□ 1.02
TSPAN4-205ENST00000397406 EIF5P55010 431 aaKnown RBP21.4■■□□□ 1.02
TSPAN4-205ENST00000397406 USPL1Q5W0Q7 1092 aa21.4■■□□□ 1.02
TSPAN4-205ENST00000397406 PLBD2Q8NHP8 589 aa21.4■■□□□ 1.02
TSPAN4-205ENST00000397406 PPP4R2Q9NY27 417 aa21.4■■□□□ 1.02
TSPAN4-205ENST00000397406 ANKRD36CQ5JPF3 1778 aa21.4■■□□□ 1.02
TSPAN4-205ENST00000397406 BCORQ6W2J9 1755 aa21.4■■□□□ 1.02
TSPAN4-205ENST00000397406 A0A0G2JLW4 131 aa21.39■■□□□ 1.02
TSPAN4-205ENST00000397406 ZBTB7BO15156 539 aaPredicted RBP21.39■■□□□ 1.02
TSPAN4-205ENST00000397406 KCNA3P22001 575 aa21.39■■□□□ 1.02
TSPAN4-205ENST00000397406 AAMPQ13685 434 aa21.39■■□□□ 1.02
TSPAN4-205ENST00000397406 BEND3Q5T5X7 828 aa21.39■■□□□ 1.02
TSPAN4-205ENST00000397406 RIC3Q7Z5B4 369 aa21.39■■□□□ 1.02
TSPAN4-205ENST00000397406 COL15A1P39059 1388 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms