RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 ATF3P18847 181 aa11.83□□□□□ -0.52
COL4A4-201ENST00000396625 CCDC144CPQ8IYA2 1237 aa11.83□□□□□ -0.52
COL4A4-201ENST00000396625 SELENOSQ9BQE4 189 aa11.83□□□□□ -0.52
COL4A4-201ENST00000396625 SELENOOQ9BVL4 669 aa11.83□□□□□ -0.52
COL4A4-201ENST00000396625 RNF216Q9NWF9 866 aaPredicted RBP11.83□□□□□ -0.52
COL4A4-201ENST00000396625 CUL5Q93034 780 aa11.83□□□□□ -0.52
COL4A4-201ENST00000396625 CCDC196A0A1B0GTZ2 297 aa11.83□□□□□ -0.52
COL4A4-201ENST00000396625 DNAJC21Q5F1R6 531 aaKnown RBP11.83□□□□□ -0.52
COL4A4-201ENST00000396625 SH3BP5O60239 455 aa11.83□□□□□ -0.52
COL4A4-201ENST00000396625 RGS22Q8NE09 1264 aa11.83□□□□□ -0.52
COL4A4-201ENST00000396625 KRT13P13646 458 aa11.83□□□□□ -0.52
COL4A4-201ENST00000396625 LACTBP83111 547 aaPredicted RBP11.83□□□□□ -0.52
COL4A4-201ENST00000396625 HDGFL1Q5TGJ6 251 aa11.83□□□□□ -0.52
COL4A4-201ENST00000396625 TCERG1LQ5VWI1 586 aa11.83□□□□□ -0.52
COL4A4-201ENST00000396625 ADAMTS8Q9UP79 889 aa11.83□□□□□ -0.52
COL4A4-201ENST00000396625 CFAP157Q5JU67 520 aa11.82□□□□□ -0.52
COL4A4-201ENST00000396625 PRC1O43663 620 aa11.82□□□□□ -0.52
COL4A4-201ENST00000396625 SYCP3Q8IZU3 236 aa11.82□□□□□ -0.52
COL4A4-201ENST00000396625 POLA1P09884 1462 aaPredicted RBP11.82□□□□□ -0.52
COL4A4-201ENST00000396625 NDC80O14777 642 aa11.82□□□□□ -0.52
COL4A4-201ENST00000396625 SAMD15Q9P1V8 674 aa11.82□□□□□ -0.52
COL4A4-201ENST00000396625 CCDC172P0C7W6 258 aa11.82□□□□□ -0.52
COL4A4-201ENST00000396625 KIF21BO75037 1637 aa11.82□□□□□ -0.52
COL4A4-201ENST00000396625 TTC21AQ8NDW8 1320 aa11.82□□□□□ -0.52
COL4A4-201ENST00000396625 BCAR3O75815 825 aa11.82□□□□□ -0.52
COL4A4-201ENST00000396625 RBM42Q9BTD8 480 aaKnown RBP11.82□□□□□ -0.52
COL4A4-201ENST00000396625 RFC1P35251 1148 aaPredicted RBP11.82□□□□□ -0.52
COL4A4-201ENST00000396625 PDE1CQ14123 709 aaPredicted RBP11.82□□□□□ -0.52
COL4A4-201ENST00000396625 GOLIM4O00461 696 aa11.82□□□□□ -0.52
COL4A4-201ENST00000396625 GSTA5Q7RTV2 222 aa11.82□□□□□ -0.52
COL4A4-201ENST00000396625 CCDC110Q8TBZ0 833 aa11.82□□□□□ -0.52
COL4A4-201ENST00000396625 MYL6BP14649 208 aa11.81□□□□□ -0.52
COL4A4-201ENST00000396625 FSIP1Q8NA03 581 aa11.81□□□□□ -0.52
COL4A4-201ENST00000396625 VCX3BQ9H321 246 aa11.81□□□□□ -0.52
COL4A4-201ENST00000396625 ERCC3P19447 782 aa11.81□□□□□ -0.52
COL4A4-201ENST00000396625 EHMT1Q9H9B1 1298 aa11.81□□□□□ -0.52
COL4A4-201ENST00000396625 CASQ2O14958 399 aaPredicted RBP11.81□□□□□ -0.52
COL4A4-201ENST00000396625 SRGAP3O43295 1099 aa11.81□□□□□ -0.52
COL4A4-201ENST00000396625 MVPQ14764 893 aaKnown RBP11.81□□□□□ -0.52
COL4A4-201ENST00000396625 SETDB1Q15047 1291 aa11.81□□□□□ -0.52
COL4A4-201ENST00000396625 FYCO1Q9BQS8 1478 aa11.81□□□□□ -0.52
COL4A4-201ENST00000396625 BIN1O00499 593 aa11.81□□□□□ -0.52
COL4A4-201ENST00000396625 GBP1P32455 592 aa11.81□□□□□ -0.52
COL4A4-201ENST00000396625 CCDC170Q8IYT3 715 aa11.81□□□□□ -0.52
COL4A4-201ENST00000396625 TSR2Q969E8 191 aaKnown RBP11.81□□□□□ -0.52
COL4A4-201ENST00000396625 PHF23Q9BUL5 403 aaPredicted RBP11.81□□□□□ -0.52
COL4A4-201ENST00000396625 SATB1Q01826 763 aa11.81□□□□□ -0.52
COL4A4-201ENST00000396625 CPLX4Q7Z7G2 160 aa11.81□□□□□ -0.52
COL4A4-201ENST00000396625 ZEB2O60315 1214 aa11.81□□□□□ -0.52
COL4A4-201ENST00000396625 CCDC77Q9BR77 488 aa11.81□□□□□ -0.52
COL4A4-201ENST00000396625 RABGAP1Q9Y3P9 1069 aa11.81□□□□□ -0.52
COL4A4-201ENST00000396625 A0A1B0GUA9 196 aa11.8□□□□□ -0.52
COL4A4-201ENST00000396625 IDH1O75874 414 aaKnown RBP11.8□□□□□ -0.52
COL4A4-201ENST00000396625 TCP11L2Q8N4U5 519 aa11.8□□□□□ -0.52
COL4A4-201ENST00000396625 BUB1BO60566 1050 aaPredicted RBP11.8□□□□□ -0.52
COL4A4-201ENST00000396625 GPRASP1Q5JY77 1395 aa11.8□□□□□ -0.52
COL4A4-201ENST00000396625 GOLGA8BA8MQT2 603 aa11.8□□□□□ -0.52
COL4A4-201ENST00000396625 ATP2A1O14983 1001 aa11.8□□□□□ -0.52
COL4A4-201ENST00000396625 MYH10P35580 1976 aa11.8□□□□□ -0.52
COL4A4-201ENST00000396625 FLIIQ13045 1269 aa11.8□□□□□ -0.52
COL4A4-201ENST00000396625 TRIM7Q9C029 511 aa11.8□□□□□ -0.52
COL4A4-201ENST00000396625 SLC12A7Q9Y666 1083 aa11.8□□□□□ -0.52
COL4A4-201ENST00000396625 ZNF853P0CG23 659 aa11.8□□□□□ -0.52
COL4A4-201ENST00000396625 CALML4Q96GE6 196 aa11.8□□□□□ -0.52
COL4A4-201ENST00000396625 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.8□□□□□ -0.52
COL4A4-201ENST00000396625 VPS18Q9P253 973 aa11.8□□□□□ -0.52
COL4A4-201ENST00000396625 LUC7L2Q9Y383 392 aaKnown RBP11.8□□□□□ -0.52
COL4A4-201ENST00000396625 AMPD3Q01432 767 aa11.8□□□□□ -0.52
COL4A4-201ENST00000396625 PLEKHO1Q53GL0 409 aaPredicted RBP11.8□□□□□ -0.52
COL4A4-201ENST00000396625 TMCO4Q5TGY1 634 aa11.8□□□□□ -0.52
COL4A4-201ENST00000396625 ZNF354CQ86Y25 554 aa11.8□□□□□ -0.52
COL4A4-201ENST00000396625 GOLGA1Q92805 767 aa11.8□□□□□ -0.52
COL4A4-201ENST00000396625 SEC62Q99442 399 aaKnown RBP11.8□□□□□ -0.52
COL4A4-201ENST00000396625 CAVIN2O95810 425 aa11.8□□□□□ -0.52
COL4A4-201ENST00000396625 PRKAR2BP31323 418 aa11.8□□□□□ -0.52
COL4A4-201ENST00000396625 SSRP1Q08945 709 aaKnown RBP11.8□□□□□ -0.52
COL4A4-201ENST00000396625 CEP85LQ5SZL2 805 aa11.79□□□□□ -0.52
COL4A4-201ENST00000396625 ALDH3A1P30838 453 aa11.79□□□□□ -0.52
COL4A4-201ENST00000396625 STRN4Q9NRL3 753 aa11.79□□□□□ -0.52
COL4A4-201ENST00000396625 SNX16P57768 344 aa11.79□□□□□ -0.52
COL4A4-201ENST00000396625 DDX19AQ9NUU7 478 aaKnown RBP11.79□□□□□ -0.52
COL4A4-201ENST00000396625 CCDC194A0A1B0GVG4 234 aa11.79□□□□□ -0.52
COL4A4-201ENST00000396625 PIP4K2BP78356 416 aa11.79□□□□□ -0.52
COL4A4-201ENST00000396625 STXBP4Q6ZWJ1 553 aa11.79□□□□□ -0.52
COL4A4-201ENST00000396625 EXOC1Q9NV70 894 aa11.79□□□□□ -0.52
COL4A4-201ENST00000396625 PRPHP41219 470 aa11.79□□□□□ -0.52
COL4A4-201ENST00000396625 NUF2Q9BZD4 464 aa11.79□□□□□ -0.52
COL4A4-201ENST00000396625 CABP2Q9NPB3 220 aa11.79□□□□□ -0.52
COL4A4-201ENST00000396625 MTHFSP49914 203 aa11.79□□□□□ -0.52
COL4A4-201ENST00000396625 EXOSC9Q06265 439 aaKnown RBP11.79□□□□□ -0.52
COL4A4-201ENST00000396625 CACNA2D3Q8IZS8 1091 aa11.79□□□□□ -0.52
COL4A4-201ENST00000396625 PCK1P35558 622 aa11.79□□□□□ -0.52
COL4A4-201ENST00000396625 IFT74Q96LB3 600 aa11.79□□□□□ -0.52
COL4A4-201ENST00000396625 AK9Q5TCS8 1911 aa11.79□□□□□ -0.52
COL4A4-201ENST00000396625 CTAGE15A4D2H0 777 aa11.78□□□□□ -0.52
COL4A4-201ENST00000396625 CTAGE8P0CG41 777 aa11.78□□□□□ -0.52
COL4A4-201ENST00000396625 CCDC14Q49A88 953 aa11.78□□□□□ -0.52
COL4A4-201ENST00000396625 CTAGE6Q86UF2 777 aa11.78□□□□□ -0.52
COL4A4-201ENST00000396625 CTAGE4Q8IX94 777 aa11.78□□□□□ -0.52
COL4A4-201ENST00000396625 RNF168Q8IYW5 571 aaPredicted RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms