RNA–Protein interactions for RNA: ENST00000395466.6

SNCAIP-204, Transcript of synuclein alpha interacting protein, humanhuman

TSL 5

Gene SNCAIP, Length 1,888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-204ENST00000395466 SOS2Q07890 1332 aaPredicted RBP16.91■□□□□ 0.3
SNCAIP-204ENST00000395466 NEURL1BA8MQ27 555 aa16.91■□□□□ 0.3
SNCAIP-204ENST00000395466 SNRPA1P09661 255 aaKnown RBP16.91■□□□□ 0.3
SNCAIP-204ENST00000395466 RIC3Q7Z5B4 369 aa16.91■□□□□ 0.3
SNCAIP-204ENST00000395466 UBR2Q8IWV8 1755 aa16.91■□□□□ 0.3
SNCAIP-204ENST00000395466 SHANK3Q9BYB0 1731 aa16.91■□□□□ 0.3
SNCAIP-204ENST00000395466 FSD2A1L4K1 749 aa16.9■□□□□ 0.3
SNCAIP-204ENST00000395466 MYL6BP14649 208 aa16.9■□□□□ 0.3
SNCAIP-204ENST00000395466 MCCP23508 829 aa16.9■□□□□ 0.3
SNCAIP-204ENST00000395466 OS9Q13438 667 aaPredicted RBP16.9■□□□□ 0.3
SNCAIP-204ENST00000395466 COPS6Q7L5N1 327 aa16.9■□□□□ 0.3
SNCAIP-204ENST00000395466 ERC1Q8IUD2 1116 aa16.9■□□□□ 0.3
SNCAIP-204ENST00000395466 METTL22Q9BUU2 404 aaPredicted RBP16.9■□□□□ 0.3
SNCAIP-204ENST00000395466 WDR17Q8IZU2 1322 aa16.9■□□□□ 0.3
SNCAIP-204ENST00000395466 SGSM2O43147 1006 aa16.9■□□□□ 0.3
SNCAIP-204ENST00000395466 CNTROBQ8N137 903 aa16.9■□□□□ 0.3
SNCAIP-204ENST00000395466 FMNL2Q96PY5 1086 aa16.9■□□□□ 0.3
SNCAIP-204ENST00000395466 COL5A2P05997 1499 aaPredicted RBP16.89■□□□□ 0.29
SNCAIP-204ENST00000395466 GLRX3O76003 335 aaKnown RBP16.89■□□□□ 0.29
SNCAIP-204ENST00000395466 NEK4P51957 841 aa16.89■□□□□ 0.29
SNCAIP-204ENST00000395466 TTC5Q8N0Z6 440 aa16.89■□□□□ 0.29
SNCAIP-204ENST00000395466 CLASRPQ8N2M8 674 aaKnown RBP16.89■□□□□ 0.29
SNCAIP-204ENST00000395466 ZGPATQ8N5A5 531 aaKnown RBP16.89■□□□□ 0.29
SNCAIP-204ENST00000395466 IL27Q8NEV9 243 aa16.89■□□□□ 0.29
SNCAIP-204ENST00000395466 CWC22Q9HCG8 908 aaKnown RBP16.89■□□□□ 0.29
SNCAIP-204ENST00000395466 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.89■□□□□ 0.29
SNCAIP-204ENST00000395466 PAPPAQ13219 1627 aa16.89■□□□□ 0.29
SNCAIP-204ENST00000395466 SASH1O94885 1247 aa16.88■□□□□ 0.29
SNCAIP-204ENST00000395466 GCKRQ14397 625 aa16.88■□□□□ 0.29
SNCAIP-204ENST00000395466 HSPA4P34932 840 aa16.88■□□□□ 0.29
SNCAIP-204ENST00000395466 CABP4P57796 275 aa16.88■□□□□ 0.29
SNCAIP-204ENST00000395466 NUCB2P80303 420 aa16.88■□□□□ 0.29
SNCAIP-204ENST00000395466 MYD88Q99836 296 aa16.88■□□□□ 0.29
SNCAIP-204ENST00000395466 GZF1Q9H116 711 aaPredicted RBP16.88■□□□□ 0.29
SNCAIP-204ENST00000395466 RAD50Q92878 1312 aa16.88■□□□□ 0.29
SNCAIP-204ENST00000395466 BAG4O95429 457 aaKnown RBP16.87■□□□□ 0.29
SNCAIP-204ENST00000395466 NEXNQ0ZGT2 675 aa16.87■□□□□ 0.29
SNCAIP-204ENST00000395466 ANKRD13DQ6ZTN6 518 aa16.87■□□□□ 0.29
SNCAIP-204ENST00000395466 TMX3Q96JJ7 454 aa16.87■□□□□ 0.29
SNCAIP-204ENST00000395466 LSG1Q9H089 658 aaKnown RBP16.87■□□□□ 0.29
SNCAIP-204ENST00000395466 PRDM11Q9NQV5 511 aa16.87■□□□□ 0.29
SNCAIP-204ENST00000395466 ECHDC1Q9NTX5 307 aa16.87■□□□□ 0.29
SNCAIP-204ENST00000395466 PTMSP20962 102 aa16.86■□□□□ 0.29
SNCAIP-204ENST00000395466 PIP4K2AP48426 406 aaPredicted RBP16.86■□□□□ 0.29
SNCAIP-204ENST00000395466 MCM2P49736 904 aa16.86■□□□□ 0.29
SNCAIP-204ENST00000395466 PKP1Q13835 747 aa16.86■□□□□ 0.29
SNCAIP-204ENST00000395466 EPHA10Q5JZY3 1008 aa16.86■□□□□ 0.29
SNCAIP-204ENST00000395466 SLAIN2Q9P270 581 aa16.86■□□□□ 0.29
SNCAIP-204ENST00000395466 CUL4AQ13619 759 aa16.86■□□□□ 0.29
SNCAIP-204ENST00000395466 L1TD1Q5T7N2 865 aaKnown RBP16.86■□□□□ 0.29
SNCAIP-204ENST00000395466 ZNF335Q9H4Z2 1342 aaPredicted RBP16.86■□□□□ 0.29
SNCAIP-204ENST00000395466 COL15A1P39059 1388 aa16.85■□□□□ 0.29
SNCAIP-204ENST00000395466 NUP188Q5SRE5 1749 aa16.85■□□□□ 0.29
SNCAIP-204ENST00000395466 ZCRB1Q8TBF4 217 aaKnown RBP16.85■□□□□ 0.29
SNCAIP-204ENST00000395466 EAF2Q96CJ1 260 aaPredicted RBP16.85■□□□□ 0.29
SNCAIP-204ENST00000395466 PCDH11XQ9BZA7 1347 aa16.85■□□□□ 0.29
SNCAIP-204ENST00000395466 PCDH11YQ9BZA8 1340 aa16.85■□□□□ 0.29
SNCAIP-204ENST00000395466 NHSL1Q5SYE7 1610 aa16.85■□□□□ 0.29
SNCAIP-204ENST00000395466 KCPQ6ZWJ8 1503 aa16.85■□□□□ 0.29
SNCAIP-204ENST00000395466 IFIT2P09913 472 aaKnown RBP16.84■□□□□ 0.29
SNCAIP-204ENST00000395466 SKOR2Q2VWA4 1001 aaPredicted RBP16.84■□□□□ 0.29
SNCAIP-204ENST00000395466 TOM1L2Q6ZVM7 507 aa16.84■□□□□ 0.29
SNCAIP-204ENST00000395466 AACSQ86V21 672 aa16.84■□□□□ 0.29
SNCAIP-204ENST00000395466 ZDHHC9Q9Y397 364 aa16.84■□□□□ 0.29
SNCAIP-204ENST00000395466 G3BP1Q13283 466 aaKnown RBP eCLIP16.84■□□□□ 0.29
SNCAIP-204ENST00000395466 NKX1-1Q15270 411 aaPredicted RBP16.84■□□□□ 0.29
SNCAIP-204ENST00000395466 GPATCH3Q96I76 525 aa16.83■□□□□ 0.28
SNCAIP-204ENST00000395466 GOLGA6L3A6NEY3 463 aa16.82■□□□□ 0.28
SNCAIP-204ENST00000395466 NBPF26B4DH59 902 aa16.82■□□□□ 0.28
SNCAIP-204ENST00000395466 ERVV-2B6SEH9 535 aa16.82■□□□□ 0.28
SNCAIP-204ENST00000395466 RFX5P48382 616 aaPredicted RBP16.82■□□□□ 0.28
SNCAIP-204ENST00000395466 NBPF14Q5TI25 921 aa16.82■□□□□ 0.28
SNCAIP-204ENST00000395466 NBPF10Q6P3W6 841 aaKnown RBP16.82■□□□□ 0.28
SNCAIP-204ENST00000395466 CWC27Q6UX04 472 aaKnown RBP16.82■□□□□ 0.28
SNCAIP-204ENST00000395466 NBPF15Q8N660 670 aa16.82■□□□□ 0.28
SNCAIP-204ENST00000395466 CARD10Q9BWT7 1032 aa16.82■□□□□ 0.28
SNCAIP-204ENST00000395466 UPF3BQ9BZI7 483 aaKnown RBP16.82■□□□□ 0.28
SNCAIP-204ENST00000395466 ERBB4Q15303 1308 aa16.82■□□□□ 0.28
SNCAIP-204ENST00000395466 TJP1Q07157 1748 aa16.82■□□□□ 0.28
SNCAIP-204ENST00000395466 TOGARAM1Q9Y4F4 1720 aa16.82■□□□□ 0.28
SNCAIP-204ENST00000395466 KDM4FA0A1W2PPD8 638 aa16.82■□□□□ 0.28
SNCAIP-204ENST00000395466 CASP7P55210 303 aa16.82■□□□□ 0.28
SNCAIP-204ENST00000395466 RABL6Q3YEC7 729 aaPredicted RBP16.82■□□□□ 0.28
SNCAIP-204ENST00000395466 PLBD2Q8NHP8 589 aa16.82■□□□□ 0.28
SNCAIP-204ENST00000395466 KLHDC4Q8TBB5 520 aa16.82■□□□□ 0.28
SNCAIP-204ENST00000395466 COPRSQ9NQ92 184 aa16.82■□□□□ 0.28
SNCAIP-204ENST00000395466 SNX14Q9Y5W7 946 aa16.82■□□□□ 0.28
SNCAIP-204ENST00000395466 XRCC6P12956 609 aaKnown RBP eCLIP16.81■□□□□ 0.28
SNCAIP-204ENST00000395466 EVI5LQ96CN4 794 aa16.81■□□□□ 0.28
SNCAIP-204ENST00000395466 INTS4Q96HW7 963 aaKnown RBP16.81■□□□□ 0.28
SNCAIP-204ENST00000395466 TLR7Q9NYK1 1049 aaKnown RBP16.81■□□□□ 0.28
SNCAIP-204ENST00000395466 TNS2Q63HR2 1409 aa16.8■□□□□ 0.28
SNCAIP-204ENST00000395466 RASEFQ8IZ41 740 aa16.8■□□□□ 0.28
SNCAIP-204ENST00000395466 JARID2Q92833 1246 aaPredicted RBP16.8■□□□□ 0.28
SNCAIP-204ENST00000395466 CCDC8Q9H0W5 538 aaPredicted RBP16.8■□□□□ 0.28
SNCAIP-204ENST00000395466 SIL1Q9H173 461 aa16.8■□□□□ 0.28
SNCAIP-204ENST00000395466 GOLGA6L22H0YM25 854 aa16.8■□□□□ 0.28
SNCAIP-204ENST00000395466 IL2RBP14784 551 aa16.8■□□□□ 0.28
SNCAIP-204ENST00000395466 TTC14Q96N46 770 aa16.8■□□□□ 0.28
SNCAIP-204ENST00000395466 DIAPH3Q9NSV4 1193 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms