RNA–Protein interactions for RNA: ENST00000395360.6

RAPGEF3-203, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 2,325 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-203ENST00000395360 GZF1Q9H116 711 aaPredicted RBP18.96■□□□□ 0.63
RAPGEF3-203ENST00000395360 THSD7AQ9UPZ6 1657 aa18.96■□□□□ 0.63
RAPGEF3-203ENST00000395360 RAB11FIP3O75154 756 aa18.96■□□□□ 0.63
RAPGEF3-203ENST00000395360 RBM6P78332 1123 aaKnown RBP18.96■□□□□ 0.63
RAPGEF3-203ENST00000395360 FAM98CQ17RN3 349 aaKnown RBP18.96■□□□□ 0.63
RAPGEF3-203ENST00000395360 ZCRB1Q8TBF4 217 aaKnown RBP18.96■□□□□ 0.63
RAPGEF3-203ENST00000395360 TUBGCP6Q96RT7 1819 aa18.96■□□□□ 0.63
RAPGEF3-203ENST00000395360 TNS2Q63HR2 1409 aa18.95■□□□□ 0.62
RAPGEF3-203ENST00000395360 MAP3K2Q9Y2U5 619 aa18.95■□□□□ 0.62
RAPGEF3-203ENST00000395360 HEG1Q9ULI3 1381 aa18.95■□□□□ 0.62
RAPGEF3-203ENST00000395360 PCDH11XQ9BZA7 1347 aa18.95■□□□□ 0.62
RAPGEF3-203ENST00000395360 PCDH11YQ9BZA8 1340 aa18.95■□□□□ 0.62
RAPGEF3-203ENST00000395360 ST18O60284 1047 aa18.95■□□□□ 0.62
RAPGEF3-203ENST00000395360 NUTM1Q86Y26 1132 aa18.95■□□□□ 0.62
RAPGEF3-203ENST00000395360 RHPN1Q8TCX5 695 aa18.95■□□□□ 0.62
RAPGEF3-203ENST00000395360 ESYT1Q9BSJ8 1104 aa18.95■□□□□ 0.62
RAPGEF3-203ENST00000395360 RGS17Q9UGC6 210 aaPredicted RBP18.95■□□□□ 0.62
RAPGEF3-203ENST00000395360 EXOC5O00471 708 aa18.94■□□□□ 0.62
RAPGEF3-203ENST00000395360 GBP4Q96PP9 640 aa18.94■□□□□ 0.62
RAPGEF3-203ENST00000395360 CHMLP26374 656 aa18.94■□□□□ 0.62
RAPGEF3-203ENST00000395360 DDB1Q16531 1140 aa18.93■□□□□ 0.62
RAPGEF3-203ENST00000395360 KSR2Q6VAB6 950 aa18.92■□□□□ 0.62
RAPGEF3-203ENST00000395360 KIF1BPQ96EK5 621 aa18.92■□□□□ 0.62
RAPGEF3-203ENST00000395360 IFNL2Q8IZJ0 200 aa18.92■□□□□ 0.62
RAPGEF3-203ENST00000395360 C9orf78Q9NZ63 289 aaPredicted RBP18.92■□□□□ 0.62
RAPGEF3-203ENST00000395360 AOX1Q06278 1338 aa18.92■□□□□ 0.62
RAPGEF3-203ENST00000395360 SIPA1L3O60292 1781 aaPredicted RBP18.92■□□□□ 0.62
RAPGEF3-203ENST00000395360 SHANK3Q9BYB0 1731 aa18.91■□□□□ 0.62
RAPGEF3-203ENST00000395360 SSFA2P28290 1259 aa18.91■□□□□ 0.62
RAPGEF3-203ENST00000395360 RXRBP28702 533 aa18.91■□□□□ 0.62
RAPGEF3-203ENST00000395360 SLC39A6Q13433 755 aa18.91■□□□□ 0.62
RAPGEF3-203ENST00000395360 ANO2Q9NQ90 1003 aa18.91■□□□□ 0.62
RAPGEF3-203ENST00000395360 HYPKQ9NX55 129 aa18.91■□□□□ 0.62
RAPGEF3-203ENST00000395360 PHKG2P15735 406 aa18.9■□□□□ 0.62
RAPGEF3-203ENST00000395360 CWF19L2Q2TBE0 894 aaKnown RBP18.9■□□□□ 0.62
RAPGEF3-203ENST00000395360 ALDH1L1O75891 902 aa18.9■□□□□ 0.62
RAPGEF3-203ENST00000395360 ZNF790Q6PG37 636 aa18.9■□□□□ 0.62
RAPGEF3-203ENST00000395360 CYP27B1O15528 508 aa18.89■□□□□ 0.61
RAPGEF3-203ENST00000395360 AIMP1Q12904 312 aaKnown RBP18.89■□□□□ 0.61
RAPGEF3-203ENST00000395360 ARXQ96QS3 562 aa18.89■□□□□ 0.61
RAPGEF3-203ENST00000395360 SLC52A2Q9HAB3 445 aa18.89■□□□□ 0.61
RAPGEF3-203ENST00000395360 AK9Q5TCS8 1911 aa18.89■□□□□ 0.61
RAPGEF3-203ENST00000395360 MAP4K4O95819 1239 aaPredicted RBP18.89■□□□□ 0.61
RAPGEF3-203ENST00000395360 HSP90AB4PQ58FF6 505 aa18.89■□□□□ 0.61
RAPGEF3-203ENST00000395360 NFATC2IPQ8NCF5 419 aa18.89■□□□□ 0.61
RAPGEF3-203ENST00000395360 PI4K2BQ8TCG2 481 aa18.89■□□□□ 0.61
RAPGEF3-203ENST00000395360 ADAMTS7Q9UKP4 1686 aa18.88■□□□□ 0.61
RAPGEF3-203ENST00000395360 A0A0G2JS52 829 aa18.88■□□□□ 0.61
RAPGEF3-203ENST00000395360 MCCP23508 829 aa18.88■□□□□ 0.61
RAPGEF3-203ENST00000395360 OS9Q13438 667 aaPredicted RBP18.88■□□□□ 0.61
RAPGEF3-203ENST00000395360 L1TD1Q5T7N2 865 aaKnown RBP18.88■□□□□ 0.61
RAPGEF3-203ENST00000395360 POTEAQ6S8J7 498 aa18.88■□□□□ 0.61
RAPGEF3-203ENST00000395360 SEPT12Q8IYM1 358 aa18.88■□□□□ 0.61
RAPGEF3-203ENST00000395360 DDX21Q9NR30 783 aaKnown RBP eCLIP18.88■□□□□ 0.61
RAPGEF3-203ENST00000395360 KDM6AO15550 1401 aaPredicted RBP18.88■□□□□ 0.61
RAPGEF3-203ENST00000395360 NEK4P51957 841 aa18.88■□□□□ 0.61
RAPGEF3-203ENST00000395360 MTX1Q13505 466 aa18.88■□□□□ 0.61
RAPGEF3-203ENST00000395360 NKX1-1Q15270 411 aaPredicted RBP18.88■□□□□ 0.61
RAPGEF3-203ENST00000395360 DDX58O95786 925 aaKnown RBP18.87■□□□□ 0.61
RAPGEF3-203ENST00000395360 PDIA6Q15084 440 aa18.87■□□□□ 0.61
RAPGEF3-203ENST00000395360 RTN4Q9NQC3 1192 aaKnown RBP18.87■□□□□ 0.61
RAPGEF3-203ENST00000395360 GOLGA6L3A6NEY3 463 aa18.86■□□□□ 0.61
RAPGEF3-203ENST00000395360 DDX54Q8TDD1 881 aaKnown RBP18.86■□□□□ 0.61
RAPGEF3-203ENST00000395360 PALD1Q9ULE6 856 aa18.86■□□□□ 0.61
RAPGEF3-203ENST00000395360 LINS1Q8NG48 757 aa18.86■□□□□ 0.61
RAPGEF3-203ENST00000395360 DCAF5Q96JK2 942 aa18.86■□□□□ 0.61
RAPGEF3-203ENST00000395360 IL25Q9H293 177 aa18.86■□□□□ 0.61
RAPGEF3-203ENST00000395360 ZGPATQ8N5A5 531 aaKnown RBP18.85■□□□□ 0.61
RAPGEF3-203ENST00000395360 SCN11AQ9UI33 1791 aa18.84■□□□□ 0.61
RAPGEF3-203ENST00000395360 FSD2A1L4K1 749 aa18.84■□□□□ 0.61
RAPGEF3-203ENST00000395360 GRM8O00222 908 aa18.84■□□□□ 0.61
RAPGEF3-203ENST00000395360 MYL6BP14649 208 aa18.84■□□□□ 0.61
RAPGEF3-203ENST00000395360 NUCB2P80303 420 aa18.84■□□□□ 0.61
RAPGEF3-203ENST00000395360 CWC22Q9HCG8 908 aaKnown RBP18.84■□□□□ 0.61
RAPGEF3-203ENST00000395360 PA2G4Q9UQ80 394 aaKnown RBP18.84■□□□□ 0.61
RAPGEF3-203ENST00000395360 HDAC5Q9UQL6 1122 aa18.84■□□□□ 0.61
RAPGEF3-203ENST00000395360 ANAPC15P60006 121 aa18.84■□□□□ 0.61
RAPGEF3-203ENST00000395360 PKP1Q13835 747 aa18.84■□□□□ 0.61
RAPGEF3-203ENST00000395360 CLEC17AQ6ZS10 378 aa18.84■□□□□ 0.61
RAPGEF3-203ENST00000395360 PTMSP20962 102 aa18.83■□□□□ 0.61
RAPGEF3-203ENST00000395360 RIC3Q7Z5B4 369 aa18.83■□□□□ 0.61
RAPGEF3-203ENST00000395360 CNTROBQ8N137 903 aa18.83■□□□□ 0.61
RAPGEF3-203ENST00000395360 CLASRPQ8N2M8 674 aaKnown RBP18.83■□□□□ 0.61
RAPGEF3-203ENST00000395360 MARCH10Q8NA82 808 aaPredicted RBP18.83■□□□□ 0.61
RAPGEF3-203ENST00000395360 GOLGA6L22H0YM25 854 aa18.83■□□□□ 0.6
RAPGEF3-203ENST00000395360 BAG4O95429 457 aaKnown RBP18.83■□□□□ 0.6
RAPGEF3-203ENST00000395360 SKOR2Q2VWA4 1001 aaPredicted RBP18.83■□□□□ 0.6
RAPGEF3-203ENST00000395360 ZNF496Q96IT1 587 aaPredicted RBP18.83■□□□□ 0.6
RAPGEF3-203ENST00000395360 BCL9O00512 1426 aa18.82■□□□□ 0.6
RAPGEF3-203ENST00000395360 SUCLG2Q96I99 432 aa18.82■□□□□ 0.6
RAPGEF3-203ENST00000395360 CYP2E1P05181 493 aaPredicted RBP18.82■□□□□ 0.6
RAPGEF3-203ENST00000395360 KAZALD1Q96I82 304 aa18.82■□□□□ 0.6
RAPGEF3-203ENST00000395360 BICC1Q9H694 974 aaKnown RBP18.82■□□□□ 0.6
RAPGEF3-203ENST00000395360 TTC41PQ6P2S7 1318 aa18.81■□□□□ 0.6
RAPGEF3-203ENST00000395360 IGKV5-2P06315 115 aa18.81■□□□□ 0.6
RAPGEF3-203ENST00000395360 XRCC6P12956 609 aaKnown RBP eCLIP18.81■□□□□ 0.6
RAPGEF3-203ENST00000395360 TTC5Q8N0Z6 440 aa18.81■□□□□ 0.6
RAPGEF3-203ENST00000395360 TMX3Q96JJ7 454 aa18.81■□□□□ 0.6
RAPGEF3-203ENST00000395360 C5P01031 1676 aa18.81■□□□□ 0.6
RAPGEF3-203ENST00000395360 UTYO14607 1347 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms