RNA–Protein interactions for RNA: ENST00000395303.7

HLA-DMA-202, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

BASIC

Gene HLA-DMA, Length 1,007 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-202ENST00000395303 PDIA6Q15084 440 aa17.4■□□□□ 0.38
HLA-DMA-202ENST00000395303 KRT24Q2M2I5 525 aa17.4■□□□□ 0.38
HLA-DMA-202ENST00000395303 TBC1D9BQ66K14 1250 aa17.4■□□□□ 0.38
HLA-DMA-202ENST00000395303 WWC1Q8IX03 1113 aa17.4■□□□□ 0.38
HLA-DMA-202ENST00000395303 LAS1LQ9Y4W2 734 aaKnown RBP17.4■□□□□ 0.38
HLA-DMA-202ENST00000395303 SERPINB2P05120 415 aa17.39■□□□□ 0.37
HLA-DMA-202ENST00000395303 IL16Q14005 1332 aa17.39■□□□□ 0.37
HLA-DMA-202ENST00000395303 ERVV-1B6SEH8 477 aa17.38■□□□□ 0.37
HLA-DMA-202ENST00000395303 NGEFQ8N5V2 710 aa17.38■□□□□ 0.37
HLA-DMA-202ENST00000395303 ZNF526Q8TF50 670 aaPredicted RBP17.38■□□□□ 0.37
HLA-DMA-202ENST00000395303 CARMIL3Q8ND23 1372 aa17.38■□□□□ 0.37
HLA-DMA-202ENST00000395303 CCER2I3L3R5 266 aa17.37■□□□□ 0.37
HLA-DMA-202ENST00000395303 EIF2S2P20042 333 aaKnown RBP17.37■□□□□ 0.37
HLA-DMA-202ENST00000395303 FAM9BQ8IZU0 186 aa17.37■□□□□ 0.37
HLA-DMA-202ENST00000395303 ZNF652Q9Y2D9 606 aa17.37■□□□□ 0.37
HLA-DMA-202ENST00000395303 MAP3K15Q6ZN16 1313 aa17.37■□□□□ 0.37
HLA-DMA-202ENST00000395303 KCNA3P22001 575 aa17.36■□□□□ 0.37
HLA-DMA-202ENST00000395303 DUSP27Q5VZP5 1158 aa17.36■□□□□ 0.37
HLA-DMA-202ENST00000395303 TTLL7Q6ZT98 887 aa17.36■□□□□ 0.37
HLA-DMA-202ENST00000395303 DDX21Q9NR30 783 aaKnown RBP eCLIP17.36■□□□□ 0.37
HLA-DMA-202ENST00000395303 COL11A2P13942 1736 aaPredicted RBP17.35■□□□□ 0.37
HLA-DMA-202ENST00000395303 ARFGEF2Q9Y6D5 1785 aa17.35■□□□□ 0.37
HLA-DMA-202ENST00000395303 KIF3CO14782 793 aa17.35■□□□□ 0.37
HLA-DMA-202ENST00000395303 MYL6BP14649 208 aa17.35■□□□□ 0.37
HLA-DMA-202ENST00000395303 DPEP1P16444 411 aa17.35■□□□□ 0.37
HLA-DMA-202ENST00000395303 PROSER3Q2NL68 480 aa17.35■□□□□ 0.37
HLA-DMA-202ENST00000395303 BICDL1Q6ZP65 573 aa17.35■□□□□ 0.37
HLA-DMA-202ENST00000395303 SETDB2Q96T68 719 aa17.35■□□□□ 0.37
HLA-DMA-202ENST00000395303 A0A0G2JLW4 131 aa17.34■□□□□ 0.37
HLA-DMA-202ENST00000395303 HLFQ16534 295 aa17.34■□□□□ 0.37
HLA-DMA-202ENST00000395303 WDR63Q8IWG1 891 aa17.34■□□□□ 0.37
HLA-DMA-202ENST00000395303 CACNA1SQ13698 1873 aa17.33■□□□□ 0.37
HLA-DMA-202ENST00000395303 HSPA6P17066 643 aa17.33■□□□□ 0.36
HLA-DMA-202ENST00000395303 HDGFL1Q5TGJ6 251 aa17.33■□□□□ 0.36
HLA-DMA-202ENST00000395303 PRR5LQ6MZQ0 368 aa17.33■□□□□ 0.36
HLA-DMA-202ENST00000395303 KIF6Q6ZMV9 814 aa17.33■□□□□ 0.36
HLA-DMA-202ENST00000395303 SBF1O95248 1867 aa17.33■□□□□ 0.36
HLA-DMA-202ENST00000395303 ANXA1P04083 346 aa17.32■□□□□ 0.36
HLA-DMA-202ENST00000395303 GIGYF2Q6Y7W6 1299 aaKnown RBP17.32■□□□□ 0.36
HLA-DMA-202ENST00000395303 C8orf58Q8NAV2 365 aa17.32■□□□□ 0.36
HLA-DMA-202ENST00000395303 PDZRN3Q9UPQ7 1066 aa17.32■□□□□ 0.36
HLA-DMA-202ENST00000395303 IBTKQ9P2D0 1353 aaPredicted RBP17.31■□□□□ 0.36
HLA-DMA-202ENST00000395303 NECTIN2Q92692 538 aa17.31■□□□□ 0.36
HLA-DMA-202ENST00000395303 BRIP1Q9BX63 1249 aa17.31■□□□□ 0.36
HLA-DMA-202ENST00000395303 CHPF2Q9P2E5 772 aa17.31■□□□□ 0.36
HLA-DMA-202ENST00000395303 DBF4Q9UBU7 674 aaPredicted RBP17.31■□□□□ 0.36
HLA-DMA-202ENST00000395303 NIP7Q9Y221 180 aaKnown RBP eCLIP17.31■□□□□ 0.36
HLA-DMA-202ENST00000395303 BCS1LQ9Y276 419 aa17.31■□□□□ 0.36
HLA-DMA-202ENST00000395303 CCDC88AQ3V6T2 1871 aa17.31■□□□□ 0.36
HLA-DMA-202ENST00000395303 ZNF521Q96K83 1311 aa17.3■□□□□ 0.36
HLA-DMA-202ENST00000395303 ZNF34Q8IZ26 560 aa17.3■□□□□ 0.36
HLA-DMA-202ENST00000395303 CNBD1Q8NA66 436 aa17.3■□□□□ 0.36
HLA-DMA-202ENST00000395303 PIM2Q9P1W9 311 aa17.3■□□□□ 0.36
HLA-DMA-202ENST00000395303 CHRNA5P30532 468 aa17.29■□□□□ 0.36
HLA-DMA-202ENST00000395303 COPS6Q7L5N1 327 aa17.29■□□□□ 0.36
HLA-DMA-202ENST00000395303 TSPYL6Q8N831 410 aa17.29■□□□□ 0.36
HLA-DMA-202ENST00000395303 XAGE3Q8WTP9 111 aa17.29■□□□□ 0.36
HLA-DMA-202ENST00000395303 TSR2Q969E8 191 aaKnown RBP17.29■□□□□ 0.36
HLA-DMA-202ENST00000395303 CHMP4AQ9BY43 222 aa17.29■□□□□ 0.36
HLA-DMA-202ENST00000395303 ZBTB3Q9H5J0 574 aa17.29■□□□□ 0.36
HLA-DMA-202ENST00000395303 SLX4Q8IY92 1834 aa17.28■□□□□ 0.36
HLA-DMA-202ENST00000395303 DIEXFQ68CQ4 756 aaKnown RBP17.28■□□□□ 0.36
HLA-DMA-202ENST00000395303 TPTE2Q6XPS3 522 aa17.28■□□□□ 0.36
HLA-DMA-202ENST00000395303 NBPF5PQ86XG9 351 aaPredicted RBP17.28■□□□□ 0.36
HLA-DMA-202ENST00000395303 HYPKQ9NX55 129 aa17.28■□□□□ 0.36
HLA-DMA-202ENST00000395303 RIC1Q4ADV7 1423 aa17.28■□□□□ 0.36
HLA-DMA-202ENST00000395303 LAMB2P55268 1798 aa17.28■□□□□ 0.36
HLA-DMA-202ENST00000395303 UBN2Q6ZU65 1347 aa17.27■□□□□ 0.36
HLA-DMA-202ENST00000395303 FANCIQ9NVI1 1328 aa17.27■□□□□ 0.36
HLA-DMA-202ENST00000395303 FER1L6Q2WGJ9 1857 aa17.27■□□□□ 0.36
HLA-DMA-202ENST00000395303 TNRC6CQ9HCJ0 1690 aaKnown RBP17.27■□□□□ 0.36
HLA-DMA-202ENST00000395303 PDE6BP35913 854 aa17.27■□□□□ 0.36
HLA-DMA-202ENST00000395303 ST5P78524 1137 aa17.27■□□□□ 0.36
HLA-DMA-202ENST00000395303 SALL2Q9Y467 1007 aaPredicted RBP17.27■□□□□ 0.36
HLA-DMA-202ENST00000395303 KLRG2A4D1S0 409 aaPredicted RBP17.26■□□□□ 0.35
HLA-DMA-202ENST00000395303 H0YIN7 160 aa17.26■□□□□ 0.35
HLA-DMA-202ENST00000395303 ELL2O00472 640 aaPredicted RBP17.26■□□□□ 0.35
HLA-DMA-202ENST00000395303 IFFO2Q5TF58 517 aa17.26■□□□□ 0.35
HLA-DMA-202ENST00000395303 ARHGAP27Q6ZUM4 889 aa17.26■□□□□ 0.35
HLA-DMA-202ENST00000395303 PLBD2Q8NHP8 589 aa17.26■□□□□ 0.35
HLA-DMA-202ENST00000395303 NYXQ9GZU5 481 aa17.26■□□□□ 0.35
HLA-DMA-202ENST00000395303 DICER1Q9UPY3 1922 aaKnown RBP17.25■□□□□ 0.35
HLA-DMA-202ENST00000395303 PARP10Q53GL7 1025 aa17.25■□□□□ 0.35
HLA-DMA-202ENST00000395303 HSP90AB3PQ58FF7 597 aa17.25■□□□□ 0.35
HLA-DMA-202ENST00000395303 DALRD3Q5D0E6 543 aaKnown RBP17.25■□□□□ 0.35
HLA-DMA-202ENST00000395303 CCDC30Q5VVM6 783 aa17.25■□□□□ 0.35
HLA-DMA-202ENST00000395303 C2CD5Q86YS7 1000 aa17.25■□□□□ 0.35
HLA-DMA-202ENST00000395303 SPINK5Q9NQ38 1064 aaPredicted RBP17.25■□□□□ 0.35
HLA-DMA-202ENST00000395303 AIMP1Q12904 312 aaKnown RBP17.24■□□□□ 0.35
HLA-DMA-202ENST00000395303 TCIRG1Q13488 830 aa17.24■□□□□ 0.35
HLA-DMA-202ENST00000395303 TWISTNBQ3B726 338 aaPredicted RBP17.24■□□□□ 0.35
HLA-DMA-202ENST00000395303 ANKRD13DQ6ZTN6 518 aa17.24■□□□□ 0.35
HLA-DMA-202ENST00000395303 CCDC24Q8N4L8 307 aa17.24■□□□□ 0.35
HLA-DMA-202ENST00000395303 NPHP1O15259 732 aa17.23■□□□□ 0.35
HLA-DMA-202ENST00000395303 NTSR2O95665 410 aa17.23■□□□□ 0.35
HLA-DMA-202ENST00000395303 SRGNP10124 158 aa17.23■□□□□ 0.35
HLA-DMA-202ENST00000395303 GPTP24298 496 aa17.23■□□□□ 0.35
HLA-DMA-202ENST00000395303 SUSD4Q5VX71 490 aa17.23■□□□□ 0.35
HLA-DMA-202ENST00000395303 NMRK2Q9NPI5 230 aa17.23■□□□□ 0.35
HLA-DMA-202ENST00000395303 DDX60Q8IY21 1712 aaKnown RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms