RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 CCDC57Q2TAC2 916 aa19.22■□□□□ 0.67
SMARCD1-202ENST00000394963 RUFY2Q8WXA3 655 aa19.22■□□□□ 0.67
SMARCD1-202ENST00000394963 TNPO1Q92973 898 aaKnown RBP19.22■□□□□ 0.67
SMARCD1-202ENST00000394963 JAKMIP1Q96N16 626 aaKnown RBP19.22■□□□□ 0.67
SMARCD1-202ENST00000394963 C8orf37Q96NL8 207 aa19.22■□□□□ 0.67
SMARCD1-202ENST00000394963 GOLGA6L3A6NEY3 463 aa19.21■□□□□ 0.67
SMARCD1-202ENST00000394963 C3P01024 1663 aa19.21■□□□□ 0.67
SMARCD1-202ENST00000394963 ECHDC1Q9NTX5 307 aa19.21■□□□□ 0.67
SMARCD1-202ENST00000394963 ANKARQ7Z5J8 1434 aa19.21■□□□□ 0.67
SMARCD1-202ENST00000394963 CASTP20810 708 aaKnown RBP19.21■□□□□ 0.67
SMARCD1-202ENST00000394963 USP26Q9BXU7 913 aa19.21■□□□□ 0.67
SMARCD1-202ENST00000394963 CNNM1Q9NRU3 951 aa19.21■□□□□ 0.67
SMARCD1-202ENST00000394963 CHMP4CQ96CF2 233 aa19.2■□□□□ 0.66
SMARCD1-202ENST00000394963 NRXN3Q9Y4C0 1643 aa19.2■□□□□ 0.66
SMARCD1-202ENST00000394963 MEX3CQ5U5Q3 659 aaKnown RBP19.2■□□□□ 0.66
SMARCD1-202ENST00000394963 ESYT1Q9BSJ8 1104 aa19.2■□□□□ 0.66
SMARCD1-202ENST00000394963 C1orf167Q5SNV9 1468 aa19.2■□□□□ 0.66
SMARCD1-202ENST00000394963 GLRX3O76003 335 aaKnown RBP19.2■□□□□ 0.66
SMARCD1-202ENST00000394963 PRIM1P49642 420 aaKnown RBP19.2■□□□□ 0.66
SMARCD1-202ENST00000394963 HELBQ8NG08 1087 aaPredicted RBP19.2■□□□□ 0.66
SMARCD1-202ENST00000394963 PALD1Q9ULE6 856 aa19.19■□□□□ 0.66
SMARCD1-202ENST00000394963 KIF20BQ96Q89 1820 aa19.19■□□□□ 0.66
SMARCD1-202ENST00000394963 TLR7Q9NYK1 1049 aaKnown RBP19.19■□□□□ 0.66
SMARCD1-202ENST00000394963 LMTK3Q96Q04 1460 aa19.19■□□□□ 0.66
SMARCD1-202ENST00000394963 CHMLP26374 656 aa19.19■□□□□ 0.66
SMARCD1-202ENST00000394963 TFCP2Q12800 502 aa19.19■□□□□ 0.66
SMARCD1-202ENST00000394963 CCDC24Q8N4L8 307 aa19.19■□□□□ 0.66
SMARCD1-202ENST00000394963 KDRP35968 1356 aa19.18■□□□□ 0.66
SMARCD1-202ENST00000394963 REREQ9P2R6 1566 aa19.18■□□□□ 0.66
SMARCD1-202ENST00000394963 SPATA31A3Q5VYP0 1347 aa19.18■□□□□ 0.66
SMARCD1-202ENST00000394963 RAB11FIP3O75154 756 aa19.18■□□□□ 0.66
SMARCD1-202ENST00000394963 GOLIM4O00461 696 aa19.18■□□□□ 0.66
SMARCD1-202ENST00000394963 TRIM44Q96DX7 344 aaPredicted RBP19.18■□□□□ 0.66
SMARCD1-202ENST00000394963 LRRC2Q9BYS8 371 aa19.18■□□□□ 0.66
SMARCD1-202ENST00000394963 TRMT112Q9UI30 125 aaKnown RBP19.18■□□□□ 0.66
SMARCD1-202ENST00000394963 STARD3NLO95772 234 aa19.17■□□□□ 0.66
SMARCD1-202ENST00000394963 CAVIN1Q6NZI2 390 aaKnown RBP19.17■□□□□ 0.66
SMARCD1-202ENST00000394963 ERC1Q8IUD2 1116 aa19.17■□□□□ 0.66
SMARCD1-202ENST00000394963 RGPD8O14715 1765 aaPredicted RBP19.17■□□□□ 0.66
SMARCD1-202ENST00000394963 GCKRQ14397 625 aa19.16■□□□□ 0.66
SMARCD1-202ENST00000394963 ITSN1Q15811 1721 aa19.16■□□□□ 0.66
SMARCD1-202ENST00000394963 PKP1Q13835 747 aa19.16■□□□□ 0.66
SMARCD1-202ENST00000394963 EPHA10Q5JZY3 1008 aa19.16■□□□□ 0.66
SMARCD1-202ENST00000394963 FERMT3Q86UX7 667 aa19.16■□□□□ 0.66
SMARCD1-202ENST00000394963 FAM227BQ96M60 508 aa19.16■□□□□ 0.66
SMARCD1-202ENST00000394963 IQSEC3Q9UPP2 1182 aaPredicted RBP19.16■□□□□ 0.66
SMARCD1-202ENST00000394963 CWC25Q9NXE8 425 aaPredicted RBP19.16■□□□□ 0.66
SMARCD1-202ENST00000394963 CEP126Q9P2H0 1117 aa19.16■□□□□ 0.66
SMARCD1-202ENST00000394963 EAF2Q96CJ1 260 aaPredicted RBP19.15■□□□□ 0.66
SMARCD1-202ENST00000394963 SMIM5Q71RC9 77 aa19.15■□□□□ 0.66
SMARCD1-202ENST00000394963 SYNE4Q8N205 404 aa19.15■□□□□ 0.66
SMARCD1-202ENST00000394963 MPNDQ8N594 471 aa19.15■□□□□ 0.66
SMARCD1-202ENST00000394963 NEURL1BA8MQ27 555 aa19.15■□□□□ 0.66
SMARCD1-202ENST00000394963 RNF214Q8ND24 703 aa19.15■□□□□ 0.66
SMARCD1-202ENST00000394963 ARHGAP23Q9P227 1491 aa19.15■□□□□ 0.66
SMARCD1-202ENST00000394963 DDX11L8A8MPP1 907 aa19.14■□□□□ 0.66
SMARCD1-202ENST00000394963 CCDC129Q6ZRS4 1044 aa19.14■□□□□ 0.66
SMARCD1-202ENST00000394963 CCDC83Q8IWF9 413 aa19.14■□□□□ 0.66
SMARCD1-202ENST00000394963 RAB11FIP4Q86YS3 637 aa19.14■□□□□ 0.65
SMARCD1-202ENST00000394963 SSH3Q8TE77 659 aa19.14■□□□□ 0.65
SMARCD1-202ENST00000394963 DBNDD2Q9BQY9 259 aa19.14■□□□□ 0.65
SMARCD1-202ENST00000394963 SMC3Q9UQE7 1217 aa19.14■□□□□ 0.65
SMARCD1-202ENST00000394963 ALDH1L1O75891 902 aa19.14■□□□□ 0.65
SMARCD1-202ENST00000394963 NECAB1Q8N987 351 aa19.14■□□□□ 0.65
SMARCD1-202ENST00000394963 SLFNL1Q499Z3 407 aa19.13■□□□□ 0.65
SMARCD1-202ENST00000394963 METTL22Q9BUU2 404 aaPredicted RBP19.13■□□□□ 0.65
SMARCD1-202ENST00000394963 GOLGA6L4A6NEF3 574 aa19.13■□□□□ 0.65
SMARCD1-202ENST00000394963 IGKV5-2P06315 115 aa19.13■□□□□ 0.65
SMARCD1-202ENST00000394963 FIBPO43427 364 aa19.12■□□□□ 0.65
SMARCD1-202ENST00000394963 CEBPZQ03701 1054 aaKnown RBP19.12■□□□□ 0.65
SMARCD1-202ENST00000394963 PCDH11XQ9BZA7 1347 aa19.12■□□□□ 0.65
SMARCD1-202ENST00000394963 PCDH11YQ9BZA8 1340 aa19.12■□□□□ 0.65
SMARCD1-202ENST00000394963 CHGBP05060 677 aa19.12■□□□□ 0.65
SMARCD1-202ENST00000394963 METTL24Q5JXM2 366 aa19.12■□□□□ 0.65
SMARCD1-202ENST00000394963 TMX3Q96JJ7 454 aa19.12■□□□□ 0.65
SMARCD1-202ENST00000394963 USP32Q8NFA0 1604 aa19.12■□□□□ 0.65
SMARCD1-202ENST00000394963 RBM25P49756 843 aaKnown RBP19.12■□□□□ 0.65
SMARCD1-202ENST00000394963 HAND2P61296 217 aa19.12■□□□□ 0.65
SMARCD1-202ENST00000394963 DDB1Q16531 1140 aa19.12■□□□□ 0.65
SMARCD1-202ENST00000394963 IDH1O75874 414 aaKnown RBP19.11■□□□□ 0.65
SMARCD1-202ENST00000394963 TTC39AQ5SRH9 613 aa19.11■□□□□ 0.65
SMARCD1-202ENST00000394963 DDX11Q96FC9 970 aa19.11■□□□□ 0.65
SMARCD1-202ENST00000394963 SSH2Q76I76 1423 aa19.11■□□□□ 0.65
SMARCD1-202ENST00000394963 SLIT1O75093 1534 aa19.11■□□□□ 0.65
SMARCD1-202ENST00000394963 FAM98CQ17RN3 349 aaKnown RBP19.11■□□□□ 0.65
SMARCD1-202ENST00000394963 LDHAL6AQ6ZMR3 332 aa19.11■□□□□ 0.65
SMARCD1-202ENST00000394963 ADGRB2O60241 1585 aa19.11■□□□□ 0.65
SMARCD1-202ENST00000394963 ATP6V1AP38606 617 aa19.11■□□□□ 0.65
SMARCD1-202ENST00000394963 CHST3Q7LGC8 479 aa19.11■□□□□ 0.65
SMARCD1-202ENST00000394963 NMIQ13287 307 aaPredicted RBP19.1■□□□□ 0.65
SMARCD1-202ENST00000394963 HCLS1P14317 486 aaPredicted RBP19.1■□□□□ 0.65
SMARCD1-202ENST00000394963 IFIT1P09914 478 aaKnown RBP19.1■□□□□ 0.65
SMARCD1-202ENST00000394963 SEC62Q99442 399 aaKnown RBP19.1■□□□□ 0.65
SMARCD1-202ENST00000394963 IFIT5Q13325 482 aaKnown RBP19.09■□□□□ 0.65
SMARCD1-202ENST00000394963 WDR17Q8IZU2 1322 aa19.09■□□□□ 0.65
SMARCD1-202ENST00000394963 PHF14O94880 888 aa19.09■□□□□ 0.65
SMARCD1-202ENST00000394963 PXDNQ92626 1479 aa19.08■□□□□ 0.65
SMARCD1-202ENST00000394963 HOXB7P09629 217 aa19.08■□□□□ 0.65
SMARCD1-202ENST00000394963 NUCB2P80303 420 aa19.08■□□□□ 0.65
SMARCD1-202ENST00000394963 PUS3Q9BZE2 481 aaKnown RBP19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms