RNA–Protein interactions for RNA: ENST00000394546.6

TRPT1-202, Transcript of tRNA phosphotransferase 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TRPT1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPT1-202ENST00000394546 NBPF5PQ86XG9 351 aaPredicted RBP24.45■■□□□ 1.5
TRPT1-202ENST00000394546 NIP7Q9Y221 180 aaKnown RBP eCLIP24.45■■□□□ 1.5
TRPT1-202ENST00000394546 GOLGB1Q14789 3259 aaKnown RBP24.45■■□□□ 1.5
TRPT1-202ENST00000394546 MAP3K15Q6ZN16 1313 aa24.44■■□□□ 1.5
TRPT1-202ENST00000394546 CHRNA5P30532 468 aa24.44■■□□□ 1.5
TRPT1-202ENST00000394546 NCBP3Q53F19 620 aaKnown RBP24.44■■□□□ 1.5
TRPT1-202ENST00000394546 TPTE2Q6XPS3 522 aa24.44■■□□□ 1.5
TRPT1-202ENST00000394546 CCDC27Q2M243 656 aa24.43■■□□□ 1.5
TRPT1-202ENST00000394546 PRR5LQ6MZQ0 368 aa24.43■■□□□ 1.5
TRPT1-202ENST00000394546 C2CD5Q86YS7 1000 aa24.43■■□□□ 1.5
TRPT1-202ENST00000394546 CHMP4AQ9BY43 222 aa24.43■■□□□ 1.5
TRPT1-202ENST00000394546 N4BP2Q86UW6 1770 aaPredicted RBP24.43■■□□□ 1.5
TRPT1-202ENST00000394546 NRXN2Q9P2S2 1712 aa24.43■■□□□ 1.5
TRPT1-202ENST00000394546 ZNF853P0CG23 659 aa24.42■■□□□ 1.5
TRPT1-202ENST00000394546 MBIPQ9NS73 344 aa24.42■■□□□ 1.5
TRPT1-202ENST00000394546 AFDNP55196 1824 aaKnown RBP24.41■■□□□ 1.5
TRPT1-202ENST00000394546 HLFQ16534 295 aa24.41■■□□□ 1.5
TRPT1-202ENST00000394546 ARHGAP27Q6ZUM4 889 aa24.41■■□□□ 1.5
TRPT1-202ENST00000394546 BCORQ6W2J9 1755 aa24.41■■□□□ 1.5
TRPT1-202ENST00000394546 KIAA1551Q9HCM1 1747 aa24.41■■□□□ 1.5
TRPT1-202ENST00000394546 GTF2E1P29083 439 aaPredicted RBP24.4■■□□□ 1.5
TRPT1-202ENST00000394546 HDGFL1Q5TGJ6 251 aa24.4■■□□□ 1.5
TRPT1-202ENST00000394546 TTLL7Q6ZT98 887 aa24.4■■□□□ 1.5
TRPT1-202ENST00000394546 TTLL6Q8N841 843 aa24.4■■□□□ 1.5
TRPT1-202ENST00000394546 ZNF784Q8NCA9 323 aaPredicted RBP24.4■■□□□ 1.5
TRPT1-202ENST00000394546 DDX21Q9NR30 783 aaKnown RBP eCLIP24.4■■□□□ 1.5
TRPT1-202ENST00000394546 PDIA6Q15084 440 aa24.39■■□□□ 1.49
TRPT1-202ENST00000394546 DUSP27Q5VZP5 1158 aa24.39■■□□□ 1.49
TRPT1-202ENST00000394546 NECTIN2Q92692 538 aa24.39■■□□□ 1.49
TRPT1-202ENST00000394546 NYXQ9GZU5 481 aa24.39■■□□□ 1.49
TRPT1-202ENST00000394546 ZBTB3Q9H5J0 574 aa24.38■■□□□ 1.49
TRPT1-202ENST00000394546 KRT24Q2M2I5 525 aa24.37■■□□□ 1.49
TRPT1-202ENST00000394546 WWC1Q8IX03 1113 aa24.37■■□□□ 1.49
TRPT1-202ENST00000394546 DBF4Q9UBU7 674 aaPredicted RBP24.37■■□□□ 1.49
TRPT1-202ENST00000394546 GIGYF2Q6Y7W6 1299 aaKnown RBP24.36■■□□□ 1.49
TRPT1-202ENST00000394546 ZNF622Q969S3 477 aaKnown RBP eCLIP24.36■■□□□ 1.49
TRPT1-202ENST00000394546 ATP10DQ9P241 1426 aa24.35■■□□□ 1.49
TRPT1-202ENST00000394546 HSP90AB3PQ58FF7 597 aa24.35■■□□□ 1.49
TRPT1-202ENST00000394546 COPS6Q7L5N1 327 aa24.35■■□□□ 1.49
TRPT1-202ENST00000394546 FAM9BQ8IZU0 186 aa24.35■■□□□ 1.49
TRPT1-202ENST00000394546 CCDC24Q8N4L8 307 aa24.35■■□□□ 1.49
TRPT1-202ENST00000394546 FAM177BA6PVY3 158 aa24.34■■□□□ 1.49
TRPT1-202ENST00000394546 AIMP1Q12904 312 aaKnown RBP24.34■■□□□ 1.49
TRPT1-202ENST00000394546 PROSER3Q2NL68 480 aa24.34■■□□□ 1.49
TRPT1-202ENST00000394546 LRP10Q7Z4F1 713 aa24.34■■□□□ 1.49
TRPT1-202ENST00000394546 XAGE3Q8WTP9 111 aa24.34■■□□□ 1.49
TRPT1-202ENST00000394546 CNKSR1Q969H4 720 aa24.34■■□□□ 1.49
TRPT1-202ENST00000394546 HYPKQ9NX55 129 aa24.34■■□□□ 1.49
TRPT1-202ENST00000394546 CHPF2Q9P2E5 772 aa24.34■■□□□ 1.49
TRPT1-202ENST00000394546 IL16Q14005 1332 aa24.34■■□□□ 1.49
TRPT1-202ENST00000394546 ANXA1P04083 346 aa24.33■■□□□ 1.49
TRPT1-202ENST00000394546 PARP10Q53GL7 1025 aa24.33■■□□□ 1.49
TRPT1-202ENST00000394546 STYK1Q6J9G0 422 aa24.33■■□□□ 1.49
TRPT1-202ENST00000394546 PPP1R42Q7Z4L9 355 aa24.33■■□□□ 1.49
TRPT1-202ENST00000394546 MASTLQ96GX5 879 aa24.33■■□□□ 1.49
TRPT1-202ENST00000394546 ZNF34Q8IZ26 560 aa24.32■■□□□ 1.48
TRPT1-202ENST00000394546 BRCA1P38398 1863 aaKnown RBP24.32■■□□□ 1.48
TRPT1-202ENST00000394546 GPTP24298 496 aa24.31■■□□□ 1.48
TRPT1-202ENST00000394546 WDR63Q8IWG1 891 aa24.31■■□□□ 1.48
TRPT1-202ENST00000394546 SRGNP10124 158 aa24.3■■□□□ 1.48
TRPT1-202ENST00000394546 IBTKQ9P2D0 1353 aaPredicted RBP24.29■■□□□ 1.48
TRPT1-202ENST00000394546 ARFGEF1Q9Y6D6 1849 aa24.29■■□□□ 1.48
TRPT1-202ENST00000394546 KLRG2A4D1S0 409 aaPredicted RBP24.29■■□□□ 1.48
TRPT1-202ENST00000394546 ELL2O00472 640 aaPredicted RBP24.29■■□□□ 1.48
TRPT1-202ENST00000394546 NPR1P16066 1061 aa24.29■■□□□ 1.48
TRPT1-202ENST00000394546 SOGA3Q5TF21 947 aa24.28■■□□□ 1.48
TRPT1-202ENST00000394546 CCDC30Q5VVM6 783 aa24.28■■□□□ 1.48
TRPT1-202ENST00000394546 ANKRD13DQ6ZTN6 518 aa24.28■■□□□ 1.48
TRPT1-202ENST00000394546 NUP98P52948 1817 aa24.27■■□□□ 1.48
TRPT1-202ENST00000394546 SENP3-EIF4A1A0A087X0R7 540 aa24.27■■□□□ 1.48
TRPT1-202ENST00000394546 SUSD4Q5VX71 490 aa24.27■■□□□ 1.48
TRPT1-202ENST00000394546 C8orf58Q8NAV2 365 aa24.27■■□□□ 1.48
TRPT1-202ENST00000394546 PLBD2Q8NHP8 589 aa24.27■■□□□ 1.48
TRPT1-202ENST00000394546 UTP14AQ9BVJ6 771 aaKnown RBP24.27■■□□□ 1.48
TRPT1-202ENST00000394546 SALL2Q9Y467 1007 aaPredicted RBP24.27■■□□□ 1.48
TRPT1-202ENST00000394546 TCIRG1Q13488 830 aa24.26■■□□□ 1.47
TRPT1-202ENST00000394546 TSR2Q969E8 191 aaKnown RBP24.26■■□□□ 1.47
TRPT1-202ENST00000394546 RNF123Q5XPI4 1314 aa24.26■■□□□ 1.47
TRPT1-202ENST00000394546 UBN2Q6ZU65 1347 aa24.26■■□□□ 1.47
TRPT1-202ENST00000394546 DLEC1Q9Y238 1755 aa24.26■■□□□ 1.47
TRPT1-202ENST00000394546 ALDH1B1P30837 517 aa24.25■■□□□ 1.47
TRPT1-202ENST00000394546 ERFEQ4G0M1 354 aa24.25■■□□□ 1.47
TRPT1-202ENST00000394546 NUTM1Q86Y26 1132 aa24.25■■□□□ 1.47
TRPT1-202ENST00000394546 ANKRD31Q8N7Z5 1873 aa24.25■■□□□ 1.47
TRPT1-202ENST00000394546 ADCY9O60503 1353 aa24.25■■□□□ 1.47
TRPT1-202ENST00000394546 GOLGA2Q08379 1002 aa24.24■■□□□ 1.47
TRPT1-202ENST00000394546 C9orf131Q5VYM1 1079 aa24.24■■□□□ 1.47
TRPT1-202ENST00000394546 GPBP1L1Q9HC44 474 aaPredicted RBP24.24■■□□□ 1.47
TRPT1-202ENST00000394546 C21orf2O43822 256 aa24.23■■□□□ 1.47
TRPT1-202ENST00000394546 NTSR2O95665 410 aa24.23■■□□□ 1.47
TRPT1-202ENST00000394546 PRPF40BQ6NWY9 871 aaKnown RBP24.23■■□□□ 1.47
TRPT1-202ENST00000394546 STK31Q9BXU1 1019 aa24.23■■□□□ 1.47
TRPT1-202ENST00000394546 DDX58O95786 925 aaKnown RBP24.22■■□□□ 1.47
TRPT1-202ENST00000394546 RPGRQ92834 1020 aaKnown RBP24.22■■□□□ 1.47
TRPT1-202ENST00000394546 RNF181Q9P0P0 153 aa24.22■■□□□ 1.47
TRPT1-202ENST00000394546 LMNB1P20700 586 aa24.21■■□□□ 1.47
TRPT1-202ENST00000394546 TWISTNBQ3B726 338 aaPredicted RBP24.21■■□□□ 1.47
TRPT1-202ENST00000394546 RIC3Q7Z5B4 369 aa24.21■■□□□ 1.47
TRPT1-202ENST00000394546 NLRP10Q86W26 655 aa24.21■■□□□ 1.47
TRPT1-202ENST00000394546 NLRP3Q96P20 1036 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms