RNA–Protein interactions for RNA: ENST00000393572.5

FAM3A-205, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2 BASIC

Gene FAM3A, Length 1,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-205ENST00000393572 KIF6Q6ZMV9 814 aa22.9■■□□□ 1.26
FAM3A-205ENST00000393572 NBPF5PQ86XG9 351 aaPredicted RBP22.9■■□□□ 1.26
FAM3A-205ENST00000393572 DLEC1Q9Y238 1755 aa22.89■■□□□ 1.26
FAM3A-205ENST00000393572 NEUROD2Q15784 382 aa22.89■■□□□ 1.25
FAM3A-205ENST00000393572 NIP7Q9Y221 180 aaKnown RBP eCLIP22.88■■□□□ 1.25
FAM3A-205ENST00000393572 CNKSR1Q969H4 720 aa22.87■■□□□ 1.25
FAM3A-205ENST00000393572 RRP7AQ9Y3A4 280 aaKnown RBP22.87■■□□□ 1.25
FAM3A-205ENST00000393572 MAP3K15Q6ZN16 1313 aa22.86■■□□□ 1.25
FAM3A-205ENST00000393572 CALD1Q05682 793 aaKnown RBP22.86■■□□□ 1.25
FAM3A-205ENST00000393572 ZNF622Q969S3 477 aaKnown RBP eCLIP22.86■■□□□ 1.25
FAM3A-205ENST00000393572 NYXQ9GZU5 481 aa22.86■■□□□ 1.25
FAM3A-205ENST00000393572 ZNF316A6NFI3 1004 aaPredicted RBP22.85■■□□□ 1.25
FAM3A-205ENST00000393572 CHL1O00533 1208 aa22.85■■□□□ 1.25
FAM3A-205ENST00000393572 C9orf131Q5VYM1 1079 aa22.85■■□□□ 1.25
FAM3A-205ENST00000393572 STYK1Q6J9G0 422 aa22.85■■□□□ 1.25
FAM3A-205ENST00000393572 TRIM35Q9UPQ4 493 aa22.85■■□□□ 1.25
FAM3A-205ENST00000393572 ZC3H4Q9UPT8 1303 aaKnown RBP22.84■■□□□ 1.25
FAM3A-205ENST00000393572 SOGA3Q5TF21 947 aa22.84■■□□□ 1.25
FAM3A-205ENST00000393572 NGEFQ8N5V2 710 aa22.84■■□□□ 1.25
FAM3A-205ENST00000393572 MASTLQ96GX5 879 aa22.84■■□□□ 1.25
FAM3A-205ENST00000393572 HOXB7P09629 217 aa22.83■■□□□ 1.25
FAM3A-205ENST00000393572 MYL6BP14649 208 aa22.83■■□□□ 1.25
FAM3A-205ENST00000393572 GTF2E1P29083 439 aaPredicted RBP22.83■■□□□ 1.25
FAM3A-205ENST00000393572 ANKRD31Q8N7Z5 1873 aa22.83■■□□□ 1.24
FAM3A-205ENST00000393572 HLFQ16534 295 aa22.82■■□□□ 1.24
FAM3A-205ENST00000393572 ZNF526Q8TF50 670 aaPredicted RBP22.82■■□□□ 1.24
FAM3A-205ENST00000393572 CFAP44Q96MT7 982 aa22.82■■□□□ 1.24
FAM3A-205ENST00000393572 RNF181Q9P0P0 153 aa22.82■■□□□ 1.24
FAM3A-205ENST00000393572 SRGNP10124 158 aa22.81■■□□□ 1.24
FAM3A-205ENST00000393572 EIF2S2P20042 333 aaKnown RBP22.81■■□□□ 1.24
FAM3A-205ENST00000393572 IBTKQ9P2D0 1353 aaPredicted RBP22.8■■□□□ 1.24
FAM3A-205ENST00000393572 KLRG2A4D1S0 409 aaPredicted RBP22.8■■□□□ 1.24
FAM3A-205ENST00000393572 LMNB1P20700 586 aa22.8■■□□□ 1.24
FAM3A-205ENST00000393572 LAS1LQ9Y4W2 734 aaKnown RBP22.8■■□□□ 1.24
FAM3A-205ENST00000393572 ANP32CO43423 234 aa22.79■■□□□ 1.24
FAM3A-205ENST00000393572 NPR1P16066 1061 aa22.79■■□□□ 1.24
FAM3A-205ENST00000393572 GIGYF2Q6Y7W6 1299 aaKnown RBP22.79■■□□□ 1.24
FAM3A-205ENST00000393572 TTLL7Q6ZT98 887 aa22.79■■□□□ 1.24
FAM3A-205ENST00000393572 CCDC24Q8N4L8 307 aa22.79■■□□□ 1.24
FAM3A-205ENST00000393572 KDM2BQ8NHM5 1336 aa22.79■■□□□ 1.24
FAM3A-205ENST00000393572 NUP98P52948 1817 aa22.78■■□□□ 1.24
FAM3A-205ENST00000393572 APAF1O14727 1248 aa22.78■■□□□ 1.24
FAM3A-205ENST00000393572 CHMP4AQ9BY43 222 aa22.78■■□□□ 1.24
FAM3A-205ENST00000393572 PARP10Q53GL7 1025 aa22.77■■□□□ 1.24
FAM3A-205ENST00000393572 HSP90AB3PQ58FF7 597 aa22.77■■□□□ 1.24
FAM3A-205ENST00000393572 PPP1R42Q7Z4L9 355 aa22.77■■□□□ 1.24
FAM3A-205ENST00000393572 ZBTB3Q9H5J0 574 aa22.77■■□□□ 1.24
FAM3A-205ENST00000393572 SBF1O95248 1867 aa22.77■■□□□ 1.24
FAM3A-205ENST00000393572 ALDH1B1P30837 517 aa22.76■■□□□ 1.23
FAM3A-205ENST00000393572 GNAI1P63096 354 aa22.76■■□□□ 1.23
FAM3A-205ENST00000393572 PDIA6Q15084 440 aa22.76■■□□□ 1.23
FAM3A-205ENST00000393572 DDX21Q9NR30 783 aaKnown RBP eCLIP22.76■■□□□ 1.23
FAM3A-205ENST00000393572 IFT57Q9NWB7 429 aa22.76■■□□□ 1.23
FAM3A-205ENST00000393572 COL11A2P13942 1736 aaPredicted RBP22.75■■□□□ 1.23
FAM3A-205ENST00000393572 C21orf2O43822 256 aa22.75■■□□□ 1.23
FAM3A-205ENST00000393572 PRPF40BQ6NWY9 871 aaKnown RBP22.75■■□□□ 1.23
FAM3A-205ENST00000393572 LRP10Q7Z4F1 713 aa22.75■■□□□ 1.23
FAM3A-205ENST00000393572 ZNF34Q8IZ26 560 aa22.75■■□□□ 1.23
FAM3A-205ENST00000393572 LTBP3Q9NS15 1303 aa22.75■■□□□ 1.23
FAM3A-205ENST00000393572 RIC1Q4ADV7 1423 aa22.74■■□□□ 1.23
FAM3A-205ENST00000393572 SENP3-EIF4A1A0A087X0R7 540 aa22.74■■□□□ 1.23
FAM3A-205ENST00000393572 FAM177BA6PVY3 158 aa22.74■■□□□ 1.23
FAM3A-205ENST00000393572 RASSF7Q02833 373 aa22.74■■□□□ 1.23
FAM3A-205ENST00000393572 HDGFL1Q5TGJ6 251 aa22.74■■□□□ 1.23
FAM3A-205ENST00000393572 KIF3CO14782 793 aa22.73■■□□□ 1.23
FAM3A-205ENST00000393572 TAOK3Q9H2K8 898 aa22.73■■□□□ 1.23
FAM3A-205ENST00000393572 RNF123Q5XPI4 1314 aa22.73■■□□□ 1.23
FAM3A-205ENST00000393572 ARFGEF2Q9Y6D5 1785 aa22.73■■□□□ 1.23
FAM3A-205ENST00000393572 NFKBIEO00221 500 aa22.72■■□□□ 1.23
FAM3A-205ENST00000393572 ZNF853P0CG23 659 aa22.72■■□□□ 1.23
FAM3A-205ENST00000393572 NCBP3Q53F19 620 aaKnown RBP22.72■■□□□ 1.23
FAM3A-205ENST00000393572 DBF4Q9UBU7 674 aaPredicted RBP22.72■■□□□ 1.23
FAM3A-205ENST00000393572 TOMM70O94826 608 aa22.71■■□□□ 1.23
FAM3A-205ENST00000393572 GPTP24298 496 aa22.71■■□□□ 1.23
FAM3A-205ENST00000393572 CRY2Q49AN0 593 aa22.71■■□□□ 1.23
FAM3A-205ENST00000393572 CCDC93Q567U6 631 aa22.71■■□□□ 1.23
FAM3A-205ENST00000393572 COPS6Q7L5N1 327 aa22.71■■□□□ 1.23
FAM3A-205ENST00000393572 MBIPQ9NS73 344 aa22.71■■□□□ 1.23
FAM3A-205ENST00000393572 PROSER3Q2NL68 480 aa22.7■■□□□ 1.22
FAM3A-205ENST00000393572 DUSP27Q5VZP5 1158 aa22.7■■□□□ 1.22
FAM3A-205ENST00000393572 C16orf71Q8IYS4 520 aaPredicted RBP22.7■■□□□ 1.22
FAM3A-205ENST00000393572 XAGE3Q8WTP9 111 aa22.7■■□□□ 1.22
FAM3A-205ENST00000393572 HYPKQ9NX55 129 aa22.7■■□□□ 1.22
FAM3A-205ENST00000393572 UBN2Q6ZU65 1347 aa22.7■■□□□ 1.22
FAM3A-205ENST00000393572 SLX4Q8IY92 1834 aa22.7■■□□□ 1.22
FAM3A-205ENST00000393572 FER1L6Q2WGJ9 1857 aa22.69■■□□□ 1.22
FAM3A-205ENST00000393572 CCDC27Q2M243 656 aa22.69■■□□□ 1.22
FAM3A-205ENST00000393572 SUSD4Q5VX71 490 aa22.69■■□□□ 1.22
FAM3A-205ENST00000393572 RTKN2Q8IZC4 609 aa22.69■■□□□ 1.22
FAM3A-205ENST00000393572 NECTIN2Q92692 538 aa22.69■■□□□ 1.22
FAM3A-205ENST00000393572 UTP14AQ9BVJ6 771 aaKnown RBP22.69■■□□□ 1.22
FAM3A-205ENST00000393572 MRS2Q9HD23 443 aa22.69■■□□□ 1.22
FAM3A-205ENST00000393572 ZNF219Q9P2Y4 722 aaPredicted RBP22.69■■□□□ 1.22
FAM3A-205ENST00000393572 GLTPD2A6NH11 291 aa22.68■■□□□ 1.22
FAM3A-205ENST00000393572 NTSR2O95665 410 aa22.68■■□□□ 1.22
FAM3A-205ENST00000393572 ANXA1P04083 346 aa22.68■■□□□ 1.22
FAM3A-205ENST00000393572 AIMP1Q12904 312 aaKnown RBP22.68■■□□□ 1.22
FAM3A-205ENST00000393572 ERFEQ4G0M1 354 aa22.68■■□□□ 1.22
FAM3A-205ENST00000393572 GRIPAP1Q4V328 841 aa22.68■■□□□ 1.22
FAM3A-205ENST00000393572 CC2D2BQ6DHV5 1058 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms