RNA–Protein interactions for RNA: ENST00000393150.7

CASP4-201, Transcript of caspase 4, humanhuman

TSL 1 (best) BASIC

Gene CASP4, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-201ENST00000393150 NLGN1Q8N2Q7 840 aa11.05□□□□□ -0.64
CASP4-201ENST00000393150 NMRK2Q9NPI5 230 aa11.05□□□□□ -0.64
CASP4-201ENST00000393150 PADI6Q6TGC4 694 aa11.04□□□□□ -0.64
CASP4-201ENST00000393150 PHOX2BQ99453 314 aa11.04□□□□□ -0.64
CASP4-201ENST00000393150 EDC4Q6P2E9 1401 aaKnown RBP11.03□□□□□ -0.64
CASP4-201ENST00000393150 MMP10P09238 476 aa11.03□□□□□ -0.64
CASP4-201ENST00000393150 HOXC9P31274 260 aa11.03□□□□□ -0.64
CASP4-201ENST00000393150 TMF1P82094 1093 aa11.03□□□□□ -0.64
CASP4-201ENST00000393150 TRAPPC3LQ5T215 181 aa11.03□□□□□ -0.64
CASP4-201ENST00000393150 C9orf131Q5VYM1 1079 aa11.03□□□□□ -0.64
CASP4-201ENST00000393150 PARP9Q8IXQ6 854 aa11.03□□□□□ -0.64
CASP4-201ENST00000393150 RBM27Q9P2N5 1060 aaKnown RBP11.03□□□□□ -0.64
CASP4-201ENST00000393150 PARP3Q9Y6F1 533 aa11.03□□□□□ -0.64
CASP4-201ENST00000393150 A0A0G2JLW4 131 aa11.02□□□□□ -0.65
CASP4-201ENST00000393150 FAM161AQ3B820 660 aa11.02□□□□□ -0.65
CASP4-201ENST00000393150 REPIN1Q9BWE0 567 aaKnown RBP11.02□□□□□ -0.65
CASP4-201ENST00000393150 FAM198AQ9UFP1 575 aa11.02□□□□□ -0.65
CASP4-201ENST00000393150 NSD2O96028 1365 aa11.01□□□□□ -0.65
CASP4-201ENST00000393150 LY75O60449 1722 aa11.01□□□□□ -0.65
CASP4-201ENST00000393150 LOC102724428A0A0B4J2F2 783 aa11.01□□□□□ -0.65
CASP4-201ENST00000393150 PRSS12P56730 875 aa11.01□□□□□ -0.65
CASP4-201ENST00000393150 SIK1P57059 783 aa11.01□□□□□ -0.65
CASP4-201ENST00000393150 CDCA7LQ96GN5 454 aa11.01□□□□□ -0.65
CASP4-201ENST00000393150 SLC12A5Q9H2X9 1139 aa11.01□□□□□ -0.65
CASP4-201ENST00000393150 RRAGCQ9HB90 399 aa11.01□□□□□ -0.65
CASP4-201ENST00000393150 PIM2Q9P1W9 311 aa11.01□□□□□ -0.65
CASP4-201ENST00000393150 RTCBQ9Y3I0 505 aaKnown RBP11.01□□□□□ -0.65
CASP4-201ENST00000393150 TUBGCP6Q96RT7 1819 aa11.01□□□□□ -0.65
CASP4-201ENST00000393150 FAM208AQ9UK61 1670 aaKnown RBP11□□□□□ -0.65
CASP4-201ENST00000393150 HSPA1AP0DMV8 641 aaKnown RBP11□□□□□ -0.65
CASP4-201ENST00000393150 HSPA1BP0DMV9 641 aaKnown RBP11□□□□□ -0.65
CASP4-201ENST00000393150 RFC4P35249 363 aa11□□□□□ -0.65
CASP4-201ENST00000393150 ATP6V1AP38606 617 aa11□□□□□ -0.65
CASP4-201ENST00000393150 HTRA3P83110 453 aa11□□□□□ -0.65
CASP4-201ENST00000393150 DALRD3Q5D0E6 543 aaKnown RBP11□□□□□ -0.65
CASP4-201ENST00000393150 L3MBTL2Q969R5 705 aa11□□□□□ -0.65
CASP4-201ENST00000393150 TMOD3Q9NYL9 352 aa11□□□□□ -0.65
CASP4-201ENST00000393150 RNF181Q9P0P0 153 aa11□□□□□ -0.65
CASP4-201ENST00000393150 SPG7Q9UQ90 795 aa11□□□□□ -0.65
CASP4-201ENST00000393150 ADGRG1Q9Y653 693 aa11□□□□□ -0.65
CASP4-201ENST00000393150 LTN1O94822 1766 aa11□□□□□ -0.65
CASP4-201ENST00000393150 SBNO2Q9Y2G9 1366 aa10.99□□□□□ -0.65
CASP4-201ENST00000393150 MAP3K19Q56UN5 1328 aa10.99□□□□□ -0.65
CASP4-201ENST00000393150 TMUB1Q9BVT8 246 aa10.99□□□□□ -0.65
CASP4-201ENST00000393150 DOT1LQ8TEK3 1739 aa10.98□□□□□ -0.65
CASP4-201ENST00000393150 PPP1R3GB7ZBB8 358 aa10.98□□□□□ -0.65
CASP4-201ENST00000393150 VEGFAP15692 232 aaPredicted RBP10.98□□□□□ -0.65
CASP4-201ENST00000393150 PTPREP23469 700 aa10.98□□□□□ -0.65
CASP4-201ENST00000393150 NBPF6Q5VWK0 638 aa10.98□□□□□ -0.65
CASP4-201ENST00000393150 AIDAQ96BJ3 306 aa10.98□□□□□ -0.65
CASP4-201ENST00000393150 NBPF4Q96M43 638 aa10.98□□□□□ -0.65
CASP4-201ENST00000393150 PUS7Q96PZ0 661 aaKnown RBP10.98□□□□□ -0.65
CASP4-201ENST00000393150 CARD11Q9BXL7 1154 aa10.98□□□□□ -0.65
CASP4-201ENST00000393150 DPEP1P16444 411 aa10.97□□□□□ -0.65
CASP4-201ENST00000393150 POTEEQ6S8J3 1075 aa10.97□□□□□ -0.65
CASP4-201ENST00000393150 METTL3Q86U44 580 aaKnown RBP10.97□□□□□ -0.65
CASP4-201ENST00000393150 USHBP1Q8N6Y0 703 aa10.97□□□□□ -0.65
CASP4-201ENST00000393150 PIGBQ92521 554 aa10.97□□□□□ -0.65
CASP4-201ENST00000393150 RTL1A6NKG5 1358 aa10.97□□□□□ -0.65
CASP4-201ENST00000393150 C5P01031 1676 aa10.97□□□□□ -0.65
CASP4-201ENST00000393150 C3orf80F5H4A9 247 aa10.96□□□□□ -0.65
CASP4-201ENST00000393150 PXYLP1Q8TE99 480 aa10.96□□□□□ -0.65
CASP4-201ENST00000393150 WDR90Q96KV7 1748 aa10.96□□□□□ -0.65
CASP4-201ENST00000393150 FAM117AQ9C073 453 aa10.96□□□□□ -0.65
CASP4-201ENST00000393150 TSKSQ9UJT2 592 aa10.96□□□□□ -0.65
CASP4-201ENST00000393150 CD163L1Q9NR16 1453 aa10.95□□□□□ -0.66
CASP4-201ENST00000393150 ZC3H4Q9UPT8 1303 aaKnown RBP10.95□□□□□ -0.66
CASP4-201ENST00000393150 NEUROD1Q13562 356 aa10.95□□□□□ -0.66
CASP4-201ENST00000393150 IL27Q8NEV9 243 aa10.95□□□□□ -0.66
CASP4-201ENST00000393150 MEGF6O75095 1541 aa10.95□□□□□ -0.66
CASP4-201ENST00000393150 MON2Q7Z3U7 1717 aa10.95□□□□□ -0.66
CASP4-201ENST00000393150 OATP04181 439 aa10.94□□□□□ -0.66
CASP4-201ENST00000393150 RRS1Q15050 365 aaKnown RBP10.94□□□□□ -0.66
CASP4-201ENST00000393150 LINC00116Q8NCU8 138 aa10.94□□□□□ -0.66
CASP4-201ENST00000393150 A0A1W2PP64 1363 aa10.94□□□□□ -0.66
CASP4-201ENST00000393150 C4BP0C0L5 1744 aa10.94□□□□□ -0.66
CASP4-201ENST00000393150 MMRN1Q13201 1228 aa10.93□□□□□ -0.66
CASP4-201ENST00000393150 VARS2Q5ST30 1063 aaKnown RBP10.93□□□□□ -0.66
CASP4-201ENST00000393150 GIGYF2Q6Y7W6 1299 aaKnown RBP10.93□□□□□ -0.66
CASP4-201ENST00000393150 SMIM5Q71RC9 77 aa10.93□□□□□ -0.66
CASP4-201ENST00000393150 SPNS2Q8IVW8 549 aa10.93□□□□□ -0.66
CASP4-201ENST00000393150 NLRP7Q8WX94 980 aa10.93□□□□□ -0.66
CASP4-201ENST00000393150 PXDNLA1KZ92 1463 aa10.93□□□□□ -0.66
CASP4-201ENST00000393150 C10orf71Q711Q0 1435 aa10.93□□□□□ -0.66
CASP4-201ENST00000393150 CICQ96RK0 1608 aaPredicted RBP10.93□□□□□ -0.66
CASP4-201ENST00000393150 CYP27B1O15528 508 aa10.92□□□□□ -0.66
CASP4-201ENST00000393150 MS4A1P11836 297 aa10.92□□□□□ -0.66
CASP4-201ENST00000393150 TTLL12Q14166 644 aaPredicted RBP10.92□□□□□ -0.66
CASP4-201ENST00000393150 RC3H1Q5TC82 1133 aaKnown RBP10.92□□□□□ -0.66
CASP4-201ENST00000393150 IFNL2Q8IZJ0 200 aa10.92□□□□□ -0.66
CASP4-201ENST00000393150 MARVELD3Q96A59 401 aa10.92□□□□□ -0.66
CASP4-201ENST00000393150 DCAF5Q96JK2 942 aa10.92□□□□□ -0.66
CASP4-201ENST00000393150 EYA1Q99502 592 aa10.92□□□□□ -0.66
CASP4-201ENST00000393150 USP54Q70EL1 1684 aa10.92□□□□□ -0.66
CASP4-201ENST00000393150 PCNTO95613 3336 aa10.92□□□□□ -0.66
CASP4-201ENST00000393150 KCPQ6ZWJ8 1503 aa10.92□□□□□ -0.66
CASP4-201ENST00000393150 GLTPD2A6NH11 291 aa10.91□□□□□ -0.66
CASP4-201ENST00000393150 HSP90AB1P08238 724 aaKnown RBP10.91□□□□□ -0.66
CASP4-201ENST00000393150 LMNB1P20700 586 aa10.91□□□□□ -0.66
CASP4-201ENST00000393150 MDM2Q00987 491 aaPredicted RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms