RNA–Protein interactions for RNA: ENST00000393083.2

PTN-202, Transcript of pleiotrophin, humanhuman

TSL 5 BASIC

Gene PTN, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-202ENST00000393083 ERBB4Q15303 1308 aa17.29■□□□□ 0.36
PTN-202ENST00000393083 GYS1P13807 737 aa17.29■□□□□ 0.36
PTN-202ENST00000393083 MSL1Q68DK7 614 aa17.29■□□□□ 0.36
PTN-202ENST00000393083 NARFQ9UHQ1 456 aa17.29■□□□□ 0.36
PTN-202ENST00000393083 A0A087WZG4 1122 aa17.28■□□□□ 0.36
PTN-202ENST00000393083 LRP10Q7Z4F1 713 aa17.28■□□□□ 0.36
PTN-202ENST00000393083 PANK1Q8TE04 598 aa17.28■□□□□ 0.36
PTN-202ENST00000393083 TNNQ9UQP3 1299 aa17.28■□□□□ 0.36
PTN-202ENST00000393083 BRPF1P55201 1214 aaPredicted RBP17.28■□□□□ 0.36
PTN-202ENST00000393083 MRPL50Q8N5N7 158 aaKnown RBP17.28■□□□□ 0.36
PTN-202ENST00000393083 CCDC136Q96JN2 1154 aa17.28■□□□□ 0.36
PTN-202ENST00000393083 BCL2L12Q9HB09 334 aa17.28■□□□□ 0.36
PTN-202ENST00000393083 NOB1Q9ULX3 412 aaKnown RBP17.28■□□□□ 0.36
PTN-202ENST00000393083 USPL1Q5W0Q7 1092 aa17.27■□□□□ 0.35
PTN-202ENST00000393083 NECTIN2Q92692 538 aa17.27■□□□□ 0.35
PTN-202ENST00000393083 TBC1D2BQ9UPU7 963 aa17.27■□□□□ 0.35
PTN-202ENST00000393083 ZNF330Q9Y3S2 320 aaPredicted RBP17.27■□□□□ 0.35
PTN-202ENST00000393083 TCERG1O14776 1098 aaKnown RBP17.26■□□□□ 0.35
PTN-202ENST00000393083 ZPR1O75312 459 aa17.26■□□□□ 0.35
PTN-202ENST00000393083 MS4A1P11836 297 aa17.26■□□□□ 0.35
PTN-202ENST00000393083 PROSER3Q2NL68 480 aa17.26■□□□□ 0.35
PTN-202ENST00000393083 HDGFL1Q5TGJ6 251 aa17.26■□□□□ 0.35
PTN-202ENST00000393083 FTSJ3Q8IY81 847 aaKnown RBP17.26■□□□□ 0.35
PTN-202ENST00000393083 NLGN1Q8N2Q7 840 aa17.26■□□□□ 0.35
PTN-202ENST00000393083 IPO8O15397 1037 aaKnown RBP17.25■□□□□ 0.35
PTN-202ENST00000393083 CAMTA2O94983 1202 aa17.25■□□□□ 0.35
PTN-202ENST00000393083 TRIM27P14373 513 aa17.25■□□□□ 0.35
PTN-202ENST00000393083 MYL6BP14649 208 aa17.25■□□□□ 0.35
PTN-202ENST00000393083 ATF7IPQ6VMQ6 1270 aa17.25■□□□□ 0.35
PTN-202ENST00000393083 CLUAP1Q96AJ1 413 aa17.25■□□□□ 0.35
PTN-202ENST00000393083 COG6Q9Y2V7 657 aa17.25■□□□□ 0.35
PTN-202ENST00000393083 ANXA1P04083 346 aa17.24■□□□□ 0.35
PTN-202ENST00000393083 RLBP1P12271 317 aa17.24■□□□□ 0.35
PTN-202ENST00000393083 DZIP3Q86Y13 1208 aaKnown RBP17.24■□□□□ 0.35
PTN-202ENST00000393083 DZIP1LQ8IYY4 767 aaKnown RBP17.24■□□□□ 0.35
PTN-202ENST00000393083 DDX21Q9NR30 783 aaKnown RBP eCLIP17.24■□□□□ 0.35
PTN-202ENST00000393083 POLD1P28340 1107 aa17.23■□□□□ 0.35
PTN-202ENST00000393083 NPM2Q86SE8 214 aaKnown RBP17.23■□□□□ 0.35
PTN-202ENST00000393083 CHPF2Q9P2E5 772 aa17.23■□□□□ 0.35
PTN-202ENST00000393083 TM4SF1P30408 202 aa17.23■□□□□ 0.35
PTN-202ENST00000393083 MMP10P09238 476 aa17.22■□□□□ 0.35
PTN-202ENST00000393083 TTLL7Q6ZT98 887 aa17.22■□□□□ 0.35
PTN-202ENST00000393083 ARXQ96QS3 562 aa17.22■□□□□ 0.35
PTN-202ENST00000393083 DBF4Q9UBU7 674 aaPredicted RBP17.22■□□□□ 0.35
PTN-202ENST00000393083 N4BP2Q86UW6 1770 aaPredicted RBP17.21■□□□□ 0.35
PTN-202ENST00000393083 SCN7AQ01118 1682 aa17.21■□□□□ 0.35
PTN-202ENST00000393083 RGL2O15211 777 aa17.21■□□□□ 0.35
PTN-202ENST00000393083 MVPQ14764 893 aaKnown RBP17.21■□□□□ 0.35
PTN-202ENST00000393083 NFIXQ14938 502 aa17.2■□□□□ 0.34
PTN-202ENST00000393083 PELP1Q8IZL8 1130 aaKnown RBP17.2■□□□□ 0.34
PTN-202ENST00000393083 ARHGAP45Q92619 1136 aa17.2■□□□□ 0.34
PTN-202ENST00000393083 BCORQ6W2J9 1755 aa17.19■□□□□ 0.34
PTN-202ENST00000393083 ERVV-1B6SEH8 477 aa17.19■□□□□ 0.34
PTN-202ENST00000393083 DDR1Q08345 913 aa17.19■□□□□ 0.34
PTN-202ENST00000393083 CCDC30Q5VVM6 783 aa17.19■□□□□ 0.34
PTN-202ENST00000393083 CLEC4GQ6UXB4 293 aa17.19■□□□□ 0.34
PTN-202ENST00000393083 COPS6Q7L5N1 327 aa17.19■□□□□ 0.34
PTN-202ENST00000393083 XAGE3Q8WTP9 111 aa17.19■□□□□ 0.34
PTN-202ENST00000393083 CHMP4AQ9BY43 222 aa17.19■□□□□ 0.34
PTN-202ENST00000393083 PPP1R1BQ9UD71 204 aaPredicted RBP17.19■□□□□ 0.34
PTN-202ENST00000393083 MAP3K15Q6ZN16 1313 aa17.19■□□□□ 0.34
PTN-202ENST00000393083 HLFQ16534 295 aa17.19■□□□□ 0.34
PTN-202ENST00000393083 TBC1D9BQ66K14 1250 aa17.19■□□□□ 0.34
PTN-202ENST00000393083 STK31Q9BXU1 1019 aa17.19■□□□□ 0.34
PTN-202ENST00000393083 API5Q9BZZ5 524 aaKnown RBP17.19■□□□□ 0.34
PTN-202ENST00000393083 HYPKQ9NX55 129 aa17.19■□□□□ 0.34
PTN-202ENST00000393083 POLRMTO00411 1230 aaKnown RBP17.18■□□□□ 0.34
PTN-202ENST00000393083 KIF6Q6ZMV9 814 aa17.18■□□□□ 0.34
PTN-202ENST00000393083 ITPRIPQ8IWB1 547 aa17.18■□□□□ 0.34
PTN-202ENST00000393083 TMEM57Q8N5G2 664 aa17.18■□□□□ 0.34
PTN-202ENST00000393083 FHDC1Q9C0D6 1143 aaPredicted RBP17.17■□□□□ 0.34
PTN-202ENST00000393083 ZBTB3Q9H5J0 574 aa17.17■□□□□ 0.34
PTN-202ENST00000393083 ABCC4O15439 1325 aa17.17■□□□□ 0.34
PTN-202ENST00000393083 PTPRCP08575 1304 aa17.17■□□□□ 0.34
PTN-202ENST00000393083 SLC4A2P04920 1241 aa17.16■□□□□ 0.34
PTN-202ENST00000393083 AIMP1Q12904 312 aaKnown RBP17.16■□□□□ 0.34
PTN-202ENST00000393083 PHAXQ9H814 394 aaKnown RBP17.16■□□□□ 0.34
PTN-202ENST00000393083 ZNF652Q9Y2D9 606 aa17.16■□□□□ 0.34
PTN-202ENST00000393083 PARP3Q9Y6F1 533 aa17.16■□□□□ 0.34
PTN-202ENST00000393083 AAMPQ13685 434 aa17.15■□□□□ 0.34
PTN-202ENST00000393083 BICDL1Q6ZP65 573 aa17.15■□□□□ 0.34
PTN-202ENST00000393083 DDX19BQ9UMR2 479 aa17.15■□□□□ 0.34
PTN-202ENST00000393083 GIGYF2Q6Y7W6 1299 aaKnown RBP17.15■□□□□ 0.34
PTN-202ENST00000393083 SYT17Q9BSW7 474 aa17.15■□□□□ 0.34
PTN-202ENST00000393083 SERPINB2P05120 415 aa17.14■□□□□ 0.33
PTN-202ENST00000393083 SETDB2Q96T68 719 aa17.14■□□□□ 0.33
PTN-202ENST00000393083 ATP10DQ9P241 1426 aa17.13■□□□□ 0.33
PTN-202ENST00000393083 ANKRD13DQ6ZTN6 518 aa17.13■□□□□ 0.33
PTN-202ENST00000393083 G2E3Q7L622 706 aa17.13■□□□□ 0.33
PTN-202ENST00000393083 PLBD2Q8NHP8 589 aa17.13■□□□□ 0.33
PTN-202ENST00000393083 NIP7Q9Y221 180 aaKnown RBP eCLIP17.13■□□□□ 0.33
PTN-202ENST00000393083 CD2APQ9Y5K6 639 aa17.13■□□□□ 0.33
PTN-202ENST00000393083 NRXN2Q9P2S2 1712 aa17.12■□□□□ 0.33
PTN-202ENST00000393083 CARMIL3Q8ND23 1372 aa17.12■□□□□ 0.33
PTN-202ENST00000393083 ZNF34Q8IZ26 560 aa17.12■□□□□ 0.33
PTN-202ENST00000393083 C10orf71Q711Q0 1435 aa17.12■□□□□ 0.33
PTN-202ENST00000393083 NUP98P52948 1817 aa17.11■□□□□ 0.33
PTN-202ENST00000393083 UBN2Q6ZU65 1347 aa17.11■□□□□ 0.33
PTN-202ENST00000393083 FLIIQ13045 1269 aa17.11■□□□□ 0.33
PTN-202ENST00000393083 PXDNLA1KZ92 1463 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms