RNA–Protein interactions for RNA: ENST00000390882.1

RNU6-440P-201, Transcript of RNA, U6 small nuclear 440, pseudogene, humanhuman

BASIC

Gene RNU6-440P, Length 105 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-440P-201ENST00000390882 ESF1Q9H501 851 aaKnown RBP3.5□□□□□ -1.85
RNU6-440P-201ENST00000390882 GSC2O15499 205 aa3.49□□□□□ -1.85
RNU6-440P-201ENST00000390882 TRAK2O60296 914 aa3.49□□□□□ -1.85
RNU6-440P-201ENST00000390882 LILRB5O75023 590 aa3.49□□□□□ -1.85
RNU6-440P-201ENST00000390882 AP1G2O75843 785 aa3.49□□□□□ -1.85
RNU6-440P-201ENST00000390882 ZNF865P0CJ78 1059 aaPredicted RBP3.49□□□□□ -1.85
RNU6-440P-201ENST00000390882 SPINK2P20155 84 aa3.49□□□□□ -1.85
RNU6-440P-201ENST00000390882 GRIK1P39086 918 aa3.49□□□□□ -1.85
RNU6-440P-201ENST00000390882 CTDSPL2Q05D32 466 aa3.49□□□□□ -1.85
RNU6-440P-201ENST00000390882 TBC1D9Q6ZT07 1266 aa3.49□□□□□ -1.85
RNU6-440P-201ENST00000390882 RHBDD1Q8TEB9 315 aa3.49□□□□□ -1.85
RNU6-440P-201ENST00000390882 TNFRSF25Q93038 417 aa3.49□□□□□ -1.85
RNU6-440P-201ENST00000390882 RAB6BQ9NRW1 208 aa3.49□□□□□ -1.85
RNU6-440P-201ENST00000390882 HRH3Q9Y5N1 445 aa3.49□□□□□ -1.85
RNU6-440P-201ENST00000390882 GIGYF1O75420 1035 aaPredicted RBP3.48□□□□□ -1.85
RNU6-440P-201ENST00000390882 TGFB1P01137 390 aa3.48□□□□□ -1.85
RNU6-440P-201ENST00000390882 IL2RAP01589 272 aa3.48□□□□□ -1.85
RNU6-440P-201ENST00000390882 FAM157BP0CG42 384 aa3.48□□□□□ -1.85
RNU6-440P-201ENST00000390882 NOS3P29474 1203 aa3.48□□□□□ -1.85
RNU6-440P-201ENST00000390882 NR6A1Q15406 480 aa3.48□□□□□ -1.85
RNU6-440P-201ENST00000390882 FMR1NBQ8N0W7 255 aaPredicted RBP3.48□□□□□ -1.85
RNU6-440P-201ENST00000390882 XAGE2Q96GT9 111 aa3.48□□□□□ -1.85
RNU6-440P-201ENST00000390882 MEGF10Q96KG7 1140 aa3.48□□□□□ -1.85
RNU6-440P-201ENST00000390882 ZIC5Q96T25 663 aa3.48□□□□□ -1.85
RNU6-440P-201ENST00000390882 FHDC1Q9C0D6 1143 aaPredicted RBP3.48□□□□□ -1.85
RNU6-440P-201ENST00000390882 OSBPL3Q9H4L5 887 aa3.48□□□□□ -1.85
RNU6-440P-201ENST00000390882 A0A1W2PNR3 127 aa3.47□□□□□ -1.85
RNU6-440P-201ENST00000390882 B8ZZF3 427 aa3.47□□□□□ -1.85
RNU6-440P-201ENST00000390882 IGLV1-40P01703 118 aa3.47□□□□□ -1.85
RNU6-440P-201ENST00000390882 RNF20Q5VTR2 975 aa3.47□□□□□ -1.85
RNU6-440P-201ENST00000390882 LILRA6Q6PI73 481 aa3.47□□□□□ -1.85
RNU6-440P-201ENST00000390882 DTX1Q86Y01 620 aa3.47□□□□□ -1.85
RNU6-440P-201ENST00000390882 PNMA1Q8ND90 353 aa3.47□□□□□ -1.85
RNU6-440P-201ENST00000390882 SCTRP47872 440 aa3.46□□□□□ -1.86
RNU6-440P-201ENST00000390882 KRTAP19-4Q3LI73 84 aa3.46□□□□□ -1.86
RNU6-440P-201ENST00000390882 PPARGC1BQ86YN6 1023 aaKnown RBP3.46□□□□□ -1.86
RNU6-440P-201ENST00000390882 LRRN4Q8WUT4 740 aa3.46□□□□□ -1.86
RNU6-440P-201ENST00000390882 PRM3Q9NNZ6 103 aa3.46□□□□□ -1.86
RNU6-440P-201ENST00000390882 SNRKQ9NRH2 765 aa3.46□□□□□ -1.86
RNU6-440P-201ENST00000390882 STRN4Q9NRL3 753 aa3.46□□□□□ -1.86
RNU6-440P-201ENST00000390882 APBB1O00213 710 aa3.45□□□□□ -1.86
RNU6-440P-201ENST00000390882 SOCS7O14512 581 aa3.45□□□□□ -1.86
RNU6-440P-201ENST00000390882 EFSO43281 561 aa3.45□□□□□ -1.86
RNU6-440P-201ENST00000390882 USP17L8P0C7I0 530 aa3.45□□□□□ -1.86
RNU6-440P-201ENST00000390882 ATP4AP20648 1035 aa3.45□□□□□ -1.86
RNU6-440P-201ENST00000390882 ADH7P40394 386 aa3.45□□□□□ -1.86
RNU6-440P-201ENST00000390882 ZNF124Q15973 351 aa3.45□□□□□ -1.86
RNU6-440P-201ENST00000390882 ARSJQ5FYB0 599 aaPredicted RBP3.45□□□□□ -1.86
RNU6-440P-201ENST00000390882 C14orf37Q86TY3 774 aa3.45□□□□□ -1.86
RNU6-440P-201ENST00000390882 DZIP1LQ8IYY4 767 aaKnown RBP3.45□□□□□ -1.86
RNU6-440P-201ENST00000390882 AIDAQ96BJ3 306 aa3.45□□□□□ -1.86
RNU6-440P-201ENST00000390882 ZMYND15Q9H091 742 aa3.45□□□□□ -1.86
RNU6-440P-201ENST00000390882 RAD21O60216 631 aa3.44□□□□□ -1.86
RNU6-440P-201ENST00000390882 JUNBP17275 347 aaPredicted RBP3.44□□□□□ -1.86
RNU6-440P-201ENST00000390882 UBTFP17480 764 aaKnown RBP3.44□□□□□ -1.86
RNU6-440P-201ENST00000390882 BUD31P41223 144 aaPredicted RBP3.44□□□□□ -1.86
RNU6-440P-201ENST00000390882 MCM6Q14566 821 aa3.44□□□□□ -1.86
RNU6-440P-201ENST00000390882 SAMD5Q5TGI4 173 aa3.44□□□□□ -1.86
RNU6-440P-201ENST00000390882 DMRTC2Q8IXT2 367 aaPredicted RBP3.44□□□□□ -1.86
RNU6-440P-201ENST00000390882 JAG2Q9Y219 1238 aa3.44□□□□□ -1.86
RNU6-440P-201ENST00000390882 GJA3Q9Y6H8 435 aa3.44□□□□□ -1.86
RNU6-440P-201ENST00000390882 PLA2G4AP47712 749 aa3.43□□□□□ -1.86
RNU6-440P-201ENST00000390882 ESCO1Q5FWF5 840 aa3.43□□□□□ -1.86
RNU6-440P-201ENST00000390882 ZNF648Q5T619 568 aaPredicted RBP3.43□□□□□ -1.86
RNU6-440P-201ENST00000390882 IGF2-ASQ6U949 168 aa3.43□□□□□ -1.86
RNU6-440P-201ENST00000390882 ILDR2Q71H61 639 aa3.43□□□□□ -1.86
RNU6-440P-201ENST00000390882 ABI1Q8IZP0 508 aa3.43□□□□□ -1.86
RNU6-440P-201ENST00000390882 MTMR14Q8NCE2 650 aa3.43□□□□□ -1.86
RNU6-440P-201ENST00000390882 RAXQ9Y2V3 346 aa3.43□□□□□ -1.86
RNU6-440P-201ENST00000390882 A6NJR5 290 aa3.42□□□□□ -1.86
RNU6-440P-201ENST00000390882 NEUROD1Q13562 356 aa3.42□□□□□ -1.86
RNU6-440P-201ENST00000390882 FBXO11Q86XK2 927 aa3.42□□□□□ -1.86
RNU6-440P-201ENST00000390882 ZDHHC13Q8IUH4 622 aa3.42□□□□□ -1.86
RNU6-440P-201ENST00000390882 DTWD1Q8N5C7 304 aa3.42□□□□□ -1.86
RNU6-440P-201ENST00000390882 GJD4Q96KN9 370 aaPredicted RBP3.42□□□□□ -1.86
RNU6-440P-201ENST00000390882 TRIM34Q9BYJ4 488 aa3.42□□□□□ -1.86
RNU6-440P-201ENST00000390882 HMX1Q9NP08 348 aaPredicted RBP3.42□□□□□ -1.86
RNU6-440P-201ENST00000390882 TIMELESSQ9UNS1 1208 aa3.42□□□□□ -1.86
RNU6-440P-201ENST00000390882 PCDHB11Q9Y5F2 797 aa3.42□□□□□ -1.86
RNU6-440P-201ENST00000390882 ITGB5P18084 799 aa3.41□□□□□ -1.86
RNU6-440P-201ENST00000390882 CBLL1Q75N03 491 aa3.41□□□□□ -1.86
RNU6-440P-201ENST00000390882 WWC1Q8IX03 1113 aa3.41□□□□□ -1.86
RNU6-440P-201ENST00000390882 EPS8L1Q8TE68 723 aa3.41□□□□□ -1.86
RNU6-440P-201ENST00000390882 GDPD2Q9HCC8 539 aa3.41□□□□□ -1.86
RNU6-440P-201ENST00000390882 JPH1Q9HDC5 661 aaPredicted RBP3.41□□□□□ -1.86
RNU6-440P-201ENST00000390882 STOML1Q9UBI4 398 aa3.41□□□□□ -1.86
RNU6-440P-201ENST00000390882 COG6Q9Y2V7 657 aa3.41□□□□□ -1.86
RNU6-440P-201ENST00000390882 PCDHB9Q9Y5E1 797 aa3.41□□□□□ -1.86
RNU6-440P-201ENST00000390882 NDUFB9Q9Y6M9 179 aa3.41□□□□□ -1.86
RNU6-440P-201ENST00000390882 TATP17735 454 aaPredicted RBP3.4□□□□□ -1.87
RNU6-440P-201ENST00000390882 ABL2P42684 1182 aa3.4□□□□□ -1.87
RNU6-440P-201ENST00000390882 AFF1P51825 1210 aaKnown RBP3.4□□□□□ -1.87
RNU6-440P-201ENST00000390882 KRTAP1-1Q07627 177 aa3.4□□□□□ -1.87
RNU6-440P-201ENST00000390882 PKN1Q16512 942 aa3.4□□□□□ -1.87
RNU6-440P-201ENST00000390882 NBPF1Q3BBV0 1214 aa3.4□□□□□ -1.87
RNU6-440P-201ENST00000390882 CLUAP1Q96AJ1 413 aa3.4□□□□□ -1.87
RNU6-440P-201ENST00000390882 POM121Q96HA1 1249 aa3.4□□□□□ -1.87
RNU6-440P-201ENST00000390882 NIFKQ9BYG3 293 aaKnown RBP3.4□□□□□ -1.87
RNU6-440P-201ENST00000390882 AKTIPQ9H8T0 292 aa3.4□□□□□ -1.87
RNU6-440P-201ENST00000390882 WASHC4Q2M389 1173 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms