RNA–Protein interactions for RNA: ENST00000390458.3

TRAV29DV5-201, Transcript of T cell receptor alpha variable 29/delta variable 5 (gene/pseudogene), humanhuman

APPRIS P1 BASIC

Gene TRAV29DV5, Length 469 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV29DV5-201ENST00000390458 CAMTA2O94983 1202 aa13.06□□□□□ -0.32
TRAV29DV5-201ENST00000390458 CHRNA5P30532 468 aa13.06□□□□□ -0.32
TRAV29DV5-201ENST00000390458 PDE6BP35913 854 aa13.06□□□□□ -0.32
TRAV29DV5-201ENST00000390458 FXR2P51116 673 aaKnown RBP eCLIP13.06□□□□□ -0.32
TRAV29DV5-201ENST00000390458 DCTN1Q14203 1278 aa13.06□□□□□ -0.32
TRAV29DV5-201ENST00000390458 TBC1D9BQ66K14 1250 aa13.06□□□□□ -0.32
TRAV29DV5-201ENST00000390458 DZIP3Q86Y13 1208 aaKnown RBP13.06□□□□□ -0.32
TRAV29DV5-201ENST00000390458 SETDB2Q96T68 719 aa13.06□□□□□ -0.32
TRAV29DV5-201ENST00000390458 BRIP1Q9BX63 1249 aa13.06□□□□□ -0.32
TRAV29DV5-201ENST00000390458 TBC1D2BQ9UPU7 963 aa13.06□□□□□ -0.32
TRAV29DV5-201ENST00000390458 ARFGEF2Q9Y6D5 1785 aa13.06□□□□□ -0.32
TRAV29DV5-201ENST00000390458 COL11A2P13942 1736 aaPredicted RBP13.05□□□□□ -0.32
TRAV29DV5-201ENST00000390458 SENP3-EIF4A1A0A087X0R7 540 aa13.05□□□□□ -0.32
TRAV29DV5-201ENST00000390458 LMOD3Q0VAK6 560 aa13.05□□□□□ -0.32
TRAV29DV5-201ENST00000390458 BICDL1Q6ZP65 573 aa13.05□□□□□ -0.32
TRAV29DV5-201ENST00000390458 TTLL6Q8N841 843 aa13.05□□□□□ -0.32
TRAV29DV5-201ENST00000390458 CNBD1Q8NA66 436 aa13.05□□□□□ -0.32
TRAV29DV5-201ENST00000390458 USP16Q9Y5T5 823 aa13.05□□□□□ -0.32
TRAV29DV5-201ENST00000390458 TNRC6CQ9HCJ0 1690 aaKnown RBP13.05□□□□□ -0.32
TRAV29DV5-201ENST00000390458 ST5P78524 1137 aa13.04□□□□□ -0.32
TRAV29DV5-201ENST00000390458 C2CD5Q86YS7 1000 aa13.04□□□□□ -0.32
TRAV29DV5-201ENST00000390458 ZNF526Q8TF50 670 aaPredicted RBP13.04□□□□□ -0.32
TRAV29DV5-201ENST00000390458 BABAM1Q9NWV8 329 aa13.04□□□□□ -0.32
TRAV29DV5-201ENST00000390458 NPHP1O15259 732 aa13.03□□□□□ -0.32
TRAV29DV5-201ENST00000390458 C9orf131Q5VYM1 1079 aa13.03□□□□□ -0.32
TRAV29DV5-201ENST00000390458 PRR5LQ6MZQ0 368 aa13.03□□□□□ -0.32
TRAV29DV5-201ENST00000390458 PRAMEF22A3QJZ6 481 aa13.02□□□□□ -0.33
TRAV29DV5-201ENST00000390458 DDX10Q13206 875 aaKnown RBP13.02□□□□□ -0.33
TRAV29DV5-201ENST00000390458 ERBB4Q15303 1308 aa13.02□□□□□ -0.33
TRAV29DV5-201ENST00000390458 KDM2BQ8NHM5 1336 aa13.02□□□□□ -0.33
TRAV29DV5-201ENST00000390458 TIAM2Q8IVF5 1701 aa13.02□□□□□ -0.33
TRAV29DV5-201ENST00000390458 NBPF26B4DH59 902 aa13.01□□□□□ -0.33
TRAV29DV5-201ENST00000390458 LMNB1P20700 586 aa13.01□□□□□ -0.33
TRAV29DV5-201ENST00000390458 EIF4A1P60842 406 aaKnown RBP13.01□□□□□ -0.33
TRAV29DV5-201ENST00000390458 NBPF10Q6P3W6 841 aaKnown RBP13.01□□□□□ -0.33
TRAV29DV5-201ENST00000390458 NBPF15Q8N660 670 aa13.01□□□□□ -0.33
TRAV29DV5-201ENST00000390458 RNF181Q9P0P0 153 aa13.01□□□□□ -0.33
TRAV29DV5-201ENST00000390458 FER1L6Q2WGJ9 1857 aa13.01□□□□□ -0.33
TRAV29DV5-201ENST00000390458 NUP98P52948 1817 aa13□□□□□ -0.33
TRAV29DV5-201ENST00000390458 ERVV-1B6SEH8 477 aa13□□□□□ -0.33
TRAV29DV5-201ENST00000390458 KIF3CO14782 793 aa13□□□□□ -0.33
TRAV29DV5-201ENST00000390458 SOGA3Q5TF21 947 aa13□□□□□ -0.33
TRAV29DV5-201ENST00000390458 STYK1Q6J9G0 422 aa13□□□□□ -0.33
TRAV29DV5-201ENST00000390458 NBPF5PQ86XG9 351 aaPredicted RBP13□□□□□ -0.33
TRAV29DV5-201ENST00000390458 SPDYE1Q8NFV5 336 aaPredicted RBP13□□□□□ -0.33
TRAV29DV5-201ENST00000390458 CNKSR1Q969H4 720 aa13□□□□□ -0.33
TRAV29DV5-201ENST00000390458 MIS18AQ9NYP9 233 aa13□□□□□ -0.33
TRAV29DV5-201ENST00000390458 CEP350Q5VT06 3117 aa13□□□□□ -0.33
TRAV29DV5-201ENST00000390458 DICER1Q9UPY3 1922 aaKnown RBP13□□□□□ -0.33
TRAV29DV5-201ENST00000390458 IBTKQ9P2D0 1353 aaPredicted RBP12.99□□□□□ -0.33
TRAV29DV5-201ENST00000390458 TOMM70O94826 608 aa12.99□□□□□ -0.33
TRAV29DV5-201ENST00000390458 PIP4K2AP48426 406 aaPredicted RBP12.99□□□□□ -0.33
TRAV29DV5-201ENST00000390458 RIPK4P57078 832 aa12.99□□□□□ -0.33
TRAV29DV5-201ENST00000390458 WDR43Q15061 677 aaKnown RBP eCLIP12.99□□□□□ -0.33
TRAV29DV5-201ENST00000390458 TPTE2Q6XPS3 522 aa12.99□□□□□ -0.33
TRAV29DV5-201ENST00000390458 MASTLQ96GX5 879 aa12.99□□□□□ -0.33
TRAV29DV5-201ENST00000390458 CACNA1SQ13698 1873 aa12.99□□□□□ -0.33
TRAV29DV5-201ENST00000390458 CCDC88AQ3V6T2 1871 aa12.99□□□□□ -0.33
TRAV29DV5-201ENST00000390458 LTBP3Q9NS15 1303 aa12.98□□□□□ -0.33
TRAV29DV5-201ENST00000390458 SRGNP10124 158 aa12.98□□□□□ -0.33
TRAV29DV5-201ENST00000390458 HSPA6P17066 643 aa12.98□□□□□ -0.33
TRAV29DV5-201ENST00000390458 TMPOP42166 694 aaKnown RBP12.98□□□□□ -0.33
TRAV29DV5-201ENST00000390458 KIF6Q6ZMV9 814 aa12.98□□□□□ -0.33
TRAV29DV5-201ENST00000390458 SP7Q8TDD2 431 aaPredicted RBP12.98□□□□□ -0.33
TRAV29DV5-201ENST00000390458 ZNF622Q969S3 477 aaKnown RBP eCLIP12.98□□□□□ -0.33
TRAV29DV5-201ENST00000390458 THUMPD2Q9BTF0 503 aaKnown RBP12.98□□□□□ -0.33
TRAV29DV5-201ENST00000390458 TSPYL4Q9UJ04 414 aa12.98□□□□□ -0.33
TRAV29DV5-201ENST00000390458 NIP7Q9Y221 180 aaKnown RBP eCLIP12.98□□□□□ -0.33
TRAV29DV5-201ENST00000390458 CLEC11AQ9Y240 323 aa12.98□□□□□ -0.33
TRAV29DV5-201ENST00000390458 SSUH2Q9Y2M2 353 aa12.98□□□□□ -0.33
TRAV29DV5-201ENST00000390458 RIC1Q4ADV7 1423 aa12.97□□□□□ -0.33
TRAV29DV5-201ENST00000390458 MAP3K15Q6ZN16 1313 aa12.97□□□□□ -0.33
TRAV29DV5-201ENST00000390458 KLRG2A4D1S0 409 aaPredicted RBP12.97□□□□□ -0.33
TRAV29DV5-201ENST00000390458 HAX1O00165 279 aa12.97□□□□□ -0.33
TRAV29DV5-201ENST00000390458 RUNDC1Q96C34 613 aa12.97□□□□□ -0.33
TRAV29DV5-201ENST00000390458 NYXQ9GZU5 481 aa12.97□□□□□ -0.33
TRAV29DV5-201ENST00000390458 SLX4Q8IY92 1834 aa12.97□□□□□ -0.33
TRAV29DV5-201ENST00000390458 RBM46Q8TBY0 533 aaKnown RBP12.96□□□□□ -0.33
TRAV29DV5-201ENST00000390458 PRKRIP1Q9H875 184 aaPredicted RBP12.96□□□□□ -0.33
TRAV29DV5-201ENST00000390458 NFKBIEO00221 500 aa12.95□□□□□ -0.34
TRAV29DV5-201ENST00000390458 NPR1P16066 1061 aa12.95□□□□□ -0.34
TRAV29DV5-201ENST00000390458 RASSF7Q02833 373 aa12.95□□□□□ -0.34
TRAV29DV5-201ENST00000390458 PRPF40BQ6NWY9 871 aaKnown RBP12.95□□□□□ -0.34
TRAV29DV5-201ENST00000390458 C16orf71Q8IYS4 520 aaPredicted RBP12.95□□□□□ -0.34
TRAV29DV5-201ENST00000390458 TAOK3Q9H2K8 898 aa12.95□□□□□ -0.34
TRAV29DV5-201ENST00000390458 NMRK2Q9NPI5 230 aa12.95□□□□□ -0.34
TRAV29DV5-201ENST00000390458 ANKRD36CQ5JPF3 1778 aa12.94□□□□□ -0.34
TRAV29DV5-201ENST00000390458 C21orf2O43822 256 aa12.94□□□□□ -0.34
TRAV29DV5-201ENST00000390458 GTF2E1P29083 439 aaPredicted RBP12.94□□□□□ -0.34
TRAV29DV5-201ENST00000390458 ZEB1P37275 1124 aaPredicted RBP12.94□□□□□ -0.34
TRAV29DV5-201ENST00000390458 RRP7AQ9Y3A4 280 aaKnown RBP12.94□□□□□ -0.34
TRAV29DV5-201ENST00000390458 WDR90Q96KV7 1748 aa12.93□□□□□ -0.34
TRAV29DV5-201ENST00000390458 GLTPD2A6NH11 291 aa12.93□□□□□ -0.34
TRAV29DV5-201ENST00000390458 HOXB7P09629 217 aa12.93□□□□□ -0.34
TRAV29DV5-201ENST00000390458 ALDH1B1P30837 517 aa12.93□□□□□ -0.34
TRAV29DV5-201ENST00000390458 APLP1P51693 650 aa12.93□□□□□ -0.34
TRAV29DV5-201ENST00000390458 FSTL1Q12841 308 aa12.93□□□□□ -0.34
TRAV29DV5-201ENST00000390458 HLFQ16534 295 aa12.93□□□□□ -0.34
TRAV29DV5-201ENST00000390458 CCDC24Q8N4L8 307 aa12.93□□□□□ -0.34
TRAV29DV5-201ENST00000390458 RNF123Q5XPI4 1314 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms