RNA–Protein interactions for RNA: ENST00000388835.3

KRT18-201, Transcript of keratin 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT18, Length 1,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18-201ENST00000388835 NGEFQ8N5V2 710 aa33.74■■■□□ 2.99
KRT18-201ENST00000388835 CCDC88AQ3V6T2 1871 aa33.74■■■□□ 2.99
KRT18-201ENST00000388835 CACNA1SQ13698 1873 aa33.72■■■□□ 2.99
KRT18-201ENST00000388835 MYBBP1AQ9BQG0 1328 aaKnown RBP33.72■■■□□ 2.99
KRT18-201ENST00000388835 PRELPP51888 382 aa33.72■■■□□ 2.99
KRT18-201ENST00000388835 RIPK4P57078 832 aa33.72■■■□□ 2.99
KRT18-201ENST00000388835 NIP7Q9Y221 180 aaKnown RBP eCLIP33.72■■■□□ 2.99
KRT18-201ENST00000388835 C21orf2O43822 256 aa33.71■■■□□ 2.99
KRT18-201ENST00000388835 LMNB1P20700 586 aa33.71■■■□□ 2.99
KRT18-201ENST00000388835 KDM2BQ8NHM5 1336 aa33.71■■■□□ 2.99
KRT18-201ENST00000388835 FAM177BA6PVY3 158 aa33.7■■■□□ 2.99
KRT18-201ENST00000388835 TOMM70O94826 608 aa33.7■■■□□ 2.99
KRT18-201ENST00000388835 HLFQ16534 295 aa33.7■■■□□ 2.99
KRT18-201ENST00000388835 RRP7AQ9Y3A4 280 aaKnown RBP33.7■■■□□ 2.99
KRT18-201ENST00000388835 CEP350Q5VT06 3117 aa33.7■■■□□ 2.98
KRT18-201ENST00000388835 NFKBIEO00221 500 aa33.69■■■□□ 2.98
KRT18-201ENST00000388835 TSPYL4Q9UJ04 414 aa33.68■■■□□ 2.98
KRT18-201ENST00000388835 SRGNP10124 158 aa33.67■■■□□ 2.98
KRT18-201ENST00000388835 MYL6BP14649 208 aa33.67■■■□□ 2.98
KRT18-201ENST00000388835 RRAGCQ9HB90 399 aa33.67■■■□□ 2.98
KRT18-201ENST00000388835 SLX4Q8IY92 1834 aa33.67■■■□□ 2.98
KRT18-201ENST00000388835 STYK1Q6J9G0 422 aa33.66■■■□□ 2.98
KRT18-201ENST00000388835 CCDC146Q8IYE0 955 aa33.66■■■□□ 2.98
KRT18-201ENST00000388835 C16orf71Q8IYS4 520 aaPredicted RBP33.66■■■□□ 2.98
KRT18-201ENST00000388835 TMPOP42166 694 aaKnown RBP33.65■■■□□ 2.98
KRT18-201ENST00000388835 TPTE2Q6XPS3 522 aa33.65■■■□□ 2.98
KRT18-201ENST00000388835 CNKSR1Q969H4 720 aa33.65■■■□□ 2.98
KRT18-201ENST00000388835 TIAM2Q8IVF5 1701 aa33.64■■■□□ 2.98
KRT18-201ENST00000388835 MASTLQ96GX5 879 aa33.64■■■□□ 2.98
KRT18-201ENST00000388835 RGL2O15211 777 aa33.64■■■□□ 2.98
KRT18-201ENST00000388835 FER1L6Q2WGJ9 1857 aa33.63■■■□□ 2.97
KRT18-201ENST00000388835 NEUROD2Q15784 382 aa33.63■■■□□ 2.97
KRT18-201ENST00000388835 PRPF40BQ6NWY9 871 aaKnown RBP33.63■■■□□ 2.97
KRT18-201ENST00000388835 TTLL7Q6ZT98 887 aa33.63■■■□□ 2.97
KRT18-201ENST00000388835 TNRC6CQ9HCJ0 1690 aaKnown RBP33.63■■■□□ 2.97
KRT18-201ENST00000388835 NUP98P52948 1817 aa33.62■■■□□ 2.97
KRT18-201ENST00000388835 ZC3H4Q9UPT8 1303 aaKnown RBP33.61■■■□□ 2.97
KRT18-201ENST00000388835 KIF6Q6ZMV9 814 aa33.61■■■□□ 2.97
KRT18-201ENST00000388835 ARFGEF2Q9Y6D5 1785 aa33.6■■■□□ 2.97
KRT18-201ENST00000388835 LMOD3Q0VAK6 560 aa33.6■■■□□ 2.97
KRT18-201ENST00000388835 WDR43Q15061 677 aaKnown RBP eCLIP33.6■■■□□ 2.973e-6■□□□□ 9
KRT18-201ENST00000388835 MAP3K15Q6ZN16 1313 aa33.6■■■□□ 2.97
KRT18-201ENST00000388835 GTF2E1P29083 439 aaPredicted RBP33.6■■■□□ 2.97
KRT18-201ENST00000388835 RBM46Q8TBY0 533 aaKnown RBP33.59■■■□□ 2.97
KRT18-201ENST00000388835 ZBTB3Q9H5J0 574 aa33.59■■■□□ 2.97
KRT18-201ENST00000388835 ERVV-1B6SEH8 477 aa33.58■■■□□ 2.97
KRT18-201ENST00000388835 NPR1P16066 1061 aa33.57■■■□□ 2.96
KRT18-201ENST00000388835 EIF2S2P20042 333 aaKnown RBP33.57■■■□□ 2.96
KRT18-201ENST00000388835 GLTPD2A6NH11 291 aa33.56■■■□□ 2.96
KRT18-201ENST00000388835 TAOK3Q9H2K8 898 aa33.55■■■□□ 2.96
KRT18-201ENST00000388835 DICER1Q9UPY3 1922 aaKnown RBP33.55■■■□□ 2.96
KRT18-201ENST00000388835 GPTP24298 496 aa33.55■■■□□ 2.96
KRT18-201ENST00000388835 ERFEQ4G0M1 354 aa33.55■■■□□ 2.96
KRT18-201ENST00000388835 RUNDC1Q96C34 613 aa33.55■■■□□ 2.96
KRT18-201ENST00000388835 NUTM1Q86Y26 1132 aa33.54■■■□□ 2.96
KRT18-201ENST00000388835 KLRG2A4D1S0 409 aaPredicted RBP33.53■■■□□ 2.96
KRT18-201ENST00000388835 APLP1P51693 650 aa33.53■■■□□ 2.96
KRT18-201ENST00000388835 SOGA3Q5TF21 947 aa33.53■■■□□ 2.96
KRT18-201ENST00000388835 BABAM1Q9NWV8 329 aa33.53■■■□□ 2.96
KRT18-201ENST00000388835 ADAMTS8Q9UP79 889 aa33.53■■■□□ 2.96
KRT18-201ENST00000388835 ERBB4Q15303 1308 aa33.53■■■□□ 2.96
KRT18-201ENST00000388835 NYXQ9GZU5 481 aa33.52■■■□□ 2.96
KRT18-201ENST00000388835 LTBP3Q9NS15 1303 aa33.52■■■□□ 2.96
KRT18-201ENST00000388835 PRKRIP1Q9H875 184 aaPredicted RBP33.51■■■□□ 2.96
KRT18-201ENST00000388835 LAS1LQ9Y4W2 734 aaKnown RBP33.51■■■□□ 2.96
KRT18-201ENST00000388835 ABCC12Q96J65 1359 aa33.51■■■□□ 2.95
KRT18-201ENST00000388835 ANXA1P04083 346 aa33.51■■■□□ 2.95
KRT18-201ENST00000388835 NECTIN2Q92692 538 aa33.51■■■□□ 2.95
KRT18-201ENST00000388835 C7orf43Q8WVR3 580 aa33.5■■■□□ 2.95
KRT18-201ENST00000388835 UBN2Q6ZU65 1347 aa33.5■■■□□ 2.95
KRT18-201ENST00000388835 PDIA6Q15084 440 aa33.49■■■□□ 2.95
KRT18-201ENST00000388835 PROSER3Q2NL68 480 aa33.49■■■□□ 2.95
KRT18-201ENST00000388835 DPY19L2Q6NUT2 758 aa33.49■■■□□ 2.95
KRT18-201ENST00000388835 TRIM35Q9UPQ4 493 aa33.49■■■□□ 2.95
KRT18-201ENST00000388835 VEGFAP15692 232 aaPredicted RBP33.48■■■□□ 2.95
KRT18-201ENST00000388835 FSTL1Q12841 308 aa33.48■■■□□ 2.95
KRT18-201ENST00000388835 CCDC93Q567U6 631 aa33.48■■■□□ 2.95
KRT18-201ENST00000388835 OLFM4Q6UX06 510 aa33.48■■■□□ 2.95
KRT18-201ENST00000388835 SUSD4Q5VX71 490 aa33.47■■■□□ 2.95
KRT18-201ENST00000388835 GIGYF2Q6Y7W6 1299 aaKnown RBP33.47■■■□□ 2.95
KRT18-201ENST00000388835 LRP10Q7Z4F1 713 aa33.47■■■□□ 2.95
KRT18-201ENST00000388835 KRT24Q2M2I5 525 aa33.46■■■□□ 2.95
KRT18-201ENST00000388835 ZNF34Q8IZ26 560 aa33.46■■■□□ 2.95
KRT18-201ENST00000388835 CHL1O00533 1208 aa33.44■■■□□ 2.94
KRT18-201ENST00000388835 ALDH1B1P30837 517 aa33.44■■■□□ 2.94
KRT18-201ENST00000388835 SMC1BQ8NDV3 1235 aa33.43■■■□□ 2.94
KRT18-201ENST00000388835 WDR90Q96KV7 1748 aa33.42■■■□□ 2.94
KRT18-201ENST00000388835 AIMP1Q12904 312 aaKnown RBP33.42■■■□□ 2.94
KRT18-201ENST00000388835 CRY2Q49AN0 593 aa33.42■■■□□ 2.94
KRT18-201ENST00000388835 IBTKQ9P2D0 1353 aaPredicted RBP33.41■■■□□ 2.94
KRT18-201ENST00000388835 POTECB2RU33 542 aa33.41■■■□□ 2.94
KRT18-201ENST00000388835 HTRA3P83110 453 aa33.41■■■□□ 2.94
KRT18-201ENST00000388835 FKBP4Q02790 459 aaKnown RBP eCLIP33.41■■■□□ 2.94
KRT18-201ENST00000388835 ZNF277Q9NRM2 450 aaPredicted RBP33.41■■■□□ 2.94
KRT18-201ENST00000388835 NTSR2O95665 410 aa33.4■■■□□ 2.94
KRT18-201ENST00000388835 RPGRQ92834 1020 aaKnown RBP33.4■■■□□ 2.94
KRT18-201ENST00000388835 DDNO94850 711 aaPredicted RBP33.39■■■□□ 2.94
KRT18-201ENST00000388835 COPS6Q7L5N1 327 aa33.39■■■□□ 2.94
KRT18-201ENST00000388835 PPP1R42Q7Z4L9 355 aa33.39■■■□□ 2.94
KRT18-201ENST00000388835 RTKN2Q8IZC4 609 aa33.38■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms