RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 STIM1Q13586 685 aa12.4□□□□□ -0.43
CLCN4-202ENST00000380833 ZNF396Q96N95 335 aaPredicted RBP12.4□□□□□ -0.43
CLCN4-202ENST00000380833 PRKRIP1Q9H875 184 aaPredicted RBP12.4□□□□□ -0.43
CLCN4-202ENST00000380833 PUF60Q9UHX1 559 aaKnown RBP12.4□□□□□ -0.43
CLCN4-202ENST00000380833 MIA2Q96PC5 1412 aa12.39□□□□□ -0.43
CLCN4-202ENST00000380833 INPP5BP32019 993 aa12.39□□□□□ -0.43
CLCN4-202ENST00000380833 UVSSAQ2YD98 709 aa12.39□□□□□ -0.43
CLCN4-202ENST00000380833 B4GALNT4Q76KP1 1039 aa12.39□□□□□ -0.43
CLCN4-202ENST00000380833 TCP11L2Q8N4U5 519 aa12.39□□□□□ -0.43
CLCN4-202ENST00000380833 ACSBG1Q96GR2 724 aa12.39□□□□□ -0.43
CLCN4-202ENST00000380833 RANBP6O60518 1105 aaKnown RBP12.39□□□□□ -0.43
CLCN4-202ENST00000380833 GAPVD1Q14C86 1478 aa12.39□□□□□ -0.43
CLCN4-202ENST00000380833 EPB41L2O43491 1005 aaKnown RBP12.39□□□□□ -0.43
CLCN4-202ENST00000380833 CCDC38Q502W7 563 aa12.39□□□□□ -0.43
CLCN4-202ENST00000380833 CCDC196A0A1B0GTZ2 297 aa12.39□□□□□ -0.43
CLCN4-202ENST00000380833 SRGAP3O43295 1099 aa12.39□□□□□ -0.43
CLCN4-202ENST00000380833 TACC1O75410 805 aa12.39□□□□□ -0.43
CLCN4-202ENST00000380833 PPP4R3AQ6IN85 833 aa12.39□□□□□ -0.43
CLCN4-202ENST00000380833 DNAI2Q9GZS0 605 aa12.39□□□□□ -0.43
CLCN4-202ENST00000380833 TMOD3Q9NYL9 352 aa12.39□□□□□ -0.43
CLCN4-202ENST00000380833 HSF2BPO75031 334 aa12.39□□□□□ -0.43
CLCN4-202ENST00000380833 CEP57L1Q8IYX8 460 aa12.39□□□□□ -0.43
CLCN4-202ENST00000380833 NUP62CLQ9H1M0 184 aa12.39□□□□□ -0.43
CLCN4-202ENST00000380833 CLIP2Q9UDT6 1046 aa12.39□□□□□ -0.43
CLCN4-202ENST00000380833 SEC63Q9UGP8 760 aaKnown RBP12.39□□□□□ -0.43
CLCN4-202ENST00000380833 CEP104O60308 925 aa12.38□□□□□ -0.43
CLCN4-202ENST00000380833 GNAI3P08754 354 aa12.38□□□□□ -0.43
CLCN4-202ENST00000380833 PCK1P35558 622 aa12.38□□□□□ -0.43
CLCN4-202ENST00000380833 KIF4BQ2VIQ3 1234 aa12.38□□□□□ -0.43
CLCN4-202ENST00000380833 TRIM4Q9C037 500 aa12.38□□□□□ -0.43
CLCN4-202ENST00000380833 SAMM50Q9Y512 469 aa12.38□□□□□ -0.43
CLCN4-202ENST00000380833 PEX19P40855 299 aa12.38□□□□□ -0.43
CLCN4-202ENST00000380833 MYD88Q99836 296 aa12.38□□□□□ -0.43
CLCN4-202ENST00000380833 PPP1R12BO60237 982 aaPredicted RBP12.38□□□□□ -0.43
CLCN4-202ENST00000380833 MAP3K9P80192 1104 aa12.38□□□□□ -0.43
CLCN4-202ENST00000380833 SLC12A5Q9H2X9 1139 aa12.38□□□□□ -0.43
CLCN4-202ENST00000380833 SMTNL1A8MU46 457 aa12.38□□□□□ -0.43
CLCN4-202ENST00000380833 DESP17661 470 aa12.38□□□□□ -0.43
CLCN4-202ENST00000380833 VEZTQ9HBM0 779 aa12.38□□□□□ -0.43
CLCN4-202ENST00000380833 EIF5P55010 431 aaKnown RBP12.38□□□□□ -0.43
CLCN4-202ENST00000380833 LACTBP83111 547 aaPredicted RBP12.38□□□□□ -0.43
CLCN4-202ENST00000380833 JAKMIP1Q96N16 626 aaKnown RBP12.38□□□□□ -0.43
CLCN4-202ENST00000380833 PDE1CQ14123 709 aaPredicted RBP12.38□□□□□ -0.43
CLCN4-202ENST00000380833 BMP2KQ9NSY1 1161 aaPredicted RBP12.38□□□□□ -0.43
CLCN4-202ENST00000380833 CYP46A1Q9Y6A2 500 aa12.38□□□□□ -0.43
CLCN4-202ENST00000380833 DDX12PQ92771 950 aa12.37□□□□□ -0.43
CLCN4-202ENST00000380833 ZBTB9Q96C00 473 aa12.37□□□□□ -0.43
CLCN4-202ENST00000380833 PDCP20941 246 aa12.37□□□□□ -0.43
CLCN4-202ENST00000380833 RAPGEF3O95398 923 aa12.37□□□□□ -0.43
CLCN4-202ENST00000380833 DPH6Q7L8W6 267 aa12.37□□□□□ -0.43
CLCN4-202ENST00000380833 MRFAP1Q9Y605 127 aa12.37□□□□□ -0.43
CLCN4-202ENST00000380833 OPA1O60313 960 aa12.37□□□□□ -0.43
CLCN4-202ENST00000380833 UBE4AQ14139 1066 aa12.37□□□□□ -0.43
CLCN4-202ENST00000380833 ZKSCAN8Q15776 578 aaPredicted RBP12.37□□□□□ -0.43
CLCN4-202ENST00000380833 CEP126Q9P2H0 1117 aa12.37□□□□□ -0.43
CLCN4-202ENST00000380833 NOL7Q9UMY1 257 aaKnown RBP12.37□□□□□ -0.43
CLCN4-202ENST00000380833 SLU7O95391 586 aaKnown RBP12.37□□□□□ -0.43
CLCN4-202ENST00000380833 GSDMDP57764 484 aa12.37□□□□□ -0.43
CLCN4-202ENST00000380833 CCDC183Q5T5S1 534 aa12.37□□□□□ -0.43
CLCN4-202ENST00000380833 THUMPD2Q9BTF0 503 aaKnown RBP12.37□□□□□ -0.43
CLCN4-202ENST00000380833 IRAK4Q9NWZ3 460 aa12.37□□□□□ -0.43
CLCN4-202ENST00000380833 BIN2Q9UBW5 565 aaPredicted RBP12.37□□□□□ -0.43
CLCN4-202ENST00000380833 SATB2Q9UPW6 733 aa12.37□□□□□ -0.43
CLCN4-202ENST00000380833 ADCY5O95622 1261 aa12.36□□□□□ -0.43
CLCN4-202ENST00000380833 CCDC83Q8IWF9 413 aa12.36□□□□□ -0.43
CLCN4-202ENST00000380833 ARMCX6Q7L4S7 300 aa12.36□□□□□ -0.43
CLCN4-202ENST00000380833 SMARCA5O60264 1052 aaPredicted RBP12.36□□□□□ -0.43
CLCN4-202ENST00000380833 TNIP1Q15025 636 aa12.36□□□□□ -0.43
CLCN4-202ENST00000380833 ANKLE2Q86XL3 938 aa12.36□□□□□ -0.43
CLCN4-202ENST00000380833 USP25Q9UHP3 1055 aa12.36□□□□□ -0.43
CLCN4-202ENST00000380833 SMARCA4P51532 1647 aa12.36□□□□□ -0.43
CLCN4-202ENST00000380833 MAP7Q14244 749 aa12.36□□□□□ -0.43
CLCN4-202ENST00000380833 MAP3K11Q16584 847 aa12.36□□□□□ -0.43
CLCN4-202ENST00000380833 ATRIPQ8WXE1 791 aa12.36□□□□□ -0.43
CLCN4-202ENST00000380833 UPF3BQ9BZI7 483 aaKnown RBP12.36□□□□□ -0.43
CLCN4-202ENST00000380833 SRCIN1Q9C0H9 1055 aa12.36□□□□□ -0.43
CLCN4-202ENST00000380833 TSPYL2Q9H2G4 693 aaPredicted RBP12.36□□□□□ -0.43
CLCN4-202ENST00000380833 TRMT1Q9NXH9 659 aaKnown RBP12.36□□□□□ -0.43
CLCN4-202ENST00000380833 RAPGEF2Q9Y4G8 1499 aa12.36□□□□□ -0.43
CLCN4-202ENST00000380833 ATP11AP98196 1134 aa12.36□□□□□ -0.43
CLCN4-202ENST00000380833 PLS1Q14651 629 aa12.36□□□□□ -0.43
CLCN4-202ENST00000380833 MKRN1Q9UHC7 482 aaKnown RBP12.36□□□□□ -0.43
CLCN4-202ENST00000380833 NCAPD3P42695 1498 aa12.36□□□□□ -0.43
CLCN4-202ENST00000380833 TRIM21P19474 475 aaKnown RBP12.35□□□□□ -0.43
CLCN4-202ENST00000380833 U2AF2P26368 475 aaKnown RBP eCLIP12.35□□□□□ -0.43
CLCN4-202ENST00000380833 MCM10Q7L590 875 aa12.35□□□□□ -0.43
CLCN4-202ENST00000380833 PDZRN3Q9UPQ7 1066 aa12.35□□□□□ -0.43
CLCN4-202ENST00000380833 ARL1P40616 181 aaPredicted RBP12.35□□□□□ -0.43
CLCN4-202ENST00000380833 CAVIN4Q5BKX8 364 aa12.35□□□□□ -0.43
CLCN4-202ENST00000380833 LARP1BQ659C4 914 aaKnown RBP12.35□□□□□ -0.43
CLCN4-202ENST00000380833 THEMISQ8N1K5 641 aaPredicted RBP12.35□□□□□ -0.43
CLCN4-202ENST00000380833 MRPS9P82933 396 aaKnown RBP12.35□□□□□ -0.43
CLCN4-202ENST00000380833 CCDC174Q6PII3 467 aa12.35□□□□□ -0.43
CLCN4-202ENST00000380833 SLMAPQ14BN4 828 aa12.35□□□□□ -0.43
CLCN4-202ENST00000380833 MICAL1Q8TDZ2 1067 aa12.35□□□□□ -0.43
CLCN4-202ENST00000380833 ANKRD18BA2A2Z9 1011 aa12.35□□□□□ -0.43
CLCN4-202ENST00000380833 GBP1P32455 592 aa12.35□□□□□ -0.43
CLCN4-202ENST00000380833 HDAC1Q13547 482 aaPredicted RBP12.35□□□□□ -0.43
CLCN4-202ENST00000380833 TSNAXIP1Q2TAA8 658 aa12.35□□□□□ -0.43
CLCN4-202ENST00000380833 CACNA2D3Q8IZS8 1091 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms