RNA–Protein interactions for RNA: ENST00000379792.6

HERPUD1-203, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5 BASIC

Gene HERPUD1, Length 1,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-203ENST00000379792 ABCC4O15439 1325 aa17.9■□□□□ 0.46
HERPUD1-203ENST00000379792 DDX58O95786 925 aaKnown RBP17.9■□□□□ 0.46
HERPUD1-203ENST00000379792 EIF5P55010 431 aaKnown RBP17.9■□□□□ 0.46
HERPUD1-203ENST00000379792 ITPRIPQ8IWB1 547 aa17.9■□□□□ 0.46
HERPUD1-203ENST00000379792 ZBTB3Q9H5J0 574 aa17.9■□□□□ 0.46
HERPUD1-203ENST00000379792 TBC1D2BQ9UPU7 963 aa17.9■□□□□ 0.46
HERPUD1-203ENST00000379792 GTF3C3Q9Y5Q9 886 aa17.9■□□□□ 0.46
HERPUD1-203ENST00000379792 MYH14Q7Z406 1995 aaKnown RBP17.9■□□□□ 0.46
HERPUD1-203ENST00000379792 COL5A3P25940 1745 aaPredicted RBP17.9■□□□□ 0.46
HERPUD1-203ENST00000379792 CACNA1FO60840 1977 aa17.89■□□□□ 0.46
HERPUD1-203ENST00000379792 NPM2Q86SE8 214 aaKnown RBP17.89■□□□□ 0.45
HERPUD1-203ENST00000379792 AMIGO3Q86WK7 504 aa17.89■□□□□ 0.45
HERPUD1-203ENST00000379792 DNAAF4Q8WXU2 420 aa17.89■□□□□ 0.45
HERPUD1-203ENST00000379792 AK7Q96M32 723 aa17.89■□□□□ 0.45
HERPUD1-203ENST00000379792 LRP5O75197 1615 aa17.88■□□□□ 0.45
HERPUD1-203ENST00000379792 RPS6KA4O75676 772 aa17.88■□□□□ 0.45
HERPUD1-203ENST00000379792 DZIP3Q86Y13 1208 aaKnown RBP17.88■□□□□ 0.45
HERPUD1-203ENST00000379792 PLBD2Q8NHP8 589 aa17.88■□□□□ 0.45
HERPUD1-203ENST00000379792 PHF14O94880 888 aa17.87■□□□□ 0.45
HERPUD1-203ENST00000379792 MVPQ14764 893 aaKnown RBP17.87■□□□□ 0.45
HERPUD1-203ENST00000379792 KIF6Q6ZMV9 814 aa17.87■□□□□ 0.45
HERPUD1-203ENST00000379792 TAF1LQ8IZX4 1826 aa17.87■□□□□ 0.45
HERPUD1-203ENST00000379792 INTS3Q68E01 1043 aaKnown RBP17.86■□□□□ 0.45
HERPUD1-203ENST00000379792 ANO8Q9HCE9 1232 aaPredicted RBP17.86■□□□□ 0.45
HERPUD1-203ENST00000379792 RTCBQ9Y3I0 505 aaKnown RBP17.86■□□□□ 0.45
HERPUD1-203ENST00000379792 C4BP0C0L5 1744 aa17.86■□□□□ 0.45
HERPUD1-203ENST00000379792 COL15A1P39059 1388 aa17.86■□□□□ 0.45
HERPUD1-203ENST00000379792 MYD88Q99836 296 aa17.86■□□□□ 0.45
HERPUD1-203ENST00000379792 SRCAPQ6ZRS2 3230 aa17.85■□□□□ 0.45
HERPUD1-203ENST00000379792 CCT4P50991 539 aaKnown RBP17.85■□□□□ 0.45
HERPUD1-203ENST00000379792 HLFQ16534 295 aa17.85■□□□□ 0.45
HERPUD1-203ENST00000379792 ZNF827Q17R98 1081 aa17.85■□□□□ 0.45
HERPUD1-203ENST00000379792 BEND3Q5T5X7 828 aa17.85■□□□□ 0.45
HERPUD1-203ENST00000379792 METTL22Q9BUU2 404 aaPredicted RBP17.85■□□□□ 0.45
HERPUD1-203ENST00000379792 STK32BQ9NY57 414 aa17.85■□□□□ 0.45
HERPUD1-203ENST00000379792 MAP3K15Q6ZN16 1313 aa17.85■□□□□ 0.45
HERPUD1-203ENST00000379792 ATP5J2-PTCD1G3V325 749 aa17.84■□□□□ 0.45
HERPUD1-203ENST00000379792 CWF19L2Q2TBE0 894 aaKnown RBP17.84■□□□□ 0.45
HERPUD1-203ENST00000379792 SLC15A2Q16348 729 aa17.84■□□□□ 0.45
HERPUD1-203ENST00000379792 SRCIN1Q9C0H9 1055 aa17.84■□□□□ 0.45
HERPUD1-203ENST00000379792 IGKV5-2P06315 115 aa17.83■□□□□ 0.44
HERPUD1-203ENST00000379792 ARHGEF1Q92888 912 aaKnown RBP17.83■□□□□ 0.44
HERPUD1-203ENST00000379792 SRP68Q9UHB9 627 aaKnown RBP17.83■□□□□ 0.44
HERPUD1-203ENST00000379792 A0A087WZG4 1122 aa17.82■□□□□ 0.44
HERPUD1-203ENST00000379792 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.82■□□□□ 0.44
HERPUD1-203ENST00000379792 CAMTA2O94983 1202 aa17.82■□□□□ 0.44
HERPUD1-203ENST00000379792 HMGB2P26583 209 aaKnown RBP17.82■□□□□ 0.44
HERPUD1-203ENST00000379792 NEXNQ0ZGT2 675 aa17.82■□□□□ 0.44
HERPUD1-203ENST00000379792 TRAPPC3LQ5T215 181 aa17.82■□□□□ 0.44
HERPUD1-203ENST00000379792 AKT1S1Q96B36 256 aa17.82■□□□□ 0.44
HERPUD1-203ENST00000379792 TFCP2L1Q9NZI6 479 aa17.82■□□□□ 0.44
HERPUD1-203ENST00000379792 DDX19BQ9UMR2 479 aa17.82■□□□□ 0.44
HERPUD1-203ENST00000379792 ZBTB7BO15156 539 aaPredicted RBP17.81■□□□□ 0.44
HERPUD1-203ENST00000379792 LINS1Q8NG48 757 aa17.81■□□□□ 0.44
HERPUD1-203ENST00000379792 ERVV-1B6SEH8 477 aa17.81■□□□□ 0.44
HERPUD1-203ENST00000379792 GIGYF2Q6Y7W6 1299 aaKnown RBP17.81■□□□□ 0.44
HERPUD1-203ENST00000379792 MEIS3Q99687 375 aa17.81■□□□□ 0.44
HERPUD1-203ENST00000379792 CASZ1Q86V15 1759 aa17.8■□□□□ 0.44
HERPUD1-203ENST00000379792 NEURL1BA8MQ27 555 aa17.8■□□□□ 0.44
HERPUD1-203ENST00000379792 GPTP24298 496 aa17.8■□□□□ 0.44
HERPUD1-203ENST00000379792 RFC4P35249 363 aa17.8■□□□□ 0.44
HERPUD1-203ENST00000379792 TCIRG1Q13488 830 aa17.8■□□□□ 0.44
HERPUD1-203ENST00000379792 PXDNLA1KZ92 1463 aa17.8■□□□□ 0.44
HERPUD1-203ENST00000379792 USPL1Q5W0Q7 1092 aa17.79■□□□□ 0.44
HERPUD1-203ENST00000379792 JARID2Q92833 1246 aaPredicted RBP17.79■□□□□ 0.44
HERPUD1-203ENST00000379792 ATP10DQ9P241 1426 aa17.79■□□□□ 0.44
HERPUD1-203ENST00000379792 ARFGEF2Q9Y6D5 1785 aa17.79■□□□□ 0.44
HERPUD1-203ENST00000379792 ZPR1O75312 459 aa17.79■□□□□ 0.44
HERPUD1-203ENST00000379792 ALDH1L1O75891 902 aa17.79■□□□□ 0.44
HERPUD1-203ENST00000379792 USP44Q9H0E7 712 aa17.79■□□□□ 0.44
HERPUD1-203ENST00000379792 C1orf115Q9H7X2 142 aa17.79■□□□□ 0.44
HERPUD1-203ENST00000379792 NARFQ9UHQ1 456 aa17.79■□□□□ 0.44
HERPUD1-203ENST00000379792 SSFA2P28290 1259 aa17.78■□□□□ 0.44
HERPUD1-203ENST00000379792 BCL2L12Q9HB09 334 aa17.78■□□□□ 0.44
HERPUD1-203ENST00000379792 ZBTB40Q9NUA8 1239 aa17.78■□□□□ 0.44
HERPUD1-203ENST00000379792 MSH5O43196 834 aa17.77■□□□□ 0.44
HERPUD1-203ENST00000379792 ADRA2BP18089 450 aa17.77■□□□□ 0.44
HERPUD1-203ENST00000379792 ISCA1Q9BUE6 129 aa17.77■□□□□ 0.44
HERPUD1-203ENST00000379792 SPON1Q9HCB6 807 aa17.77■□□□□ 0.44
HERPUD1-203ENST00000379792 NBPF7P0C2Y1 421 aaPredicted RBP17.76■□□□□ 0.43
HERPUD1-203ENST00000379792 GCKRQ14397 625 aa17.76■□□□□ 0.43
HERPUD1-203ENST00000379792 COL23A1Q86Y22 540 aaPredicted RBP17.76■□□□□ 0.43
HERPUD1-203ENST00000379792 C9orf78Q9NZ63 289 aaPredicted RBP17.76■□□□□ 0.43
HERPUD1-203ENST00000379792 QSER1Q2KHR3 1735 aa17.76■□□□□ 0.43
HERPUD1-203ENST00000379792 USP42Q9H9J4 1324 aaKnown RBP17.76■□□□□ 0.43
HERPUD1-203ENST00000379792 HSP90AB3PQ58FF7 597 aa17.76■□□□□ 0.43
HERPUD1-203ENST00000379792 RTL5Q5HYW3 569 aaPredicted RBP17.76■□□□□ 0.43
HERPUD1-203ENST00000379792 BICDL1Q6ZP65 573 aa17.76■□□□□ 0.43
HERPUD1-203ENST00000379792 CWC25Q9NXE8 425 aaPredicted RBP17.76■□□□□ 0.43
HERPUD1-203ENST00000379792 UBR3Q6ZT12 1888 aa17.76■□□□□ 0.43
HERPUD1-203ENST00000379792 ERICH6BQ5W0A0 696 aa17.75■□□□□ 0.43
HERPUD1-203ENST00000379792 NLRP10Q86W26 655 aa17.75■□□□□ 0.43
HERPUD1-203ENST00000379792 ZNF34Q8IZ26 560 aa17.75■□□□□ 0.43
HERPUD1-203ENST00000379792 ZNF652Q9Y2D9 606 aa17.75■□□□□ 0.43
HERPUD1-203ENST00000379792 FAM177BA6PVY3 158 aa17.74■□□□□ 0.43
HERPUD1-203ENST00000379792 GRM8O00222 908 aa17.74■□□□□ 0.43
HERPUD1-203ENST00000379792 TBC1D9BQ66K14 1250 aa17.74■□□□□ 0.43
HERPUD1-203ENST00000379792 CCDC191Q8NCU4 936 aa17.74■□□□□ 0.43
HERPUD1-203ENST00000379792 NIP7Q9Y221 180 aaKnown RBP eCLIP17.74■□□□□ 0.43
HERPUD1-203ENST00000379792 PCDHB15Q9Y5E8 787 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms