RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 TSPYL1Q9H0U9 437 aa9.75□□□□□ -0.85
PTPRR-203ENST00000378778 FAM53CQ9NYF3 392 aa9.75□□□□□ -0.85
PTPRR-203ENST00000378778 KDRP35968 1356 aa9.75□□□□□ -0.85
PTPRR-203ENST00000378778 AGLP35573 1532 aa9.75□□□□□ -0.85
PTPRR-203ENST00000378778 TTC21AQ8NDW8 1320 aa9.74□□□□□ -0.85
PTPRR-203ENST00000378778 FAM83GA6ND36 823 aa9.74□□□□□ -0.85
PTPRR-203ENST00000378778 CTAGE5O15320 804 aa9.74□□□□□ -0.85
PTPRR-203ENST00000378778 RBM6P78332 1123 aaKnown RBP9.74□□□□□ -0.85
PTPRR-203ENST00000378778 TYRO3Q06418 890 aa9.74□□□□□ -0.85
PTPRR-203ENST00000378778 SLC20A2Q08357 652 aa9.74□□□□□ -0.85
PTPRR-203ENST00000378778 RUFY3Q7L099 469 aa9.74□□□□□ -0.85
PTPRR-203ENST00000378778 KRT222Q8N1A0 295 aa9.74□□□□□ -0.85
PTPRR-203ENST00000378778 GDPD2Q9HCC8 539 aa9.74□□□□□ -0.85
PTPRR-203ENST00000378778 ZSWIM6Q9HCJ5 1215 aa9.74□□□□□ -0.85
PTPRR-203ENST00000378778 HYPKQ9NX55 129 aa9.74□□□□□ -0.85
PTPRR-203ENST00000378778 PSMA5P28066 241 aa9.74□□□□□ -0.85
PTPRR-203ENST00000378778 ZNF75DP51815 510 aa9.74□□□□□ -0.85
PTPRR-203ENST00000378778 EIF4A2Q14240 407 aaKnown RBP9.74□□□□□ -0.85
PTPRR-203ENST00000378778 NME9Q86XW9 330 aa9.74□□□□□ -0.85
PTPRR-203ENST00000378778 MRFAP1L1Q96HT8 127 aa9.74□□□□□ -0.85
PTPRR-203ENST00000378778 CHAMP1Q96JM3 812 aa9.74□□□□□ -0.85
PTPRR-203ENST00000378778 UPF3BQ9BZI7 483 aaKnown RBP9.74□□□□□ -0.85
PTPRR-203ENST00000378778 APBB1O00213 710 aa9.73□□□□□ -0.85
PTPRR-203ENST00000378778 GLRX3O76003 335 aaKnown RBP9.73□□□□□ -0.85
PTPRR-203ENST00000378778 GIMAP6Q6P9H5 292 aa9.73□□□□□ -0.85
PTPRR-203ENST00000378778 CLSTN2Q9H4D0 955 aa9.73□□□□□ -0.85
PTPRR-203ENST00000378778 SNRKQ9NRH2 765 aa9.73□□□□□ -0.85
PTPRR-203ENST00000378778 EXOC6BQ9Y2D4 811 aa9.73□□□□□ -0.85
PTPRR-203ENST00000378778 CYP46A1Q9Y6A2 500 aa9.73□□□□□ -0.85
PTPRR-203ENST00000378778 MRVI1Q9Y6F6 885 aa9.73□□□□□ -0.85
PTPRR-203ENST00000378778 NRXN3Q9Y4C0 1643 aa9.73□□□□□ -0.85
PTPRR-203ENST00000378778 FIBPO43427 364 aa9.73□□□□□ -0.85
PTPRR-203ENST00000378778 TNNT1P13805 278 aa9.73□□□□□ -0.85
PTPRR-203ENST00000378778 GJB2P29033 226 aa9.73□□□□□ -0.85
PTPRR-203ENST00000378778 KCNJ6P48051 423 aa9.73□□□□□ -0.85
PTPRR-203ENST00000378778 SULT6B1Q6IMI4 303 aa9.73□□□□□ -0.85
PTPRR-203ENST00000378778 ERO1AQ96HE7 468 aa9.73□□□□□ -0.85
PTPRR-203ENST00000378778 TSPYL4Q9UJ04 414 aa9.73□□□□□ -0.85
PTPRR-203ENST00000378778 U2AF2P26368 475 aaKnown RBP eCLIP9.72□□□□□ -0.85
PTPRR-203ENST00000378778 FLIIQ13045 1269 aa9.72□□□□□ -0.85
PTPRR-203ENST00000378778 KRT24Q2M2I5 525 aa9.72□□□□□ -0.85
PTPRR-203ENST00000378778 NUTM2DQ5VT03 806 aaPredicted RBP9.72□□□□□ -0.85
PTPRR-203ENST00000378778 ZSCAN25Q6NSZ9 544 aa9.72□□□□□ -0.85
PTPRR-203ENST00000378778 ZNF771Q7L3S4 317 aaPredicted RBP9.72□□□□□ -0.85
PTPRR-203ENST00000378778 PI4K2BQ8TCG2 481 aa9.72□□□□□ -0.85
PTPRR-203ENST00000378778 GPATCH3Q96I76 525 aa9.72□□□□□ -0.85
PTPRR-203ENST00000378778 PDRG1Q9NUG6 133 aa9.72□□□□□ -0.85
PTPRR-203ENST00000378778 CALCOCO1Q9P1Z2 691 aa9.72□□□□□ -0.85
PTPRR-203ENST00000378778 PEAK1Q9H792 1746 aa9.72□□□□□ -0.85
PTPRR-203ENST00000378778 CEP170BQ9Y4F5 1589 aaPredicted RBP9.72□□□□□ -0.85
PTPRR-203ENST00000378778 UBTFL1P0CB47 393 aaPredicted RBP9.72□□□□□ -0.85
PTPRR-203ENST00000378778 ZKSCAN1P17029 563 aaPredicted RBP9.72□□□□□ -0.85
PTPRR-203ENST00000378778 DCTN1Q14203 1278 aa9.72□□□□□ -0.85
PTPRR-203ENST00000378778 ATL3Q6DD88 541 aa9.72□□□□□ -0.85
PTPRR-203ENST00000378778 KIF18AQ8NI77 898 aa9.72□□□□□ -0.85
PTPRR-203ENST00000378778 NUDT16Q96DE0 195 aaKnown RBP9.72□□□□□ -0.85
PTPRR-203ENST00000378778 TNMDQ9H2S6 317 aa9.72□□□□□ -0.85
PTPRR-203ENST00000378778 AP5Z1O43299 807 aa9.71□□□□□ -0.85
PTPRR-203ENST00000378778 HOXB7P09629 217 aa9.71□□□□□ -0.85
PTPRR-203ENST00000378778 SLFN14P0C7P3 912 aa9.71□□□□□ -0.86
PTPRR-203ENST00000378778 PTGS1P23219 599 aa9.71□□□□□ -0.86
PTPRR-203ENST00000378778 GSDMDP57764 484 aa9.71□□□□□ -0.86
PTPRR-203ENST00000378778 FGD1P98174 961 aa9.71□□□□□ -0.86
PTPRR-203ENST00000378778 DNM1Q05193 864 aaKnown RBP9.71□□□□□ -0.86
PTPRR-203ENST00000378778 CEP135Q66GS9 1140 aa9.71□□□□□ -0.86
PTPRR-203ENST00000378778 SLC4A10Q6U841 1118 aa9.71□□□□□ -0.86
PTPRR-203ENST00000378778 CCDC186Q7Z3E2 898 aa9.71□□□□□ -0.86
PTPRR-203ENST00000378778 ERC1Q8IUD2 1116 aa9.71□□□□□ -0.86
PTPRR-203ENST00000378778 CHMP4CQ96CF2 233 aa9.71□□□□□ -0.86
PTPRR-203ENST00000378778 CBX8Q9HC52 389 aa9.71□□□□□ -0.86
PTPRR-203ENST00000378778 USP54Q70EL1 1684 aa9.71□□□□□ -0.86
PTPRR-203ENST00000378778 GOLGA6L4A6NEF3 574 aa9.7□□□□□ -0.86
PTPRR-203ENST00000378778 HDGFP51858 240 aaKnown RBP9.7□□□□□ -0.86
PTPRR-203ENST00000378778 TERF2Q15554 542 aa9.7□□□□□ -0.86
PTPRR-203ENST00000378778 C17orf53Q8N3J3 647 aaPredicted RBP9.7□□□□□ -0.86
PTPRR-203ENST00000378778 RHPN1Q8TCX5 695 aa9.7□□□□□ -0.86
PTPRR-203ENST00000378778 PTPRUQ92729 1446 aa9.7□□□□□ -0.86
PTPRR-203ENST00000378778 TSPOAP1O95153 1857 aa9.7□□□□□ -0.86
PTPRR-203ENST00000378778 PNMA6EA0A0J9YXQ4 647 aa9.7□□□□□ -0.86
PTPRR-203ENST00000378778 PLEKHG3A1L390 1219 aa9.7□□□□□ -0.86
PTPRR-203ENST00000378778 TPD52L1Q16890 204 aaPredicted RBP9.7□□□□□ -0.86
PTPRR-203ENST00000378778 TSC1Q92574 1164 aa9.7□□□□□ -0.86
PTPRR-203ENST00000378778 TRIM5Q9C035 493 aa9.7□□□□□ -0.86
PTPRR-203ENST00000378778 ZSCAN16Q9H4T2 348 aaPredicted RBP9.7□□□□□ -0.86
PTPRR-203ENST00000378778 HMG20BQ9P0W2 317 aa9.7□□□□□ -0.86
PTPRR-203ENST00000378778 IMPACTQ9P2X3 320 aa9.7□□□□□ -0.86
PTPRR-203ENST00000378778 RIMS1Q86UR5 1692 aaKnown RBP9.7□□□□□ -0.86
PTPRR-203ENST00000378778 SBNO1A3KN83 1393 aa9.7□□□□□ -0.86
PTPRR-203ENST00000378778 MYH15Q9Y2K3 1946 aa9.7□□□□□ -0.86
PTPRR-203ENST00000378778 CCP110O43303 1012 aa9.69□□□□□ -0.86
PTPRR-203ENST00000378778 ATP8B1O43520 1251 aa9.69□□□□□ -0.86
PTPRR-203ENST00000378778 CASTP20810 708 aaKnown RBP9.69□□□□□ -0.86
PTPRR-203ENST00000378778 MTX1Q13505 466 aa9.69□□□□□ -0.86
PTPRR-203ENST00000378778 TSGA10IPQ3SY00 556 aa9.69□□□□□ -0.86
PTPRR-203ENST00000378778 LARP1BQ659C4 914 aaKnown RBP9.69□□□□□ -0.86
PTPRR-203ENST00000378778 NYAP1Q6ZVC0 841 aa9.69□□□□□ -0.86
PTPRR-203ENST00000378778 NOL8Q76FK4 1167 aaKnown RBP9.69□□□□□ -0.86
PTPRR-203ENST00000378778 MCM10Q7L590 875 aa9.69□□□□□ -0.86
PTPRR-203ENST00000378778 DRC7Q8IY82 874 aa9.69□□□□□ -0.86
PTPRR-203ENST00000378778 SPDYE4A6NLX3 237 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms