RNA–Protein interactions for RNA: ENST00000378512.5

RER1-202, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 1 (best) BASIC

Gene RER1, Length 1,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-202ENST00000378512 C2CD5Q86YS7 1000 aa22.28■■□□□ 1.16
RER1-202ENST00000378512 PRELPP51888 382 aa22.27■■□□□ 1.16
RER1-202ENST00000378512 RNF181Q9P0P0 153 aa22.27■■□□□ 1.16
RER1-202ENST00000378512 COL11A2P13942 1736 aaPredicted RBP22.27■■□□□ 1.16
RER1-202ENST00000378512 PRR5LQ6MZQ0 368 aa22.26■■□□□ 1.15
RER1-202ENST00000378512 DZIP3Q86Y13 1208 aaKnown RBP22.26■■□□□ 1.15
RER1-202ENST00000378512 MRS2Q9HD23 443 aa22.26■■□□□ 1.15
RER1-202ENST00000378512 ERBB4Q15303 1308 aa22.26■■□□□ 1.15
RER1-202ENST00000378512 SBF1O95248 1867 aa22.26■■□□□ 1.15
RER1-202ENST00000378512 NUP98P52948 1817 aa22.25■■□□□ 1.15
RER1-202ENST00000378512 ZNF853P0CG23 659 aa22.25■■□□□ 1.15
RER1-202ENST00000378512 CFAP44Q96MT7 982 aa22.25■■□□□ 1.15
RER1-202ENST00000378512 NCBP3Q53F19 620 aaKnown RBP22.24■■□□□ 1.15
RER1-202ENST00000378512 CLEC4GQ6UXB4 293 aa22.24■■□□□ 1.15
RER1-202ENST00000378512 HSPA6P17066 643 aa22.23■■□□□ 1.15
RER1-202ENST00000378512 LRP10Q7Z4F1 713 aa22.23■■□□□ 1.15
RER1-202ENST00000378512 NPM2Q86SE8 214 aaKnown RBP22.23■■□□□ 1.15
RER1-202ENST00000378512 TTLL6Q8N841 843 aa22.23■■□□□ 1.15
RER1-202ENST00000378512 H0YIN7 160 aa22.22■■□□□ 1.15
RER1-202ENST00000378512 CCDC27Q2M243 656 aa22.22■■□□□ 1.15
RER1-202ENST00000378512 PDIA6Q15084 440 aa22.21■■□□□ 1.15
RER1-202ENST00000378512 ZNF219Q9P2Y4 722 aaPredicted RBP22.21■■□□□ 1.15
RER1-202ENST00000378512 NFKBIEO00221 500 aa22.2■■□□□ 1.14
RER1-202ENST00000378512 ZNF622Q969S3 477 aaKnown RBP eCLIP22.2■■□□□ 1.14
RER1-202ENST00000378512 SETDB2Q96T68 719 aa22.2■■□□□ 1.14
RER1-202ENST00000378512 BRIP1Q9BX63 1249 aa22.2■■□□□ 1.14
RER1-202ENST00000378512 HOXB7P09629 217 aa22.19■■□□□ 1.14
RER1-202ENST00000378512 IFT57Q9NWB7 429 aa22.19■■□□□ 1.14
RER1-202ENST00000378512 ERVV-1B6SEH8 477 aa22.18■■□□□ 1.14
RER1-202ENST00000378512 CALD1Q05682 793 aaKnown RBP22.18■■□□□ 1.14
RER1-202ENST00000378512 CNBD1Q8NA66 436 aa22.18■■□□□ 1.14
RER1-202ENST00000378512 MBIPQ9NS73 344 aa22.18■■□□□ 1.14
RER1-202ENST00000378512 TOMM70O94826 608 aa22.17■■□□□ 1.14
RER1-202ENST00000378512 KRT24Q2M2I5 525 aa22.17■■□□□ 1.14
RER1-202ENST00000378512 ZNF652Q9Y2D9 606 aa22.17■■□□□ 1.14
RER1-202ENST00000378512 PDE6BP35913 854 aa22.16■■□□□ 1.14
RER1-202ENST00000378512 GNAI1P63096 354 aa22.16■■□□□ 1.14
RER1-202ENST00000378512 RRAGCQ9HB90 399 aa22.16■■□□□ 1.14
RER1-202ENST00000378512 C21orf2O43822 256 aa22.15■■□□□ 1.14
RER1-202ENST00000378512 HLFQ16534 295 aa22.15■■□□□ 1.14
RER1-202ENST00000378512 LAS1LQ9Y4W2 734 aaKnown RBP22.15■■□□□ 1.14
RER1-202ENST00000378512 MAP3K15Q6ZN16 1313 aa22.15■■□□□ 1.14
RER1-202ENST00000378512 CACNA1SQ13698 1873 aa22.15■■□□□ 1.14
RER1-202ENST00000378512 TIAM2Q8IVF5 1701 aa22.15■■□□□ 1.14
RER1-202ENST00000378512 CCDC88AQ3V6T2 1871 aa22.15■■□□□ 1.14
RER1-202ENST00000378512 LMNB1P20700 586 aa22.14■■□□□ 1.14
RER1-202ENST00000378512 TTLL7Q6ZT98 887 aa22.14■■□□□ 1.14
RER1-202ENST00000378512 ANKRD36CQ5JPF3 1778 aa22.14■■□□□ 1.13
RER1-202ENST00000378512 SLX4Q8IY92 1834 aa22.14■■□□□ 1.13
RER1-202ENST00000378512 FAM177BA6PVY3 158 aa22.14■■□□□ 1.13
RER1-202ENST00000378512 NPHP1O15259 732 aa22.14■■□□□ 1.13
RER1-202ENST00000378512 MYL6BP14649 208 aa22.14■■□□□ 1.13
RER1-202ENST00000378512 EIF2S2P20042 333 aaKnown RBP22.14■■□□□ 1.13
RER1-202ENST00000378512 WWC1Q8IX03 1113 aa22.14■■□□□ 1.13
RER1-202ENST00000378512 NGEFQ8N5V2 710 aa22.14■■□□□ 1.13
RER1-202ENST00000378512 KDM2BQ8NHM5 1336 aa22.13■■□□□ 1.13
RER1-202ENST00000378512 ST5P78524 1137 aa22.13■■□□□ 1.13
RER1-202ENST00000378512 PROSER3Q2NL68 480 aa22.13■■□□□ 1.13
RER1-202ENST00000378512 NBPF5PQ86XG9 351 aaPredicted RBP22.13■■□□□ 1.13
RER1-202ENST00000378512 ARFGEF2Q9Y6D5 1785 aa22.12■■□□□ 1.13
RER1-202ENST00000378512 SRGNP10124 158 aa22.12■■□□□ 1.13
RER1-202ENST00000378512 DDX21Q9NR30 783 aaKnown RBP eCLIP22.12■■□□□ 1.13
RER1-202ENST00000378512 NIP7Q9Y221 180 aaKnown RBP eCLIP22.12■■□□□ 1.13
RER1-202ENST00000378512 TNRC6CQ9HCJ0 1690 aaKnown RBP22.11■■□□□ 1.13
RER1-202ENST00000378512 FER1L6Q2WGJ9 1857 aa22.11■■□□□ 1.13
RER1-202ENST00000378512 PDZRN3Q9UPQ7 1066 aa22.11■■□□□ 1.13
RER1-202ENST00000378512 IL16Q14005 1332 aa22.1■■□□□ 1.13
RER1-202ENST00000378512 DUSP27Q5VZP5 1158 aa22.1■■□□□ 1.13
RER1-202ENST00000378512 PRPF40BQ6NWY9 871 aaKnown RBP22.1■■□□□ 1.13
RER1-202ENST00000378512 GIGYF2Q6Y7W6 1299 aaKnown RBP22.1■■□□□ 1.13
RER1-202ENST00000378512 KIF6Q6ZMV9 814 aa22.1■■□□□ 1.13
RER1-202ENST00000378512 HTRA3P83110 453 aa22.09■■□□□ 1.13
RER1-202ENST00000378512 STYK1Q6J9G0 422 aa22.09■■□□□ 1.13
RER1-202ENST00000378512 RBM46Q8TBY0 533 aaKnown RBP22.09■■□□□ 1.13
RER1-202ENST00000378512 IBTKQ9P2D0 1353 aaPredicted RBP22.09■■□□□ 1.13
RER1-202ENST00000378512 ANXA1P04083 346 aa22.08■■□□□ 1.13
RER1-202ENST00000378512 HDGFL1Q5TGJ6 251 aa22.08■■□□□ 1.13
RER1-202ENST00000378512 C16orf71Q8IYS4 520 aaPredicted RBP22.08■■□□□ 1.13
RER1-202ENST00000378512 ZNF34Q8IZ26 560 aa22.08■■□□□ 1.13
RER1-202ENST00000378512 KLRG2A4D1S0 409 aaPredicted RBP22.07■■□□□ 1.12
RER1-202ENST00000378512 OLFM4Q6UX06 510 aa22.07■■□□□ 1.12
RER1-202ENST00000378512 MASTLQ96GX5 879 aa22.07■■□□□ 1.12
RER1-202ENST00000378512 CHPF2Q9P2E5 772 aa22.07■■□□□ 1.12
RER1-202ENST00000378512 UBN2Q6ZU65 1347 aa22.07■■□□□ 1.12
RER1-202ENST00000378512 GLTPD2A6NH11 291 aa22.06■■□□□ 1.12
RER1-202ENST00000378512 TPTE2Q6XPS3 522 aa22.06■■□□□ 1.12
RER1-202ENST00000378512 NECTIN2Q92692 538 aa22.06■■□□□ 1.12
RER1-202ENST00000378512 CNKSR1Q969H4 720 aa22.06■■□□□ 1.12
RER1-202ENST00000378512 ZBTB3Q9H5J0 574 aa22.06■■□□□ 1.12
RER1-202ENST00000378512 DBF4Q9UBU7 674 aaPredicted RBP22.06■■□□□ 1.12
RER1-202ENST00000378512 ZC3H4Q9UPT8 1303 aaKnown RBP22.06■■□□□ 1.12
RER1-202ENST00000378512 APLP1P51693 650 aa22.06■■□□□ 1.12
RER1-202ENST00000378512 RIC1Q4ADV7 1423 aa22.06■■□□□ 1.12
RER1-202ENST00000378512 COPS6Q7L5N1 327 aa22.06■■□□□ 1.12
RER1-202ENST00000378512 FAM9BQ8IZU0 186 aa22.06■■□□□ 1.12
RER1-202ENST00000378512 C8orf58Q8NAV2 365 aa22.06■■□□□ 1.12
RER1-202ENST00000378512 ABCC12Q96J65 1359 aa22.05■■□□□ 1.12
RER1-202ENST00000378512 WDR63Q8IWG1 891 aa22.05■■□□□ 1.12
RER1-202ENST00000378512 C7orf43Q8WVR3 580 aa22.05■■□□□ 1.12
RER1-202ENST00000378512 POTECB2RU33 542 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 130.1 ms