RNA–Protein interactions for RNA: ENST00000377656.6

CNTNAP3-204, Transcript of contactin associated protein like 3, humanhuman

TSL 1 (best) BASIC

Gene CNTNAP3, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3-204ENST00000377656 LDHCP07864 332 aa20.67■□□□□ 0.9
CNTNAP3-204ENST00000377656 TAF4BQ92750 862 aa20.67■□□□□ 0.9
CNTNAP3-204ENST00000377656 C6orf229H3BNL8 230 aa20.66■□□□□ 0.9
CNTNAP3-204ENST00000377656 MATR3P43243 847 aaKnown RBP eCLIP20.66■□□□□ 0.9
CNTNAP3-204ENST00000377656 TNPO1Q92973 898 aaKnown RBP20.66■□□□□ 0.9
CNTNAP3-204ENST00000377656 TTC22Q5TAA0 569 aa20.66■□□□□ 0.9
CNTNAP3-204ENST00000377656 KIF2AO00139 706 aaPredicted RBP20.66■□□□□ 0.9
CNTNAP3-204ENST00000377656 NLRP5P59047 1200 aa20.65■□□□□ 0.9
CNTNAP3-204ENST00000377656 RHPN1Q8TCX5 695 aa20.65■□□□□ 0.9
CNTNAP3-204ENST00000377656 RAPGEF6Q8TEU7 1601 aa20.65■□□□□ 0.9
CNTNAP3-204ENST00000377656 IGHDP01880 384 aa20.65■□□□□ 0.9
CNTNAP3-204ENST00000377656 PRAG1Q86YV5 1406 aa20.65■□□□□ 0.9
CNTNAP3-204ENST00000377656 UBXN4Q92575 508 aa20.65■□□□□ 0.9
CNTNAP3-204ENST00000377656 LARP6Q9BRS8 491 aaKnown RBP20.65■□□□□ 0.9
CNTNAP3-204ENST00000377656 USP16Q9Y5T5 823 aa20.65■□□□□ 0.9
CNTNAP3-204ENST00000377656 IARSP41252 1262 aaKnown RBP20.65■□□□□ 0.9
CNTNAP3-204ENST00000377656 TMEM266Q2M3C6 531 aa20.65■□□□□ 0.9
CNTNAP3-204ENST00000377656 FKBP15Q5T1M5 1219 aa20.65■□□□□ 0.9
CNTNAP3-204ENST00000377656 DDX19AQ9NUU7 478 aaKnown RBP20.65■□□□□ 0.9
CNTNAP3-204ENST00000377656 HMG20BQ9P0W2 317 aa20.65■□□□□ 0.9
CNTNAP3-204ENST00000377656 UQCRHLA0A096LP55 91 aa20.64■□□□□ 0.9
CNTNAP3-204ENST00000377656 UQCRHP07919 91 aa20.64■□□□□ 0.9
CNTNAP3-204ENST00000377656 SEPT7Q16181 437 aaKnown RBP20.64■□□□□ 0.9
CNTNAP3-204ENST00000377656 NEK1Q96PY6 1258 aa20.64■□□□□ 0.89
CNTNAP3-204ENST00000377656 DMRT2Q9Y5R5 561 aa20.64■□□□□ 0.89
CNTNAP3-204ENST00000377656 HDAC1Q13547 482 aaPredicted RBP20.64■□□□□ 0.89
CNTNAP3-204ENST00000377656 DDX46Q7L014 1031 aaKnown RBP20.64■□□□□ 0.89
CNTNAP3-204ENST00000377656 STX6O43752 255 aa20.64■□□□□ 0.89
CNTNAP3-204ENST00000377656 CNNM3Q8NE01 707 aa20.64■□□□□ 0.89
CNTNAP3-204ENST00000377656 NUP153P49790 1475 aaKnown RBP20.63■□□□□ 0.89
CNTNAP3-204ENST00000377656 DESP17661 470 aa20.63■□□□□ 0.89
CNTNAP3-204ENST00000377656 TSHZ3Q63HK5 1081 aa20.63■□□□□ 0.89
CNTNAP3-204ENST00000377656 CTTNBP2Q8WZ74 1663 aa20.63■□□□□ 0.89
CNTNAP3-204ENST00000377656 ZSCAN12O43309 604 aa20.63■□□□□ 0.89
CNTNAP3-204ENST00000377656 FSIP1Q8NA03 581 aa20.63■□□□□ 0.89
CNTNAP3-204ENST00000377656 TSG101Q99816 390 aa20.63■□□□□ 0.89
CNTNAP3-204ENST00000377656 GJB2P29033 226 aa20.63■□□□□ 0.89
CNTNAP3-204ENST00000377656 SPA17Q15506 151 aa20.63■□□□□ 0.89
CNTNAP3-204ENST00000377656 TMEM67Q5HYA8 995 aa20.63■□□□□ 0.89
CNTNAP3-204ENST00000377656 MEIS3Q99687 375 aa20.63■□□□□ 0.89
CNTNAP3-204ENST00000377656 TFIP11Q9UBB9 837 aaKnown RBP20.63■□□□□ 0.89
CNTNAP3-204ENST00000377656 CKAP2LQ8IYA6 745 aa20.63■□□□□ 0.89
CNTNAP3-204ENST00000377656 CENPHQ9H3R5 247 aa20.63■□□□□ 0.89
CNTNAP3-204ENST00000377656 TBC1D32Q96NH3 1257 aa20.62■□□□□ 0.89
CNTNAP3-204ENST00000377656 BAG3O95817 575 aa20.62■□□□□ 0.89
CNTNAP3-204ENST00000377656 TOP1P11387 765 aaKnown RBP20.62■□□□□ 0.89
CNTNAP3-204ENST00000377656 ORC3Q9UBD5 711 aaPredicted RBP20.62■□□□□ 0.89
CNTNAP3-204ENST00000377656 ITSN2Q9NZM3 1697 aa20.62■□□□□ 0.89
CNTNAP3-204ENST00000377656 HAND2P61296 217 aa20.62■□□□□ 0.89
CNTNAP3-204ENST00000377656 PTPN14Q15678 1187 aa20.62■□□□□ 0.89
CNTNAP3-204ENST00000377656 CUL5Q93034 780 aa20.62■□□□□ 0.89
CNTNAP3-204ENST00000377656 KIF5BP33176 963 aa20.62■□□□□ 0.89
CNTNAP3-204ENST00000377656 POTEJP0CG39 1038 aa20.61■□□□□ 0.89
CNTNAP3-204ENST00000377656 NCOA7Q8NI08 942 aa20.61■□□□□ 0.89
CNTNAP3-204ENST00000377656 ASXL1Q8IXJ9 1541 aa20.61■□□□□ 0.89
CNTNAP3-204ENST00000377656 KIF20AO95235 890 aa20.61■□□□□ 0.89
CNTNAP3-204ENST00000377656 UQCRFS1P1P0C7P4 283 aa20.61■□□□□ 0.89
CNTNAP3-204ENST00000377656 ANKRD18AQ8IVF6 992 aa20.61■□□□□ 0.89
CNTNAP3-204ENST00000377656 CCDC148Q8NFR7 591 aa20.61■□□□□ 0.89
CNTNAP3-204ENST00000377656 CHPF2Q9P2E5 772 aa20.61■□□□□ 0.89
CNTNAP3-204ENST00000377656 FGFR1OPO95684 399 aaKnown RBP20.61■□□□□ 0.89
CNTNAP3-204ENST00000377656 PDE4BQ07343 736 aa20.61■□□□□ 0.89
CNTNAP3-204ENST00000377656 CACNA2D4Q7Z3S7 1137 aa20.61■□□□□ 0.89
CNTNAP3-204ENST00000377656 MFSD6Q6ZSS7 791 aa20.61■□□□□ 0.89
CNTNAP3-204ENST00000377656 MICU3Q86XE3 530 aa20.61■□□□□ 0.89
CNTNAP3-204ENST00000377656 JARID2Q92833 1246 aaPredicted RBP20.61■□□□□ 0.89
CNTNAP3-204ENST00000377656 CCDC12Q8WUD4 166 aaPredicted RBP20.6■□□□□ 0.89
CNTNAP3-204ENST00000377656 GDPD2Q9HCC8 539 aa20.6■□□□□ 0.89
CNTNAP3-204ENST00000377656 TSPY2A6NKD2 308 aa20.6■□□□□ 0.89
CNTNAP3-204ENST00000377656 NUCB1Q02818 461 aa20.6■□□□□ 0.89
CNTNAP3-204ENST00000377656 JAKMIP3Q5VZ66 844 aa20.6■□□□□ 0.89
CNTNAP3-204ENST00000377656 PLCH2O75038 1416 aa20.6■□□□□ 0.89
CNTNAP3-204ENST00000377656 ZRSR2Q15696 482 aaKnown RBP20.59■□□□□ 0.89
CNTNAP3-204ENST00000377656 SPTY2D1Q68D10 685 aaPredicted RBP20.59■□□□□ 0.89
CNTNAP3-204ENST00000377656 XAGE3Q8WTP9 111 aa20.59■□□□□ 0.89
CNTNAP3-204ENST00000377656 UBA5Q9GZZ9 404 aa20.59■□□□□ 0.89
CNTNAP3-204ENST00000377656 CETN2P41208 172 aa20.59■□□□□ 0.89
CNTNAP3-204ENST00000377656 COPS6Q7L5N1 327 aa20.59■□□□□ 0.89
CNTNAP3-204ENST00000377656 ZCRB1Q8TBF4 217 aaKnown RBP20.59■□□□□ 0.89
CNTNAP3-204ENST00000377656 UHRF1BP1LA0JNW5 1464 aa20.59■□□□□ 0.89
CNTNAP3-204ENST00000377656 VPS36Q86VN1 386 aa20.59■□□□□ 0.89
CNTNAP3-204ENST00000377656 ALDH1L1O75891 902 aa20.58■□□□□ 0.89
CNTNAP3-204ENST00000377656 SSR1P43307 286 aaKnown RBP20.58■□□□□ 0.89
CNTNAP3-204ENST00000377656 ANKRD44Q8N8A2 993 aa20.58■□□□□ 0.89
CNTNAP3-204ENST00000377656 NPHP3Q7Z494 1330 aa20.58■□□□□ 0.89
CNTNAP3-204ENST00000377656 METAP2P50579 478 aaKnown RBP eCLIP20.58■□□□□ 0.88
CNTNAP3-204ENST00000377656 TAX1BP1Q86VP1 789 aa20.58■□□□□ 0.88
CNTNAP3-204ENST00000377656 TCP11L1Q9NUJ3 509 aa20.58■□□□□ 0.88
CNTNAP3-204ENST00000377656 SDSP20132 328 aa20.58■□□□□ 0.88
CNTNAP3-204ENST00000377656 CLIP2Q9UDT6 1046 aa20.58■□□□□ 0.88
CNTNAP3-204ENST00000377656 ARHGEF12Q9NZN5 1544 aa20.57■□□□□ 0.88
CNTNAP3-204ENST00000377656 ANKRD62A6NC57 917 aa20.57■□□□□ 0.88
CNTNAP3-204ENST00000377656 ZFYP08048 801 aaPredicted RBP20.57■□□□□ 0.88
CNTNAP3-204ENST00000377656 CCDC152Q4G0S7 254 aa20.57■□□□□ 0.88
CNTNAP3-204ENST00000377656 KIF18AQ8NI77 898 aa20.57■□□□□ 0.88
CNTNAP3-204ENST00000377656 ZNF219Q9P2Y4 722 aaPredicted RBP20.57■□□□□ 0.88
CNTNAP3-204ENST00000377656 USP25Q9UHP3 1055 aa20.57■□□□□ 0.88
CNTNAP3-204ENST00000377656 PCDHB15Q9Y5E8 787 aa20.57■□□□□ 0.88
CNTNAP3-204ENST00000377656 KIF5CO60282 957 aa20.57■□□□□ 0.88
CNTNAP3-204ENST00000377656 FAM193AP78312 1265 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms