RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 H0YIN7 160 aa28.7■■■□□ 2.18
SRM-201ENST00000376957 CCDC27Q2M243 656 aa28.7■■■□□ 2.18
SRM-201ENST00000376957 NCBP3Q53F19 620 aaKnown RBP28.7■■■□□ 2.18
SRM-201ENST00000376957 DALRD3Q5D0E6 543 aaKnown RBP28.7■■■□□ 2.18
SRM-201ENST00000376957 NBPF5PQ86XG9 351 aaPredicted RBP28.7■■■□□ 2.18
SRM-201ENST00000376957 NIP7Q9Y221 180 aaKnown RBP eCLIP28.7■■■□□ 2.18
SRM-201ENST00000376957 TPTE2Q6XPS3 522 aa28.69■■■□□ 2.18
SRM-201ENST00000376957 BRIP1Q9BX63 1249 aa28.69■■■□□ 2.18
SRM-201ENST00000376957 MAP3K15Q6ZN16 1313 aa28.69■■■□□ 2.18
SRM-201ENST00000376957 MBIPQ9NS73 344 aa28.68■■■□□ 2.18
SRM-201ENST00000376957 GTF2E1P29083 439 aaPredicted RBP28.67■■■□□ 2.18
SRM-201ENST00000376957 HDGFL1Q5TGJ6 251 aa28.67■■■□□ 2.18
SRM-201ENST00000376957 CHRNA5P30532 468 aa28.66■■■□□ 2.18
SRM-201ENST00000376957 PRR5LQ6MZQ0 368 aa28.66■■■□□ 2.18
SRM-201ENST00000376957 C2CD5Q86YS7 1000 aa28.66■■■□□ 2.18
SRM-201ENST00000376957 FAM9BQ8IZU0 186 aa28.66■■■□□ 2.18
SRM-201ENST00000376957 KIAA1551Q9HCM1 1747 aa28.66■■■□□ 2.18
SRM-201ENST00000376957 ZNF853P0CG23 659 aa28.65■■■□□ 2.18
SRM-201ENST00000376957 KCNA3P22001 575 aa28.65■■■□□ 2.18
SRM-201ENST00000376957 NECTIN2Q92692 538 aa28.65■■■□□ 2.18
SRM-201ENST00000376957 DDX21Q9NR30 783 aaKnown RBP eCLIP28.65■■■□□ 2.18
SRM-201ENST00000376957 DUSP27Q5VZP5 1158 aa28.64■■■□□ 2.18
SRM-201ENST00000376957 NYXQ9GZU5 481 aa28.64■■■□□ 2.18
SRM-201ENST00000376957 DBF4Q9UBU7 674 aaPredicted RBP28.64■■■□□ 2.18
SRM-201ENST00000376957 HLFQ16534 295 aa28.63■■■□□ 2.17
SRM-201ENST00000376957 ZBTB3Q9H5J0 574 aa28.63■■■□□ 2.17
SRM-201ENST00000376957 TTLL7Q6ZT98 887 aa28.62■■■□□ 2.17
SRM-201ENST00000376957 ARHGAP27Q6ZUM4 889 aa28.62■■■□□ 2.17
SRM-201ENST00000376957 WWC1Q8IX03 1113 aa28.62■■■□□ 2.17
SRM-201ENST00000376957 PDIA6Q15084 440 aa28.61■■■□□ 2.17
SRM-201ENST00000376957 GIGYF2Q6Y7W6 1299 aaKnown RBP28.61■■■□□ 2.17
SRM-201ENST00000376957 TTLL6Q8N841 843 aa28.61■■■□□ 2.17
SRM-201ENST00000376957 BRCA1P38398 1863 aaKnown RBP28.6■■■□□ 2.17
SRM-201ENST00000376957 KRT24Q2M2I5 525 aa28.6■■■□□ 2.17
SRM-201ENST00000376957 HSP90AB3PQ58FF7 597 aa28.6■■■□□ 2.17
SRM-201ENST00000376957 AIMP1Q12904 312 aaKnown RBP28.59■■■□□ 2.17
SRM-201ENST00000376957 ZNF622Q969S3 477 aaKnown RBP eCLIP28.59■■■□□ 2.17
SRM-201ENST00000376957 HYPKQ9NX55 129 aa28.59■■■□□ 2.17
SRM-201ENST00000376957 FAM177BA6PVY3 158 aa28.58■■■□□ 2.17
SRM-201ENST00000376957 COPS6Q7L5N1 327 aa28.58■■■□□ 2.17
SRM-201ENST00000376957 CHPF2Q9P2E5 772 aa28.58■■■□□ 2.17
SRM-201ENST00000376957 IL16Q14005 1332 aa28.58■■■□□ 2.17
SRM-201ENST00000376957 ATP10DQ9P241 1426 aa28.58■■■□□ 2.17
SRM-201ENST00000376957 NUP98P52948 1817 aa28.57■■■□□ 2.16
SRM-201ENST00000376957 PARP10Q53GL7 1025 aa28.57■■■□□ 2.16
SRM-201ENST00000376957 PPP1R42Q7Z4L9 355 aa28.57■■■□□ 2.16
SRM-201ENST00000376957 ZNF784Q8NCA9 323 aaPredicted RBP28.57■■■□□ 2.16
SRM-201ENST00000376957 XAGE3Q8WTP9 111 aa28.57■■■□□ 2.16
SRM-201ENST00000376957 GOLGB1Q14789 3259 aaKnown RBP28.57■■■□□ 2.16
SRM-201ENST00000376957 ARFGEF1Q9Y6D6 1849 aa28.57■■■□□ 2.16
SRM-201ENST00000376957 UTRNP46939 3433 aa28.56■■■□□ 2.16
SRM-201ENST00000376957 WDR63Q8IWG1 891 aa28.56■■■□□ 2.16
SRM-201ENST00000376957 CCDC24Q8N4L8 307 aa28.56■■■□□ 2.16
SRM-201ENST00000376957 CNKSR1Q969H4 720 aa28.56■■■□□ 2.16
SRM-201ENST00000376957 ANXA1P04083 346 aa28.55■■■□□ 2.16
SRM-201ENST00000376957 PROSER3Q2NL68 480 aa28.55■■■□□ 2.16
SRM-201ENST00000376957 ELL2O00472 640 aaPredicted RBP28.54■■■□□ 2.16
SRM-201ENST00000376957 GPTP24298 496 aa28.54■■■□□ 2.16
SRM-201ENST00000376957 CCDC30Q5VVM6 783 aa28.54■■■□□ 2.16
SRM-201ENST00000376957 STYK1Q6J9G0 422 aa28.54■■■□□ 2.16
SRM-201ENST00000376957 LRP10Q7Z4F1 713 aa28.54■■■□□ 2.16
SRM-201ENST00000376957 MASTLQ96GX5 879 aa28.54■■■□□ 2.16
SRM-201ENST00000376957 SALL2Q9Y467 1007 aaPredicted RBP28.54■■■□□ 2.16
SRM-201ENST00000376957 DLEC1Q9Y238 1755 aa28.54■■■□□ 2.16
SRM-201ENST00000376957 IBTKQ9P2D0 1353 aaPredicted RBP28.52■■■□□ 2.16
SRM-201ENST00000376957 SENP3-EIF4A1A0A087X0R7 540 aa28.52■■■□□ 2.16
SRM-201ENST00000376957 SRGNP10124 158 aa28.52■■■□□ 2.16
SRM-201ENST00000376957 ZNF34Q8IZ26 560 aa28.52■■■□□ 2.16
SRM-201ENST00000376957 ANKRD13DQ6ZTN6 518 aa28.51■■■□□ 2.15
SRM-201ENST00000376957 ANKRD31Q8N7Z5 1873 aa28.51■■■□□ 2.15
SRM-201ENST00000376957 NPR1P16066 1061 aa28.5■■■□□ 2.15
SRM-201ENST00000376957 PLBD2Q8NHP8 589 aa28.5■■■□□ 2.15
SRM-201ENST00000376957 SOGA3Q5TF21 947 aa28.49■■■□□ 2.15
SRM-201ENST00000376957 C8orf58Q8NAV2 365 aa28.49■■■□□ 2.15
SRM-201ENST00000376957 TSR2Q969E8 191 aaKnown RBP28.49■■■□□ 2.15
SRM-201ENST00000376957 STK31Q9BXU1 1019 aa28.49■■■□□ 2.15
SRM-201ENST00000376957 RNF123Q5XPI4 1314 aa28.48■■■□□ 2.15
SRM-201ENST00000376957 ALDH1B1P30837 517 aa28.48■■■□□ 2.15
SRM-201ENST00000376957 GOLGA2Q08379 1002 aa28.48■■■□□ 2.15
SRM-201ENST00000376957 TCIRG1Q13488 830 aa28.48■■■□□ 2.15
SRM-201ENST00000376957 UTP14AQ9BVJ6 771 aaKnown RBP28.48■■■□□ 2.15
SRM-201ENST00000376957 CCER2I3L3R5 266 aa28.47■■■□□ 2.15
SRM-201ENST00000376957 DDX58O95786 925 aaKnown RBP28.47■■■□□ 2.15
SRM-201ENST00000376957 SUSD4Q5VX71 490 aa28.47■■■□□ 2.15
SRM-201ENST00000376957 MYH16Q9H6N6 1097 aa28.47■■■□□ 2.15
SRM-201ENST00000376957 KLRG2A4D1S0 409 aaPredicted RBP28.46■■■□□ 2.15
SRM-201ENST00000376957 NUTM1Q86Y26 1132 aa28.46■■■□□ 2.15
SRM-201ENST00000376957 UBN2Q6ZU65 1347 aa28.45■■■□□ 2.15
SRM-201ENST00000376957 TWISTNBQ3B726 338 aaPredicted RBP28.45■■■□□ 2.14
SRM-201ENST00000376957 ERFEQ4G0M1 354 aa28.45■■■□□ 2.14
SRM-201ENST00000376957 RIC3Q7Z5B4 369 aa28.45■■■□□ 2.14
SRM-201ENST00000376957 RPGRQ92834 1020 aaKnown RBP28.44■■■□□ 2.14
SRM-201ENST00000376957 PRPF40BQ6NWY9 871 aaKnown RBP28.43■■■□□ 2.14
SRM-201ENST00000376957 NLRP3Q96P20 1036 aa28.43■■■□□ 2.14
SRM-201ENST00000376957 GPBP1L1Q9HC44 474 aaPredicted RBP28.43■■■□□ 2.14
SRM-201ENST00000376957 C21orf2O43822 256 aa28.42■■■□□ 2.14
SRM-201ENST00000376957 NTSR2O95665 410 aa28.42■■■□□ 2.14
SRM-201ENST00000376957 TRMT112Q9UI30 125 aaKnown RBP28.42■■■□□ 2.14
SRM-201ENST00000376957 C9orf131Q5VYM1 1079 aa28.41■■■□□ 2.14
SRM-201ENST00000376957 NLRP10Q86W26 655 aa28.41■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms