RNA–Protein interactions for RNA: ENST00000376862.3

SYNDIG1-201, Transcript of synapse differentiation inducing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNDIG1, Length 2,522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNDIG1-201ENST00000376862 ZNF215Q9UL58 517 aaPredicted RBP26.14■■□□□ 1.78
SYNDIG1-201ENST00000376862 SPG7Q9UQ90 795 aa26.14■■□□□ 1.78
SYNDIG1-201ENST00000376862 LRRFIP2Q9Y608 721 aaKnown RBP26.14■■□□□ 1.78
SYNDIG1-201ENST00000376862 EDC4Q6P2E9 1401 aaKnown RBP26.14■■□□□ 1.77
SYNDIG1-201ENST00000376862 ARHGAP30Q7Z6I6 1101 aaPredicted RBP26.14■■□□□ 1.77
SYNDIG1-201ENST00000376862 COG3Q96JB2 828 aa26.14■■□□□ 1.77
SYNDIG1-201ENST00000376862 DACT1Q9NYF0 836 aa26.14■■□□□ 1.77
SYNDIG1-201ENST00000376862 USP27XA6NNY8 438 aa26.13■■□□□ 1.77
SYNDIG1-201ENST00000376862 FERMT3Q86UX7 667 aa26.13■■□□□ 1.77
SYNDIG1-201ENST00000376862 ERICH4A6NGS2 130 aa26.13■■□□□ 1.77
SYNDIG1-201ENST00000376862 GNAI3P08754 354 aa26.13■■□□□ 1.77
SYNDIG1-201ENST00000376862 CDK11BP21127 795 aaKnown RBP26.13■■□□□ 1.77
SYNDIG1-201ENST00000376862 CRB1P82279 1406 aa26.12■■□□□ 1.77
SYNDIG1-201ENST00000376862 TDRD7Q8NHU6 1098 aaKnown RBP26.12■■□□□ 1.77
SYNDIG1-201ENST00000376862 KRT85P78386 507 aa26.12■■□□□ 1.77
SYNDIG1-201ENST00000376862 PI4K2BQ8TCG2 481 aa26.12■■□□□ 1.77
SYNDIG1-201ENST00000376862 ST7Q9NRC1 585 aa26.12■■□□□ 1.77
SYNDIG1-201ENST00000376862 FAM53CQ9NYF3 392 aa26.12■■□□□ 1.77
SYNDIG1-201ENST00000376862 CWC27Q6UX04 472 aaKnown RBP26.11■■□□□ 1.77
SYNDIG1-201ENST00000376862 NECAB1Q8N987 351 aa26.11■■□□□ 1.77
SYNDIG1-201ENST00000376862 PDRG1Q9NUG6 133 aa26.11■■□□□ 1.77
SYNDIG1-201ENST00000376862 EIF4A2Q14240 407 aaKnown RBP26.11■■□□□ 1.77
SYNDIG1-201ENST00000376862 FBXO38Q6PIJ6 1188 aa26.11■■□□□ 1.77
SYNDIG1-201ENST00000376862 ADCK5Q3MIX3 580 aa26.1■■□□□ 1.77
SYNDIG1-201ENST00000376862 TIGD1Q96MW7 591 aa26.1■■□□□ 1.77
SYNDIG1-201ENST00000376862 CDC37L1Q7L3B6 337 aa26.1■■□□□ 1.77
SYNDIG1-201ENST00000376862 ALKQ9UM73 1620 aa26.09■■□□□ 1.77
SYNDIG1-201ENST00000376862 RBM6P78332 1123 aaKnown RBP26.09■■□□□ 1.77
SYNDIG1-201ENST00000376862 ARID5BQ14865 1188 aa26.09■■□□□ 1.77
SYNDIG1-201ENST00000376862 DDX54Q8TDD1 881 aaKnown RBP26.09■■□□□ 1.77
SYNDIG1-201ENST00000376862 JAKMIP1Q96N16 626 aaKnown RBP26.09■■□□□ 1.77
SYNDIG1-201ENST00000376862 DNAJC25Q9H1X3 360 aa26.09■■□□□ 1.77
SYNDIG1-201ENST00000376862 CPS1P31327 1500 aa26.09■■□□□ 1.77
SYNDIG1-201ENST00000376862 ELF2Q15723 593 aa26.09■■□□□ 1.77
SYNDIG1-201ENST00000376862 ME3Q16798 604 aa26.08■■□□□ 1.77
SYNDIG1-201ENST00000376862 TSPYL4Q9UJ04 414 aa26.08■■□□□ 1.77
SYNDIG1-201ENST00000376862 ELP1O95163 1332 aa26.08■■□□□ 1.77
SYNDIG1-201ENST00000376862 LARP1BQ659C4 914 aaKnown RBP26.08■■□□□ 1.76
SYNDIG1-201ENST00000376862 ZNF165P49910 485 aa26.07■■□□□ 1.76
SYNDIG1-201ENST00000376862 VPS53Q5VIR6 699 aa26.07■■□□□ 1.76
SYNDIG1-201ENST00000376862 LRRC8AQ8IWT6 810 aa26.07■■□□□ 1.76
SYNDIG1-201ENST00000376862 ZSCAN31Q96LW9 406 aaPredicted RBP26.07■■□□□ 1.76
SYNDIG1-201ENST00000376862 SH2B1Q9NRF2 756 aaPredicted RBP26.07■■□□□ 1.76
SYNDIG1-201ENST00000376862 SOS1Q07889 1333 aaPredicted RBP26.06■■□□□ 1.76
SYNDIG1-201ENST00000376862 TTC21AQ8NDW8 1320 aa26.06■■□□□ 1.76
SYNDIG1-201ENST00000376862 CLSTN2Q9H4D0 955 aa26.06■■□□□ 1.76
SYNDIG1-201ENST00000376862 CCDC171Q6TFL3 1326 aa26.06■■□□□ 1.76
SYNDIG1-201ENST00000376862 FLIIQ13045 1269 aa26.06■■□□□ 1.76
SYNDIG1-201ENST00000376862 PTPN14Q15678 1187 aa26.06■■□□□ 1.76
SYNDIG1-201ENST00000376862 XRN1Q8IZH2 1706 aaKnown RBP26.05■■□□□ 1.76
SYNDIG1-201ENST00000376862 PTH1RQ03431 593 aa26.05■■□□□ 1.76
SYNDIG1-201ENST00000376862 RBM43Q6ZSC3 357 aaKnown RBP26.05■■□□□ 1.76
SYNDIG1-201ENST00000376862 NYAP1Q6ZVC0 841 aa26.05■■□□□ 1.76
SYNDIG1-201ENST00000376862 CNTROBQ8N137 903 aa26.05■■□□□ 1.76
SYNDIG1-201ENST00000376862 TFIP11Q9UBB9 837 aaKnown RBP26.05■■□□□ 1.76
SYNDIG1-201ENST00000376862 ERBB3P21860 1342 aa26.05■■□□□ 1.76
SYNDIG1-201ENST00000376862 NRKQ7Z2Y5 1582 aa26.05■■□□□ 1.76
SYNDIG1-201ENST00000376862 GOLGA6L4A6NEF3 574 aa26.05■■□□□ 1.76
SYNDIG1-201ENST00000376862 PRPF40BQ6NWY9 871 aaKnown RBP26.05■■□□□ 1.76
SYNDIG1-201ENST00000376862 NECTIN2Q92692 538 aa26.05■■□□□ 1.76
SYNDIG1-201ENST00000376862 STK31Q9BXU1 1019 aa26.05■■□□□ 1.76
SYNDIG1-201ENST00000376862 FOXO3O43524 673 aa26.04■■□□□ 1.76
SYNDIG1-201ENST00000376862 DDX19AQ9NUU7 478 aaKnown RBP26.04■■□□□ 1.76
SYNDIG1-201ENST00000376862 CYP46A1Q9Y6A2 500 aa26.04■■□□□ 1.76
SYNDIG1-201ENST00000376862 NCKAP5LQ9HCH0 1330 aa26.04■■□□□ 1.76
SYNDIG1-201ENST00000376862 IPO4Q8TEX9 1081 aaKnown RBP26.04■■□□□ 1.76
SYNDIG1-201ENST00000376862 ERO1AQ96HE7 468 aa26.04■■□□□ 1.76
SYNDIG1-201ENST00000376862 ZNF446Q9NWS9 450 aa26.04■■□□□ 1.76
SYNDIG1-201ENST00000376862 SURF6O75683 361 aaKnown RBP26.03■■□□□ 1.76
SYNDIG1-201ENST00000376862 CDC25BP30305 580 aa26.03■■□□□ 1.76
SYNDIG1-201ENST00000376862 SPATA32Q96LK8 384 aa26.03■■□□□ 1.76
SYNDIG1-201ENST00000376862 ZSWIM6Q9HCJ5 1215 aa26.03■■□□□ 1.76
SYNDIG1-201ENST00000376862 NR1I2O75469 434 aa26.03■■□□□ 1.76
SYNDIG1-201ENST00000376862 ARHGEF10O15013 1369 aa26.02■■□□□ 1.76
SYNDIG1-201ENST00000376862 TRMT1Q9NXH9 659 aaKnown RBP26.02■■□□□ 1.76
SYNDIG1-201ENST00000376862 TPCN1Q9ULQ1 816 aa26.02■■□□□ 1.76
SYNDIG1-201ENST00000376862 NPHP1O15259 732 aa26.02■■□□□ 1.76
SYNDIG1-201ENST00000376862 MAPK8IP2Q13387 824 aaPredicted RBP26.02■■□□□ 1.76
SYNDIG1-201ENST00000376862 RHPN1Q8TCX5 695 aa26.02■■□□□ 1.76
SYNDIG1-201ENST00000376862 USP44Q9H0E7 712 aa26.02■■□□□ 1.76
SYNDIG1-201ENST00000376862 CALCOCO1Q9P1Z2 691 aa26.02■■□□□ 1.76
SYNDIG1-201ENST00000376862 SSH3Q8TE77 659 aa26.01■■□□□ 1.75
SYNDIG1-201ENST00000376862 SKILP12757 684 aa26■■□□□ 1.75
SYNDIG1-201ENST00000376862 DLC1Q96QB1 1528 aa26■■□□□ 1.75
SYNDIG1-201ENST00000376862 LEO1Q8WVC0 666 aaPredicted RBP26■■□□□ 1.75
SYNDIG1-201ENST00000376862 NPHP3Q7Z494 1330 aa26■■□□□ 1.75
SYNDIG1-201ENST00000376862 UBTFL1P0CB47 393 aaPredicted RBP25.99■■□□□ 1.75
SYNDIG1-201ENST00000376862 CAPN2P17655 700 aa25.99■■□□□ 1.75
SYNDIG1-201ENST00000376862 SLFNL1Q499Z3 407 aa25.99■■□□□ 1.75
SYNDIG1-201ENST00000376862 KIF1BPQ96EK5 621 aa25.99■■□□□ 1.75
SYNDIG1-201ENST00000376862 SCAND2PQ9GZW5 306 aaPredicted RBP25.99■■□□□ 1.75
SYNDIG1-201ENST00000376862 AGLP35573 1532 aa25.99■■□□□ 1.75
SYNDIG1-201ENST00000376862 RAB11FIP3O75154 756 aa25.98■■□□□ 1.75
SYNDIG1-201ENST00000376862 SLU7O95391 586 aaKnown RBP25.98■■□□□ 1.75
SYNDIG1-201ENST00000376862 PPP1R42Q7Z4L9 355 aa25.98■■□□□ 1.75
SYNDIG1-201ENST00000376862 BICD2Q8TD16 824 aa25.98■■□□□ 1.75
SYNDIG1-201ENST00000376862 TM6SF1Q9BZW5 370 aa25.98■■□□□ 1.75
SYNDIG1-201ENST00000376862 COL9A3Q14050 684 aaPredicted RBP25.97■■□□□ 1.75
SYNDIG1-201ENST00000376862 PGBD1Q96JS3 809 aa25.97■■□□□ 1.75
SYNDIG1-201ENST00000376862 TULP2O00295 520 aa25.97■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms